Naga_100006g67, gene1060 (gene) Nannochloropsis gaditana

Overview
NameNaga_100006g67
Unique Namegene1060
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1177615..1180694 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100006g67
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1177615..1180694 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL053ngnoL053Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G01300NO03G01300Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1100rna1100-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1100rna1100Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1100

>rna1100-protein ID=rna1100-protein|Name=rna1100|organism=Nannochloropsis gaditana|type=polypeptide|length=828bp
MADKRKLQTEIDRILKKVDEGVELFDEIWKKVYSARDPNHKEKYEQDLKK
EIKKLQRHRDQIKTWLGQNDIKDKKNLTEARKLIESKMEQFKVCEKEAKT
KNFSKEGLAREQKVDPKEAAKNRTREWLGAAVNKLNNQIESFDADLERLM
AGKGKNKNKEEIATLEESMGCHKQHVAKLEQIIRLMDNDLREPEMIEKCK
EDIEFFVEAHEDGQYESQYDDDMEMYDILELDEAPIQITDLLSQGGGPKK
SPRDGEEGEEDGSLGGMSGGGEEDDVDRSTSSKTSGSSNGASKEKRGTSA
QAGAVGAVGGGAGGTPELKGIGRPGKVQFNSTPTVVRAVGGAAPRPGLGG
NKATSVGSTGTTGPRLTASAVVAGTGPSPGKPTAAQALRGNLAAAVVGGG
TGVPDGATAGTTPATAAAILARDKTAQSAMQPPQQPQQTPQQPLPSQRLL
PLRQQQALAAQQQQLAQQQAAQQQALMERQKNLQQQQQQQQQQQQQQQQM
TVRPSAFVPPASAASKSSPLPQGSSSPMTGSQQSTPPLRSAPAPSTTQQQ
QQQGTAPHRGSLGAEQPIQQQQQQQQQQQQQQQQQHFQQQQPQNKQQYQQ
QLHREQPPQQQEQQQQEQNKQQSQQRQQLAQGPLTQPAEHAFGGGPGSAV
ATGGGGGEPAMDATAAASFSSNASRTAPETLQMQLTYLSRAMQYIPTQHD
AERPKQYFPRNPYPVHSSFPLVPAPIFDSPSIFKKLGPDTLFFIFYYQQG
TYQQYLAAKELKEQSWRFHKKYMTWFQRHEEPQVTTEDYEQGTYVYFDCE
SGWCTRIKQAFRFDYSALENDEPRGGEN
back to top
Synonyms
Publications