NO30G00970, NO30G00970 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO30G00970 vs. NCBI_GenBank
Match: CBJ25496.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 112.1 bits (279), Expect = 3.800e-21 Identity = 67/211 (31.75%), Postives = 105/211 (49.76%), Query Frame = 0 Query: 19 PWVKGIAAISITFLAFYLYQGLSYSIERLDVTDADKLKEVYFGNDTWCVLCHTNPA--KPLYRPFLSTARQLAPFGDVKFATVDCTAKLPSGKSTMQRLGLNKNIKPVIFITSEGSKKPRQLFPRYTKTKEALIKELLLIATPTTATVVDAPSLYTGCTSHELCLLVLKGKTFGSKEDKVLTGLMRSYRGSGLKVAMLDSVLYESSLEKSL 228 PW + A+ + +L + L+ I L + +++K+V+ G W VLC A +Y+ F + ++ + G KF VDC LPSGKS +Q+ L++ +KPV+F+T G P Q R +T +L+K + ++ATP + V L + C E C LV+K LM ++R LK +DS E+SLEK L Sbjct: 22 PWYPAVVAMGVAVALAFLAKALAPPIHFLSTYNRNQMKDVFLGKGMWVVLCSGEGAGYDAVYKRFGTASKAMT--GSAKFGVVDCAGSLPSGKSILQKFDLSEEVKPVLFVTGAG-LTPAQASSRNMETHASLLKWVQVMATPGASPVTSTRELESKCLKKERCALVMKAGPLEDDVKDAFKDLMGNHR--NLKFVSIDSTKLETSLEKKL 227
BLAST of NO30G00970 vs. NCBI_GenBank
Match: POM57936.1 (Hypothetical protein PHPALM_37488 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 99.4 bits (246), Expect = 2.500e-17 Identity = 65/221 (29.41%), Postives = 109/221 (49.32%), Query Frame = 0 Query: 23 GIAAISITFLAFYLYQGLSYSIERLDVTDADKLKEVYFGNDTWCVLCHTNPAKPLYRPFLSTARQLAPFGDVKFATVDCTAKLPSGKSTMQRLGLNKNIKPVIFITSEGSKKPRQLFPRYTKTKEALIKELLLIATPTTATVVDAPSLYTGCTSHELCLLVLKGKTFGSKEDKVLTGLMRSYRGSGLKVAMLDSVLYESSLEKSLPKHNLMTTRVLLFKNE 244 G+ +++ A + + RL+VTD+ + V+ + W VLC + P L F + +LA G +DC KLPSGKS ++R G+ +I P +F + G +KP+Q+F Y ++ +AL K + T V ++ L C S C+L ++G+ F E + + LM +R L A +DS + S+E LP R++LF+ + Sbjct: 35 GVIVVALFGSALLQFSTSQAHMFRLEVTDSAMMDRVFRSGEPWVVLC-SRPDDVLPEVFDKVSPRLA--GKSFVGVLDCKQKLPSGKSVLKRYGIKSSITPTVFTVANG-EKPKQVFLNYLQSAQALAKHVTTRTKKTMQQVQNSAQLEARCLSRSNCVLFMRGQRFQPYEKQWIDELMHKHR--TLTFAWIDSTRLKLSVENMLPDARRGEHRMVLFRRQ 249
BLAST of NO30G00970 vs. NCBI_GenBank
Match: OWZ21325.1 (hypothetical protein PHMEG_0004132 [Phytophthora megakarya]) HSP 1 Score: 99.0 bits (245), Expect = 3.300e-17 Identity = 67/221 (30.32%), Postives = 108/221 (48.87%), Query Frame = 0 Query: 23 GIAAISITFLAFYLYQGLSYSIERLDVTDADKLKEVYFGNDTWCVLCHTNPAKPLYRPFLSTARQLAPFGDVKFATVDCTAKLPSGKSTMQRLGLNKNIKPVIFITSEGSKKPRQLFPRYTKTKEALIKELLLIATPTTATVVDAPSLYTGCTSHELCLLVLKGKTFGSKEDKVLTGLMRSYRGSGLKVAMLDSVLYESSLEKSLPKHNLMTTRVLLFKNE 244 G +++ AF + + RL+V+D+ ++ V+ + W VLC + P L F +LA G +DC KLPSGKS ++R G+ +I P +F + G +KP+Q+F Y ++ +AL K + T V ++ L C S C+L L+G+ F E + + LM +R L A DS + SLE LP R++LF+ + Sbjct: 21 GAIVVALFGSAFLQFSTSQTHMFRLEVSDSAMMERVFRSGEPWVVLC-SGPDDVLPEVFDKVTPRLA--GKSFVGVLDCKQKLPSGKSVLKRYGIKSSITPTVFTVANG-EKPKQVFLNYLQSSQALAKHVKARTKKTMQQVQNSAQLEARCLSRATCVLFLRGQRFQPYEKQWIDQLMLKHR--TLTFAWFDSTRLKLSLENLLPVARSGEHRMVLFRRQ 235
