NO30G01030, NO30G01030 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO30G01030 vs. NCBI_GenBank
Match: EWM26817.1 (Pectin lyase fold/virulence factor [Nannochloropsis gaditana]) HSP 1 Score: 191.0 bits (484), Expect = 1.900e-44 Identity = 96/194 (49.48%), Postives = 126/194 (64.95%), Query Frame = 0 Query: 128 VEGCTPKTGEELAFLVENTTCPVITLLPGATYILKQFIRVMPGRRVSVVGRPLNMPTIDAHRAYRSFTVEPGGFLDLRFIRLYRGKPIRIIRLYYYEIRGGGVYIRAGGTAIITSCLFTVNPILITEFLYTSSPVTTVRMLGGYLLMEAGTLTVTDSHFYVTRPGVLFREVYTVGGQVLIFAGNAIFTGCTFTS 322 V GCTP TG +L LVE +CPVITL PG Y+L + I V R V ++GRPL +P IDAH R+F+VE G LDLRF++++RG P+ ++ Y E+RGG +IR GG + T CL V+ + + L S T R+ GG+LL+EAGTL V D H + RPGVL REVYTVGG +L+ +GN TG T T+ Sbjct: 185 VHGCTPDTGVQLRSLVETGSCPVITLTPGVRYVLDEEIHVR--RAVVIIGRPLTLPVIDAHLIARAFSVEAKGRLDLRFVKVWRGVPMAVVDEVYLELRGGVAWIREGGEGVFTGCLMLVHDDEVGDVLLASDLRVTARLYGGFLLLEAGTLRVRDCHMLLQRPGVLLREVYTVGGYILVVSGNLFMTGSTMTA 376
BLAST of NO30G01030 vs. NCBI_GenBank
Match: EWM22289.1 (Pectin lyase fold/virulence factor [Nannochloropsis gaditana]) HSP 1 Score: 184.5 bits (467), Expect = 1.800e-42 Identity = 88/194 (45.36%), Postives = 126/194 (64.95%), Query Frame = 0 Query: 128 VEGCTPKTGEELAFLVENTTCPVITLLPGATYILKQFIRVMPGRRVSVVGRPLNMPTIDAHRAYRSFTVEPGGFLDLRFIRLYRGKPIRIIRLYYYEIRGGGVYIRAGGTAIITSCLFTVNPILITEFLYTSSPVTTVRMLGGYLLMEAGTLTVTDSHFYVTRPGVLFREVYTVGGQVLIFAGNAIFTGCTFTS 322 VEGCTPK EEL +++++TTCP +TL+P Y + + +++ RRV++VGRPL +P IDAH R+F VE GGFLD+RF+ + +GK + ++ L Y +RG YIR GG A+ T C F+ N FL + P T V++ GG ++ E+GTL VTD H + R G+ FRE+ VGG+ L+ GN TGC F + Sbjct: 6 VEGCTPKNAEELRYMIDHTTCPRLTLVPATNYSITE--QLVIRRRVTLVGRPLGLPIIDAHNTTRAFLVEAGGFLDVRFVEIVKGKFVEVVPLVLYRLRGPTCYIRRGGVALFTGCRFSANWRNAALFLGITPPQTNVQVFGGGIVAESGTLRVTDCHVFRPRIGIAFREIQFVGGEFLVLGGNMYLTGCIFVN 197
BLAST of NO30G01030 vs. NCBI_GenBank
Match: EWM25479.1 (hypothetical protein Naga_100207g1 [Nannochloropsis gaditana]) HSP 1 Score: 120.9 bits (302), Expect = 2.400e-23 Identity = 71/196 (36.22%), Postives = 108/196 (55.10%), Query Frame = 0 Query: 131 CTPKTGEELAFLVEN-TTCPVITLLPGATY---ILKQFIRVMPGRRVSVVGRPLNMPTIDAHRAYRSFTVEPGGFLDLRFIRLYRGKPIRIIRLYYYEIRGGGVYIRAGGTAIITSCLFT-VNPILITEFLYTSSPVTTVRMLGGYLLMEAGTLTVTDSHFYVTRPGVLFREVYTVGGQVLIFAGNAIFTGCTFTS 322 C P++G EL + E+ + C +I+LLPG Y + + R ++G P+++PTID + R F + GG LDL+F+R YRG I + +RGG + GG +FT P+ + L VR+ GG + + G +T+T SHF+V +PGVLFRE+Y VG +L+ AG A+ +G TFT+ Sbjct: 152 CVPQSGMELRQMAEDPSRCAIISLLPGKIYNVALPDSDDDITISTRKVIIGNPISLPTIDGADSKRIFHIVAGGNLDLQFVRTYRGGGELIATIPV--LRGGTALVELGGRFSAFGVIFTNAPPVGMPAILIAPDVSRAVRVFGGQVFVTGGIVTITLSHFWVLQPGVLFREIYVVGADLLVVAGVAVLSGVTFTN 345
