NO30G01330, NO30G01330 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO30G01330 vs. NCBI_GenBank
Match: XP_005852523.1 (hypothetical protein NGA_0715610 [Nannochloropsis gaditana CCMP526] >EKU23309.1 hypothetical protein NGA_0715610 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 237.3 bits (604), Expect = 2.000e-58 Identity = 147/295 (49.83%), Postives = 174/295 (58.98%), Query Frame = 0 Query: 23 VTASMTRSVHAPVASSRIGAAGLWLERCQLALAARYHDEDSASFCMDMMPRTNRYQAXXXXXXXXXXRTREGRWRLRGGQQLG-----QQWTWK---------------MHKXXXXXXXXXXXXXXXXXXXXXXXXXHQWRRKLRIRRSQGGMGGALDTDPKGFSEFREVKDFFNLGLSLLCVLFAALASGLTIGLLSLDTLDLEIKQRVGTTAEQKHATVLLPLLAHRHLLLVTLLLFNSLAAEALPLTLGELVPGYLAVILSVTAVLFFGEILPAAVFSGPNQLKLAARMTGL 298 V A ++ +H A W+++C+ ALA RY D +A FC D++ R G + L LG WT + M + RR LR++ S MGG LDTD +GFSEF+EVKDF NLGL+L+CVLFAALASGLTIGLLS+DTLDLEIKQR GT ++ HA +LPLLAHRHLLLVTLLLFNS+AAEALPL LGELVPGY+AVILSVTAVLFFGEILP+AVF GPNQLKL +RMT L Sbjct: 8 VIAILSCGIHTSAFPRGDDVASQWMDKCEAALARRYQDSQAAPFCNDLL-------RHIFIIVSPKIGDRSGNYDLEAVDTLGIVMTSHSWTEEGAAGTRKPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKPLPGRRSLRVKHS-SSMGGPLDTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPGYVAVILSVTAVLFFGEILPSAVFLGPNQLKLGSRMTPL 294
BLAST of NO30G01330 vs. NCBI_GenBank
Match: XP_005855914.1 (hypothetical protein NGA_0715620, partial [Nannochloropsis gaditana CCMP526] >EKU20458.1 hypothetical protein NGA_0715620, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 228.8 bits (582), Expect = 7.200e-56 Identity = 142/287 (49.48%), Postives = 168/287 (58.54%), Query Frame = 0 Query: 23 VTASMTRSVHAPVASSRIGAAGLWLERCQLALAARYHDEDSASFCMDMMPRTNRYQAXXXXXXXXXXRTREGRWRLRGGQQLG-----QQWTWK---------------MHKXXXXXXXXXXXXXXXXXXXXXXXXXHQWRRKLRIRRSQGGMGGALDTDPKGFSEFREVKDFFNLGLSLLCVLFAALASGLTIGLLSLDTLDLEIKQRVGTTAEQKHATVLLPLLAHRHLLLVTLLLFNSLAAEALPLTLGELVPGYLAVILSVTAVLFFGEILPAAVFSGPNQLK 290 V A ++ +H A W+++C+ ALA RY D +A FC D++ R G + L LG WT + M + RR LR++ S MGG LDTD +GFSEF+EVKDF NLGL+L+CVLFAALASGLTIGLLS+DTLDLEIKQR GT ++ HA +LPLLAHRHLLLVTLLLFNS+AAEALPL LGELVPGY+AVILSVTAVLFFGEILP+AVF GPNQLK Sbjct: 8 VIAILSCGIHTSAFPRGDDVASQWMDKCEAALARRYQDSQAAPFCNDLL-------RHIFIIVSPKIGDRSGNYDLEAVDTLGIVMTSHSWTEEGAAGTRKPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKPLPGRRSLRVKHS-SSMGGPLDTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVPGYVAVILSVTAVLFFGEILPSAVFLGPNQLK 286
BLAST of NO30G01330 vs. NCBI_GenBank