BLAST of NO30G00970 vs. NCBI_GenBank
Match: EJK65904.1 (hypothetical protein THAOC_13195 [Thalassiosira oceanica]) HSP 1 Score: 90.9 bits (224), Expect = 9.100e-15 Identity = 71/232 (30.60%), Postives = 114/232 (49.14%), Query Frame = 0 Query: 20 WVKGIAAISITFLAFYLYQGLSYSIERLDVTDADKLKEVYFGNDT----WCVLCHTNPAKPLYRPFLSTARQLAPFGD----VKFATVDCTAKLP-SGKSTMQRLGLNKNIKPVIFITSEGSKKPRQLFPRYTKTKEALIKELLLIATPTTATVVDAPSLYTGCTSHELCLLVLKGKTFGSKEDKVLTGLMRSYRGSGLKVAMLDS-VLYESSLEKSLPKHNLMTTRVLLFK 242 ++K A +++ L +Y QGLS I R+DV DA L+EV+FG + VLCH +S+ Q F D + +DC LP SGKS + LNK +P +F++ + P+Q+ ++ KT L K L + P A + L C + E+C L+LKG + L+ +Y ++ A +DS VL+ ++LE+ LP++ R ++FK Sbjct: 18 FLKPAAGVALAMLIYYFMQGLSKEIPRIDVNDALALREVFFGEGAAQKDYAVLCHPEAKDGSVGIPVSSVFQ-DSFDDGSAPADYVLMDCEHILPESGKSIYDKFKLNKKKRPTVFVSGKVG-PPKQVPEKHLKTGAMLTKLLKQMLEPHAAKIEKTKDLKEKCLNKEVCGLLLKGGKPEPYVKHAVANLLGTY--PSVQFASIDSTVLFLTNLEEYLPEYTAGEHRFVVFK 245
BLAST of NO30G00970 vs. NCBI_GenBank
Match: OQR85163.1 (hypothetical protein ACHHYP_12180 [Achlya hypogyna]) HSP 1 Score: 90.5 bits (223), Expect = 1.200e-14 Identity = 71/232 (30.60%), Postives = 111/232 (47.84%), Query Frame = 0 Query: 21 VKGIAAISITFLAFYLYQGLSYSIER---LDVTDADKLKEVYFGNDTWCVLCHTNPAKPLYRPFLSTARQLAPFGDVKFATVDCTAKLPSGKSTMQRLGLNKNIKPVIFITSEGSKKPRQLFPRYTKTKEALIKELLLIATPTTATVVDAPSLYTGCTSH-ELCLLVLKG-KTFGSKEDKVLTGLMRSYRGSGLKVAMLDSVLYESSLEKSLPKHNLMTTRVLLF-KNEGAN 247 + + +I + A + Q SYS R + + DA ++ V+ + W VLC N + F + +L G V+ +DC +LPSGKS + + ++I P +F + G +KP+QLF Y + +AL + L+ V L C S C+LV +G K F + K L LM S+R +K D+ + + S+E LPK + RVLLF K +G N Sbjct: 35 LSAVGSIIVALFAGFFIQ-FSYSETRMHLIHLDDAALVRRVFKSGEPWVVLC-ANADSVIPEVFDKASERL--LGKVQIGVLDCNDRLPSGKSVYDKFSIRRDITPTVFTVANG-EKPKQLFLNYLQKSKALAAQALVQTAKELHEVQTTGQLQDKCLSKANPCMLVFRGPKKFEPFQKKWLRELMHSHR--HVKFVWADASILKLSVESLLPKASAFDARVLLFQKRKGDN 259
BLAST of NO30G00970 vs. NCBI_GenBank
Match: XP_002288404.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93840.