BLAST of NO30G01030 vs. NCBI_GenBank
Match: EWM26475.1 (hypothetical protein Naga_100045g21 [Nannochloropsis gaditana]) HSP 1 Score: 99.0 bits (245), Expect = 9.800e-17 Identity = 63/208 (30.29%), Postives = 102/208 (49.04%), Query Frame = 0 Query: 131 CTPKTGEELAFLVENTTCPVITLL--PGATYILKQFIRVMPGRRVSVVGRPLNMPTIDAHRAYRSFTVEPGGFLDLRFIRLYRGKPI----------RIIRLYYYEIRGGGVYIRAGG-----TAIITSCLFTVNPILITEFLYTSSPVTTVRMLGGYLLMEAGTLTVTDSHFYVTRPGVLFREVYTVGGQVLIFAGNAIFTGCTFTS 322 C P+ EL VE CP++ L Y+L +M R V V+G P +PTIDA R+FT+ GGFL+L+++R+ +G + I +EI+GG V + G +I + T N + + + +T R+ GG++ + AGT+ + HF+ + + F + +G +L+ AGN TGCTFT+ Sbjct: 204 CWPRNIVELQIAVEEADCPLVVLTNPNPMAYMLMDMNEIMVMRHVRVLGHPALLPTIDAMMGMRAFTIMEGGFLELQYVRVRQGMGMYRDRYGLEGRDDISSKVFEIKGGSVMLEEGAEGANFVGVIFLAVMT-NQEMTEQAIQDQIDMTGWRIYGGHVYVTAGTVRFFNCHFWDSMILMPFTDQVAIGADILVLAGNVFVTGCTFTN 410
BLAST of NO30G01030 vs. NCBI_GenBank
Match: EWM27664.1 (hypothetical protein Naga_100125g7 [Nannochloropsis gaditana]) HSP 1 Score: 87.4 bits (215), Expect = 3.000e-13 Identity = 60/189 (31.75%), Postives = 86/189 (45.50%), Query Frame = 0 Query: 131 CTPKTGEELAFLVENTTCPVITLLPGATYILKQFIRVMPGRRVSVVGRPLNMPTIDAHRAYRSFTVEPGGFLDLRFIRLYRGKPIRIIRLYYYEIRGGGVYIRAGGTAIITSCLFTVNPILITEFLYTSSPVTTVRMLGGYLLMEAGTLTVTDSHFYVTRPGVLFREVYTVGGQVLIFAGNAIFTGCTF 320 C L V +T C V+ L+ G Y L + + V + +V+G P + P I+A A R+F V G D+R I Y G +IR GG +Y+ G CLFT+ P + E S+P + GG +LME G +T+ F+ PG + +GG VLI +G A T F Sbjct: 178 CLAHDTRRLMEAVNSTACDVVVLVAGHVYNLDRMMHVY--KPTTVIGNPADRPVINAAEAERAFLVHSGATFDVRHILFYEGDG-DLIRNEIRTRFGGAIYMSIGTRLFAFDCLFTIQP--VRESFINSAPEF---IFGGDILMEGGVMTLVGCSFFAVVPGFINSVSTELGGAVLILSGAATLTLVNF 358
BLAST of NO30G01030 vs. NCBI_GenBank