Match: EWM20735.1 (protein of unknown function DUF21 [Nannochloropsis gaditana]) HSP 1 Score: 177.2 bits (448), Expect = 2.500e-40 Identity = 114/256 (44.53%), Postives = 138/256 (53.91%), Query Frame = 0 Query: 23 VTASMTRSVHAPVASSRIGAAGLWLERCQLALAARYHDEDSASFCMDMMPRTNRYQAXXXXXXXXXXRTREGRWRLRGGQQLG-----QQWTWK---------------MHKXXXXXXXXXXXXXXXXXXXXXXXXXHQWRRKLRIRRSQGGMGGALDTDPKGFSEFREVKDFFNLGLSLLCVLFAALASGLTIGLLSLDTLDLEIKQRVGTTAEQKHATVLLPLLAHRHLLLVTLLLFNSLAAEALPLTLGELVP 259 V A ++ +H A W+++C+ ALA RY D +A FC D++ R G + L LG WT + M + RR LR++ S MGG LDTD +GFSEF+EVKDF NLGL+L+CVLFAALASGLTIGLLS+DTLDLEIKQR GT ++ HA +LPLLAHRHLLLVTLLLFNS+AAEALPL LGELVP Sbjct: 8 VIAILSCGIHTSAFPRGDDVASQWMDKCEAALARRYQDSQAAPFCNDLL-------RHIFIIVSPKIGDRSGNYDLEAVDTLGIVMTSHSWTEEGAAGTRKPKRPERPDMREEPQTLALPTGRNNEAKVDEKEEEKPLPGRRSLRVKHS-SSMGGPLDTDSRGFSEFKEVKDFVNLGLALICVLFAALASGLTIGLLSIDTLDLEIKQRAGTPTDKHHAAAILPLLAHRHLLLVTLLLFNSMAAEALPLALGELVP 255
BLAST of NO30G01330 vs. NCBI_GenBank
Match: XP_005855903.1 (magnesium and cobalt efflux protein, partial [Nannochloropsis gaditana CCMP526] >EKU20447.1 magnesium and cobalt efflux protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 164.9 bits (416), Expect = 1.300e-36 Identity = 88/134 (65.67%), Postives = 107/134 (79.85%), Query Frame = 0 Query: 162 DPKGFSEFREVKDFFNLGLSLLCVLFAALASGLTIGLLSLDTLDLEIKQRVGTTAEQKHATVLLPLLAHRHLLLVTLLLFNSLAAEALPLTLGELVPGYLAVILSVTAVLFFGEILPAAVFSGPNQLKLAARMT 296 D GF+ F+ + +LGL+ CV+ AA+ASGLTIGL+S++ L+LEIK+R+GT E+ A LLPLL RHLLLVTLLLFN+ AAEALPL L LVPGY+AVILSVTAVLFFGEI P+A+F GPNQLKL +RMT Sbjct: 191 DSNGFATFQTPSSWIHLGLAFACVMAAAIASGLTIGLMSIEPLELEIKERIGTVEERSQAHRLLPLLNRRHLLLVTLLLFNAAAAEALPLFLDALVPGYIAVILSVTAVLFFGEIFPSAIFMGPNQLKLGSRMT 324
BLAST of NO30G01330 vs. NCBI_GenBank
Match: EWM26637.1 (protein mam3 [Nannochloropsis gaditana]) HSP 1 Score: 154.8 bits (390), Expect = 1.300e-33 Identity = 77/135 (57.04%), Postives = 109/135 (80.74%), Query Frame = 0 Query: 162 DPKGFSEFREVKDFFNLGLSLLCVLFAALASGLTIGLLSLDTLDLEIKQRVGTTAEQKHATVLLPLLAHRHLLLVTLLLFNSLAAEALPLTLGELVPGYLAVILSVTAVLFFGEILPAAVFSGPNQLKLAARMTG 297 D G+++ R++ ++ LG +++CV+ AA A+GLT+GL+SLD L+LE+K+RVGT E+KHA + PL+A H LLVTLLLFNS+A EALP+ L LVPGY+AV+LSVTA+L FGEI+P+A+F+GPNQ+ +AA +G Sbjct: 6 DNAGYADMRDIGSWYQLGGAVVCVICAAFAAGLTVGLMSLDPLELEVKRRVGTPEERKHAEKICPLIAPHHRLLVTLLLFNSIANEALPIFLSGLVPGYVAVLLSVTAILIFGEIIPSAIFTGPNQIIMAAHFSG 140
BLAST of NO30G01330 vs. NCBI_GenBank
