Naga_100042g39, gene1211 (gene) Nannochloropsis gaditana

Overview
NameNaga_100042g39
Unique Namegene1211
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:161841..167572 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100042g39
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:161841..167572 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL090ngnoL090Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G04890NO01G04890Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1257rna1257-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1257rna1257Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1257

>rna1257-protein ID=rna1257-protein|Name=rna1257|organism=Nannochloropsis gaditana|type=polypeptide|length=1050bp
MAVSLRLGRPGVRSKLLGLLLENMQVSAANAFALKGRINGILAHLRRLVL
DELREGTSGEPSPGTLRGKGRRGPRDSDAIPGPSTVRVALTLYAHLLELD
LLCDFWVESSDDTSRSSSSDRDTEPSSRTFSTHGSFVKAVVKHISSLVGC
RKVVDMLVVSRLYQLLVEKGGPPDGWGRESALALGEHVEDKEERDLVACL
FQAQPGNGDQTIGDDGNAGNRDGWQRNLAILGPSLPLWAWYCGKEHLDTF
WHSIFSDSYSATRNLTSCHSRPSIRLLTDASFYEISPLACRCIPAWSFYV
WESLASMRPGSTPKKGLQQLKGWMERGGVTSLAMATEYACFLSAPTSVGK
TKRATSPVEKERNPFVKEWVKYTQDDSNESLARAVHLCRLLNSLPSEYLP
SEQAPLRFLFSVFISCGITRNPTSTGRHILALALATSATQALQSSPQEIF
PLINNSTHIFEQWFLPVVLSRSAPSLSSSSVPSSAGDEVGLSLLKNYIAS
FLLRPGNVPTEGGMHVNGAKGQGQEKAMTRLVSCLLKDKLLPLLEKHPGS
NGSDDDSDLAHALRLIQALLAPYLSKEGMDASMEGIDGREDILNLAASRL
GPAAARHLPFSASSEVFLVLADLMKLVGQNTSEGDALTPAGARRQGSFKL
PSHTVLQVLKPGKTGNMCTRASSLKLVAAYLQYGMREEDFAQEGAILEAM
VDFAMHVPSASKTPATAFEARQAHFLATAIENTRGGSSVQGQALHRLIDC
MYAAQEAFLSRPAGRSRAAVTDTLRRACCFFERLVEAADSREGPAVEAIR
LVAQDFLGLASSLVTVLMTRLLDREAPPASNLLSQSELDACLSKVLGVLR
LFVRKRWLFPSGSGMRVEDVGRILAPVSALIPVMHRVGGKTGEQLDEVPP
AEGPFAGICNLLSTLLKLHPRLVSQSAPPFFLVARALFRLLVVKKTSGNG
PYGELGAVKAWVRLIEHIAGQATLLRKHLMMLLVDYLSVYPYLGVEDKEV
LQTGAFALIDALNSSEVQHMNAALLDPVGQALLKKLYSEYQQQYKFRGKV
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Synonyms
Publications