Match: XP_005854372.1 (hypothetical protein NGA_0163600, partial [Nannochloropsis gaditana CCMP526] >EKU21987.1 hypothetical protein NGA_0163600, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 85.1 bits (209), Expect = 1.500e-12 Identity = 68/259 (26.25%), Postives = 115/259 (44.40%), Query Frame = 0 Query: 103 PDAKNIITPGSAVVGQWTD------TRMGGLVEGCTPKTGEELAFLVENTTCPV--ITLLPGATYILKQFIRVMPGRRVSVVGRPLNMPTIDA---HRAYRSFTVEPGGFLDLRFIRLYRG------KPIRI-------------------IRLYYYEIRGGGVYIRAGGTAIITSCLFTVNPILITEFLYTSSPVTTV----RMLGGYLLMEAGTLTVTDSHFYVTRPGVLFREVYTVGGQVLIFAGNAIFTGCTFTS 322 P A N++T AV+ + +D ++ C P+T +EL V+ C + +T Y++ Q +M R + +VG P+ +P IDA + A R+F V GGFLDL++IR+ G +P+ + E RGG V I G + + ++ E + + T R GG++ + G++ T+ HF+ T + + +++GG +L+ AG T CTFTS Sbjct: 105 PPAPNLLTTAHAVLSKGSDRFSSKQQASSDQMDACYPQTADELVEAVQELDCSLLFLTNFDPQAYLITQ--HIMVDRPIRIVGHPVFLPVIDASTLNMAPRAFRVVEGGFLDLQYIRVRAGVGETKERPVSSNQTQAESAFGETSGTQQVGVTGKILETRGGSVAIEQGASGANFEGVIFLSVANSWESVQEAIQATYTGMGGRTYGGHIFIAGGSVKFTNCHFWTTAILLPLTDQFSLGGDILMLAGTLTVTACTFTS 361
BLAST of NO30G01030 vs. NCBI_GenBank
Match: EWM26075.1 (hypothetical protein Naga_100278g5 [Nannochloropsis gaditana]) HSP 1 Score: 79.3 bits (194), Expect = 8.000e-11 Identity = 61/228 (26.75%), Postives = 103/228 (45.18%), Query Frame = 0 Query: 128 VEGCTPKTGEELAFLVENTTCPVITLLPG--ATYILKQFIRVMPGRRVSVVGRPLNMPTIDA---HRAYRSFTVEPGGFLDLRFIRLYRG------KPIRI-------------------IRLYYYEIRGGGVYIRAGGTAIITSCLFTVNPILITEFLYTSSPVTTV----RMLGGYLLMEAGTLTVTDSHFYVTRPGVLFREVYTVGGQVLIFAGNAIFTGCTFTS 322 ++ C P+T +EL V+ C ++ L Y++ Q +M R + +VG P+ +P IDA + A R+F V GGFLDL++IR+ G +P+ + E RGG V I G + + ++ E + + T R GG++ + G++ T+ HF+ T + + +++GG +L+ AG T CTFTS Sbjct: 1 MDACYPQTADELVEAVQELDCSLLFLTNSDPQAYLITQ--HIMVDRPIRIVGHPVFLPVIDASTLNMAPRAFRVVEGGFLDLQYIRVRAGVGETKERPVSSNQTQAESAFGETSGTQQVGVTGKILETRGGSVAIEQGASGANFEGVIFLSVANSWESVQEAIQATYTGMGGRTYGGHIFIAGGSVKFTNCHFWTTAILLPLTDQFSLGGDILMLAGTLTVTACTFTS 226
BLAST of NO30G01030 vs. NCBI_GenBank
Match: EWM23493.1 (hypothetical protein Naga_100198g12 [Nannochloropsis gaditana]) HSP 1 Score: 76.6 bits (187), Expect = 5.200e-10 Identity = 65/200 (32.50%), Postives = 90/200 (45.00%), Query Frame = 0 Query: 124 MGGLVE-GCTPKTGEELAFLVENTTCPVITLLPGATYILKQFIRVMPGRRVSVVGRPLNMPTIDAHRAYRSFTVEPGGFLDLRFIRLYRG-------KPIRII-----RLYYYEIRGGGVYIRAGGT-AIITSCLFTVNPIL---ITEFLYTSSPVTTVRMLGGYLLMEAGTLTVTDSHFYVTRPGVLFREVYTVGGQVL 307 + GL E GC G EL +EN +C ++ L PG Y L++ I V R V V+G P +P ID A RSF V GGFLDLRF++ + KP I R +EIRGG V+I G T +F +P + + S R+ GG++ + G + F+ F V +G VL Sbjct: 147 LNGLPEDGCEVNDGLELTDAIENQSCSIVYLKPGQLYELEREILVR--REVIVMGNPSVLPMIDGEDAIRSFHVLEGGFLDLRFVQQFASDGIVREPKPYEIFATTSPRNRVWEIRGGSVFIDEGALGGKFTGVIFIDDPDVEDAARRSIRRSIDGDVYRIYGGHVFIVGGRVDFVGCLFWDLTLIYTFGNVLYIGQDVL 344