Match: EWM20734.1 (protein of unknown function DUF21 [Nannochloropsis gaditana]) HSP 1 Score: 152.1 bits (383), Expect = 8.600e-33 Identity = 205/649 (31.59%), Postives = 269/649 (41.45%), Query Frame = 0 Query: 162 DPKGFSEFREVKDFFNLGLSLLCVLFAALASGLTIGLLSLDTLDLEIKQRVGTTAEQKHATVLLPLLAHRHLLLVTLLLFNSLAAEALPLTLGELVPGYLAVILSVTAVLFFGEILPAAVFSGPNQLKLAARMTGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKRYSRGELMALIEIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPITAVAPEA-STPRPEGAGAGPGADSSLLLSLPPALPTTPCHSSSVSEGASPSRPLHTPFSISSSLPSSYYISSLA--------------------RAQADHPQIPLLHLNPSSLPPSPPPSLLTHREVSLVLAALSLADKKVAESMTPWADV--FALTLPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE---------GGLR---VRDPLLVSPLCPLLDLLEAFQQGKANVAVVVDPAIDPPEQAASRLL------SGL-PLLSEPLGLITLQDVLAALLQEDIIEE 769 D GF+ F+ + +LGL+ CV+ AA+ASGLTIGL+S++ L+LEIK+R+GT E+ A LLPLL RHLLLVTLLLFN+ AAEALPL L LVPGY+AVILSVTAVLFFGEI P+A+F GPNQLKL +RMT + KRYSR EL AL+EIH A EA +TP GA P S L+L PA TP S + + P L + ++++ P S L + Q+ H P+ + PP+P +LL+ REV +V+ L +++K VA+ M PW V A+ P XXXXXXXXXXXXXXXXXXXXXXXXXX E G ++ VR P++V+P CPL+D+L FQ G A++A+V + PE+ + LL GL P P+G+ITL+DV+ +LQ +I +E Sbjct: 206 DSNGFATFQTPSSWIHLGLAFACVMAAAIASGLTIGLMSIEPLELEIKERIGTVEERSQAHRLLPLLNRRHLLLVTLLLFNAAAAEALPLFLDALVPGYIAVILSVTAVLFFGEIFPSAIFMGPNQLKLGSRMTPV-------------------------------------VWCLICFFFPIACPIAWCLDRFLGDEHGHGKRYSREELSALMEIHLKQRRGGKNGDK-------------------------------------------------------------------------------ADEAQATP-----GATPSLVPSSSLALAPAGKRTPALLSLHTASSFPPSALASHALLANASPLSPPEVRLEEDAQEGVKKGRRTKKGKKHNQGQSSHSPGPVPPAAGAFAPPAPHSTLLSKREVDIVVGVLQISNKVVADCMVPWTSVCCLAVDAPLNEETLKAIRAAGFSRLPVCFRQGGGKEXXXXXXXXXXXXXXXXXXXXXXXXXXEWREGRRGEGWVGKREAASVCGYVLTKSLIEVDPHAGLTVGAMKKRLVRCPIVVAPSCPLIDILSTFQLGHAHLALV----SEAPEETLACLLGKGEGEGGLTPERIAPVGIITLEDVMEMMLQTEIWDE 729
BLAST of NO30G01330 vs. NCBI_GenBank
Match: CBJ32337.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 139.4 bits (350), Expect = 5.700e-29 Identity = 78/144 (54.17%), Postives = 106/144 (73.61%), Query Frame = 0 Query: 154 GMGGALDTDPKGFSEFREVKDFFNLGLSLLCVLFAALASGLTIGLLSLDTLDLEIKQRVGTTAEQKHATVLLPLLAHRHLLLVTLLLFNSLAAEALPLTLGELVPGYLAVILSVTAVLFFGEILPAAVFSGPNQLKLAARMTGL 298 G GAL+ + F + + N+ ++ +CV+ A LA+GLT+GLLS++ L++ IKQR GT EQ+ A+ +LPL++ H LLVTLLLFNSLA EALP+ LG LVP +LAVILSV+ VLFFGEI P+AVF+G NQL +A+ M+ L Sbjct: 188 GSAGALEFGEEDFLQIEST--WVNIAMTSVCVVCAGLAAGLTMGLLSIEPLEMAIKQRSGTPEEQQQASRILPLVSRHHFLLVTLLLFNSLANEALPIFLGNLVPSWLAVILSVSLVLFFGEIFPSAVFTGKNQLAIASGMSWL 329
BLAST of NO30G01330 vs. NCBI_GenBank
