Naga_100006g46, gene1080 (gene) Nannochloropsis gaditana

Overview
NameNaga_100006g46
Unique Namegene1080
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1238471..1242705 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100006g46
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1238471..1242705 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL053ngnoL053Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G01140NO03G01140Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1121rna1121-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1121rna1121Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1121

>rna1121-protein ID=rna1121-protein|Name=rna1121|organism=Nannochloropsis gaditana|type=polypeptide|length=1293bp
MGDKYIRTSISFEHLIDDPGWMPYFLDFLSKHGQSHLLLFWLEVEVFELA
AGGGPSLVTQATRIYESYLGEGAPKRIDVPDVMLTFLEGEITSGAPNINV
FAAVHAFVFRRLHQTWYPAFLLSTTYRSLLVHLKNSFRTPLKEVLLDEVQ
SRYIEAFLLNSTSPTGPCTVGNVYLWKKIQHDLRPLGARLSRDRLVGPAG
DARNANDLRTFIMDAKAVYEAYIQPSPQVGVSGGPSLSSRSFSGQGYEGG
GRQRDAPSATALGPELRYSIAECLGRLASQSRYYSGVGTGGIGQIDRSII
GELNTYLIEAQRVILAWLEAEVYPSFLESNLVGILSGEIQSQRSAPLRRK
KRLRTLFKSVRSFRHVYVPPCPRSEGRGLVLVSTEDVFRKPEPLTHEFVW
AFDVAVFPVDLTAGRALRAADLRTDVGRRESEVDGEGGEKEDAGVRSPGG
EESNGAVGGAILCSKNEDGDSGFFHLDEPVPNSKGTSLGQEEEQGHRKKA
KRPLHFSSAVRSSQVLGLPKPSVYGSNDVAGADTATEDKEDVATSLCAAI
ETRLVREIQRLAFPSLCLMPLERSTFVLFSPKLVVPEATLHHFVLPISRK
DVDPELRRDIRSADGRDLASSLGNRSPSPFVASPRVAVRSPSGEGELAPP
DLKADQSIDLYGACLMEWAPAGADVLLPRCVVLVSTEPRVASLRRAVVRM
RESMGQPGVGGSPIMPDTPKKTPWQLEDEQLRQQSERVQTMLDTSLFAPA
RGGKRSERPTDFQKTDAGDKTDAEESAAYWLRAWKKTGMAASASTVLFSP
KRAPTTNSGLSVPDPAATSSSSSSCPLPPPLLTSLPLHVDASFFPLIQAL
SPEILLKAFTAVLLERPMVVKSSSRTLTMVACEGLRRLIYPFAWLLPYKP
LLPVGGVCSFWDDVKRSAGGRSWYDYVFEEDGLDESLMRIAGRRSYAEPM
TASSAMRQVPGFLVGIETCIVDAALTATKIVSPAYSDGDGDSANSSSGCH
AWACATCDVHEMGVFSGMDGVPSFDVDSPFSPGHPSPLSTRSMPLSTRGQ
GGHGLSPSGVATAGHAARNTSTTKYGELPPCVRASTRELLASAFIVDLDN
DCVEGPRRGDPATATLPVLPEAAVCTLLTSIQQLVNPSMGSPTGAGNGDA
LGYGYHAVHVARSTDAKKSNHESMLRNGSAAPSSEETKSKDNAMKNVTGN
VQLHAAFVTFFRQLLLDRYREYTLSYLEEQMVAFHADSFLASQPEPTHAF
WTDMFQTRLFAYFLLVEHQRVAASFREPDRETPPDGAVETMDV
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Synonyms
Publications