BLAST of NO30G01030 vs. NCBI_GenBank
Match: EWM24054.1 (hypothetical protein Naga_100063g15 [Nannochloropsis gaditana]) HSP 1 Score: 73.6 bits (179), Expect = 4.400e-9 Identity = 64/205 (31.22%), Postives = 94/205 (45.85%), Query Frame = 0 Query: 126 GLVEGCTPKTGEELAFLVENT--TCPVITLLPGATYILKQFIRVMPGRRVSVVGRPLNMPTID-AHRAYRSFTVEPGGFLDLRFIRLYR--GKPIRIIRLYYYEIRGGGVYIRAGGTAIITSCLFTVNPILITEFLYTSSPVTTVRM--------LGGYLLMEAGTLTVTDSHFYVTRP-GVLFREVYTVGGQVLIFAGNAIFTG 317 G C PK G E+ ++ T C VI L TY K ++ +VG PL+MP ++ + + R F + PGG LD RF+ + R GK I R + G V ++AGG T LF + F+ T+R+ LG YL + G L + RP G + +++G +VL+ AGNA+FTG Sbjct: 150 GTAAVCYPKNGYEVVKMINGTESPCRVIVLTKPFTYGYKIQRQINVSMPKVIVGNPLSMPMVNCSKKIERCFEILPGGKLDARFLIMVRGGGKYIAADRSQRLNM-GTHVRVQAGGDFTATGVLFRERNNTMRSFIMEVE--NTLRLQSRYLNFNLGQYLTVIGGNLFLQGCFLLRVRPYGTGYLTTFSLGREVLVIAGNAVFTG 351
BLAST of NO30G01030 vs. NCBI_GenBank
Match: EWM25323.1 (hypothetical protein Naga_100281g10 [Nannochloropsis gaditana]) HSP 1 Score: 71.2 bits (173), Expect = 2.200e-8 Identity = 56/179 (31.28%), Postives = 94/179 (52.51%), Query Frame = 0 Query: 111 PGSAVVGQWTDT------RMGGLVEGCTPKTGEELAFLVEN-TTCPVITLLPGAT--YILKQFIRVMPGRRVSVVGRPLNMPTIDAHR-AYRSFTVEPGGFLDLRFIRLYRGKPIRIIRLYYYEIRGGGVYIRAGGTAIITSCLFTVNPILITEFLYT-SSPVTTVRMLGGYLLMEAGT 279 PG+A + +T + GL + C P+ GEEL + E+ ++C VI L G++ Y L + ++ R++ V+G P+++P I + YR F V+PGG LD+RF+ L+R P R + I G + GG T+C+F F+ + +P R++GG++L+ GT Sbjct: 136 PGAAAINGAFNTLAASAANLAGL-QVCYPQNGEELKGMTESGSSCSVIILKKGSSDKYTLPSTV-IVTSRKI-VLGHPIDLPQIHPDKEVYRLFEVKPGGSLDIRFVSLFRPSP-RKVDENLSVIVAGVALVELGGYMRGTACIFRQPAQTFEAFVKSLETPFARKRIVGGFVLVLGGT 310 The following BLAST results are available for this feature:
BLAST of NO30G01030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 13
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO30G01030 ID=NO30G01030|Name=NO30G01030|organism=Nannochloropsis oceanica|type=gene|length=4354bpback to top protein sequence of NO30G01030.1 >NO30G01030.1-protein ID=NO30G01030.1-protein|Name=NO30G01030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1098bpback to top Synonyms
Publications
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