Match: GAX28949.1 (hypothetical protein FisN_20Lh274 [Fistulifera solaris]) HSP 1 Score: 123.2 bits (308), Expect = 4.300e-24 Identity = 71/124 (57.26%), Postives = 94/124 (75.81%), Query Frame = 0 Query: 175 FFNLGLSLLCVLFAALASGLTIGLLSLDTLDLEIKQRVGTTAEQ-KHATVLLPLLAHRHLLLVTLLLFNSLAAEALPLTLGELVPGYLAVILSVTAVLFFGEILPAAVFSGPNQLKLAARMTGL 298 +FNL + CV AA+A+GLT+G+L++D L L IK+R G T E+ K A+ LLP++ H LLVTLLL NS+A EALP+ L LVP +A++LSVT VLFFGEI+P+A+F+GPNQLKLA R+ L Sbjct: 84 YFNLLAAGFCVSLAAVAAGLTLGMLAMDPLMLLIKERAGETEEERKMASTLLPIVNQHHRLLVTLLLMNSIANEALPIFLEALVPPSVAILLSVTMVLFFGEIIPSAIFTGPNQLKLAHRLVPL 207
BLAST of NO30G01330 vs. NCBI_GenBank
Match: XP_009038700.1 (hypothetical protein AURANDRAFT_29051 [Aureococcus anophagefferens] >EGB06522.1 hypothetical protein AURANDRAFT_29051 [Aureococcus anophagefferens]) HSP 1 Score: 121.3 bits (303), Expect = 1.600e-23 Identity = 69/127 (54.33%), Postives = 93/127 (73.23%), Query Frame = 0 Query: 173 KDFFNLGLSLLCVLFAALASGLTIGLLSLDTLDLEIKQRVGTTAEQKHATVLLPLLAHR--HLLLVTLLLFNSLAAEALPLTLGELVPGYLAVILSVTAVLFFGEILPAAVFSGPNQLKLAARMTGL 298 + +L L+ C++ AALA+GLT+G++SLD LDL +K R GT +EQ A LLPL+ R H +LVTLLL NS A EALPL L +LVP + A+++SVTAVL FGEI P+A+F+GPN+L++AA L Sbjct: 8 RGLLDLALTATCIICAALAAGLTMGVVSLDPLDLRVKMRTGTKSEQACAARLLPLVDRRPHHQVLVTLLLLNSCANEALPLFLDKLVPSWAAIVISVTAVLVFGEIAPSALFTGPNKLQIAAAFAPL 134
BLAST of NO30G01330 vs. NCBI_GenBank
Match: GAX16052.1 (hypothetical protein FisN_20Hh274 [Fistulifera solaris]) HSP 1 Score: 120.9 bits (302), Expect = 2.100e-23 Identity = 70/124 (56.45%), Postives = 93/124 (75.00%), Query Frame = 0 Query: 175 FFNLGLSLLCVLFAALASGLTIGLLSLDTLDLEIKQRVGTTAEQ-KHATVLLPLLAHRHLLLVTLLLFNSLAAEALPLTLGELVPGYLAVILSVTAVLFFGEILPAAVFSGPNQLKLAARMTGL 298 + NL + CV AA+A+GLT+G+L++D L L IK+R G T E+ K A+ LLP++ H LLVTLLL NS+A EALP+ L LVP +A++LSVT VLFFGEI+P+A+F+GPNQLKLA R+ L Sbjct: 84 YLNLLAAGFCVSLAAVAAGLTLGMLAMDPLMLLIKERAGETEEERKMASTLLPIVNQHHRLLVTLLLMNSIANEALPIFLEALVPPSVAILLSVTMVLFFGEIIPSAIFTGPNQLKLAHRLVPL 207 The following BLAST results are available for this feature:
BLAST of NO30G01330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO30G01330 ID=NO30G01330|Name=NO30G01330|organism=Nannochloropsis oceanica|type=gene|length=4598bpback to top protein sequence of NO30G01330.2 >NO30G01330.2-protein ID=NO30G01330.2-protein|Name=NO30G01330.2|organism=Nannochloropsis oceanica|type=polypeptide|length=671bpback to top protein sequence of NO30G01330.1 >NO30G01330.1-protein ID=NO30G01330.1-protein|Name=NO30G01330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=964bpback to top Synonyms
Publications
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