NO30G01050, NO30G01050 (gene) Nannochloropsis oceanica

Overview
NameNO30G01050
Unique NameNO30G01050
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2069
Alignment locationchr30:387034..389102 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr30genomechr30:387034..389102 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO30G01050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR073ncniR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR098ngnoR098Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR097ngnoR097Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO30G01050.1NO30G01050.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO30G01050.1NO30G01050.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO30G01050 ID=NO30G01050|Name=NO30G01050|organism=Nannochloropsis oceanica|type=gene|length=2069bp
ATGTTAGCGAGTGGCGTCTTCGCTGCAAGCAAGTCGGCTCGCTCGGATGG
ATGGACTTGGCTGGCAGCAGTGACAAAGCACGACAAGCAAATGCCGTACA
AGGAGAGCATAGCCACAACTGTCAGTGGTACTGGAAATGAGAACAGTCTG
GATTGCCTGGCTTTGCTGGGCATCTCGACCTCCCCCTTTGCCTCCTGCCA
CGACCCAGTCACCTACGGCTCTAGGAGTCCTGGATATCATTGCATTGCTT
CTCGTCCATGCTTTACACCTGAGCCCAGCGTCGCCCAAgtacgtccatag
cagcagcagtatcaacagcaacagcaaaagcagcagcgtcactaccctga
caggaaggtctatgacagaggcgagacacggtaaaagggagagagggagc
gagggaggccacgaatgtgaatatgtgtatgtgtgtgtgtttgtgtgtgt
gtgtatgtcgcagggatgtcgtacactcaaatatatatgttagacaactg
aaacacgtttattgaagacaacttcctcaaacgtatgctgagcgacgcat
tttctccaattcttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgttgtgtgcgagcctcaccctctgctcggggg
gaggggaaacgaggaggagggagggagggagggagaggccccaatagtga
ccgagacttaatttatcttctttattcttacactaacagagatacggagg
cacacagagtgattaaaattgcacaagCGTCTCTTGGAGCCTCCCTCTCT
CCGATGGCACCAAAAgtaagcacgactctttccttctcccctccctcctt
ccctcccttgcttcctcgtgacttgttctctcttgttctctatgattatt
atattattagctctagctgactctcatttttacgattgagtggttgagga
gaaaatttaatataggactacgatgatatgagagaaccgcagtagatcca
tgtgtccctcctccctccctcccttccttttccacttctttccatttctt
gcgaaaggggcagacaagatggaaaagaaaaaagaggaggaaaaattgat
ggagggtggtgactgatttattctatttctctcttcttttacactacaag
GAGCAGCAGTAGGAGCCGGAGCAGCAGCAGCAGCAGAAGCAGCAGCAATT
ACAGCAGCAGGTGGAGGAAAACAATTAAAAAGgtgcgtttggaagaagaa
aagtaaagcgagagcaaggcaaggagggaaggaaggagggacggcaaggg
gcagtatgtgccgggtctcagtgacgaaaaacgtgttaaacagagcgttt
agcttggtgagataaacacaacctcctactcattccgaggatacccggac
agacacatacatatatctgttttttggtctacttagatacagatatagat
atgggtacagatatctatccatatctatctatctatctacctatttatct
atctatctatctatctatctatccatctattcatctatccatatctatcc
atctattcatcaacaatgtcgaggaggaggaaaggaggaaaaaatggaag
gaaggagggaaggaaggagggaaagaggaatggaggagggacagacaagt
cacttaaattgcttcaaacgaatacagGGCAACGACAAGAGCGCCGCCAT
TCCCCCCTCCTCTTCCTCCTCCTCCTCCTCCATCACCACCACCACATCTT
CCCTCTTCCTCCTCTTCCTCCTCCTCTTCCTCCTCCTTCTGCCACAGCAG
GAGATGGTAGTGCTCTCCTACGCTGGCGGCCATGGCGGCAAGCGAGCGCG
CCCTGCGCATCATCCACTTCGCCGAGGCCGATATTCCCGAGGAGAATCCC
AAAAAGCCCGACGAGCCCGCCTAGGCAGCCAGCGAGGAGAGCAGCCTCGG
CCCCCTCGCAAAAAAAAGGAAAAAAATATTGAGAAGGAGAATAAAACAAA
GAAAGACAATAGTGTATAA
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protein sequence of NO30G01050.1

>NO30G01050.1-protein ID=NO30G01050.1-protein|Name=NO30G01050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=250bp
MLASGVFAASKSARSDGWTWLAAVTKHDKQMPYKESIATTVSGTGNENSL
DCLALLGISTSPFASCHDPVTYGSRSPGYHCIASRPCFTPEPSVAQRLLE
PPSLRWHQKSSSRSRSSSSSRSSSNYSSRWRKTIKKGNDKSAAIPPSSSS
SSSSITTTTSSLFLLFLLLFLLLLPQQEMVVLSYAGGHGGKRARPAHHPL
RRGRYSRGESQKARRARLGSQRGEQPRPPRKKKEKNIEKENKTKKDNSV*
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Synonyms
Publications