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 87.0 bits (214), Expect = 1.300e-13 Identity = 66/230 (28.70%), Postives = 112/230 (48.70%), Query Frame = 0 Query: 21 VKGIAAISITFLAFYLYQGLSYSIERLDVTDADKLKEVYFGNDT----WCVLCHTNPAK-PLYRPFLSTARQLAPFGD--VKFATVDCTAKLP-SGKSTMQRLGLNKNIKPVIFITSEGSKKPRQLFPRYTKTKEALIKELLLIATPTTATVVDAPSLYTGCTSHELCLLVLKGKTFGSKEDKVLTGLMRSYRGSGLKVAMLD-SVLYESSLEKSLPKHNLMTTRVLLFK 242 +K I++ +A+Y +G+ I R+DVTD+ L+EV+FG + VLCH + P S + + G ++ +DC LP SGKS + LNK +P +F++ + P+Q+ ++ KT L K L + P A + L C + ++C L+LKG + L+ Y ++ A +D SVL+ +LE+ LP++ R ++FK Sbjct: 19 LKPAVGIALAMMAYYFMKGMGNEIPRIDVTDSLALREVFFGEGASGKDYAVLCHPEAKDGSVGIPVSSVFQDSSDDGSAPAEYVLMDCDYVLPDSGKSIYDKFKLNKKKRPTVFVSGKVG-PPKQVPEKHLKTGAMLTKLLKQMLEPHAAKIEKTKELKEKCLNKDVCALLLKGGKPEPYVKHAMANLLGKY--PNVQFASVDSSVLFLVNLEEHLPEYVSGEHRFVVFK 245
BLAST of NO30G00970 vs. NCBI_GenBank
Match: OQS04296.1 (hypothetical protein THRCLA_03461 [Thraustotheca clavata]) HSP 1 Score: 77.8 bits (190), Expect = 7.900e-11 Identity = 62/217 (28.57%), Postives = 101/217 (46.54%), Query Frame = 0 Query: 25 AAISITFLAFYLYQGLSYS---IERLDVTDADKLKEVYFGNDTWCVLCHTNPAKPLYRPFLSTARQLAPFGDVKFATVDCTAKLPSGKSTMQRLGLNKNIKPVIFITSEGSKKPRQLFPRYTKTKEALIKELLLIATPTTATVVDAPSLYTGCTSHEL-CLLVLKG-KTFGSKEDKVLTGLMRSYRGSGLKVAMLDSVLYE---SSLEKSLPKHNLM 234 A I+ F+ F++ SYS + + + D + V+ + W +LC NP L F + +L G V +DC LPSGKS + G+ ++I P IF + G +KP+Q+F Y + +AL + + + L C S C+LV +G K F + + K + LM ++R +K A DS + + SL K H++M Sbjct: 38 AIIAALFVGFFVQ--FSYSETRVHMIQLDDDTHVHRVFKSGEPWVILC-ANPDSVLPEVFDKASERLV--GKVNVGVLDCNDLLPSGKSVYNKFGIRRDISPTIFTVANG-EKPKQIFLNYLQKSKALASQAIAQTAKEFHELQTTTQLQEKCLSKSSPCVLVYRGKKKFETFQKKWIKELMHNHR--LVKFAWADSTILKLSAESLVKGFKDHSVM 246
BLAST of NO30G00970 vs. NCBI_GenBank
Match: GAX12684.1 (hypothetical protein FisN_15Hh160 [Fistulifera solaris]) HSP 1 Score: 77.8 bits (190), Expect = 7.900e-11 Identity = 61/212 (28.77%), Postives = 102/212 (48.11%), Query Frame = 0 Query: 27 ISITFLAFYLYQGLSYSIERLDVTDADKLKEVYFGND----TWCVLCHTNPA-KPLYRPFLSTARQLAPFGDVKFATVDCTAKLP-SGKSTMQRLGLNKNIKPVIFITSEGSKKPRQLFPRYTKTKEALIKELLLIATPTTATVVDAPSLYTGCTSHELCLLVLKGKTFGSKEDKVLTGLMRSYRGSGLKV--AMLD-SVLYESSLEKSLPK 230 I + LA+ +G++ + R++V D +L++V FG ++ VLC + P+ F ++ + F +DC LP SGKS R L+ +++P +F++ +G + P Q+ ++ KT L+K L + P A + L C + +C L+LKG K L M KV A +D SVLY +LE+ LP+ Sbjct: 27 IGLALLAYQFIKGMTADLVRVNVHDELELRDVLFGEGDSGRSYAVLCQDEASTAPISSVFSDAFKEGS--SRAHFRLLDCQYVLPASGKSIADRFKLDTSVRPTVFVSGKGVEAPTQIPAKHLKTGAMLVKALKMKLEPHAAKIETTQDLKVKCLNQPICGLLLKG---SKKAPAYLKDAMSKLLEEFPKVTFASIDSSVLYVKNLEEYLPE 233
BLAST of NO30G00970 vs. NCBI_GenBank
Match: CBN79897.1 (NIMA-like PK similar to Serine/threonine-protein kinase Nek1 [Ectocarpus siliculosus]) HSP 1 Score: 77.4 bits (189), Expect = 1.000e-10 Identity = 50/166 (30.12%), Postives = 76/166 (45.78%), Query Frame = 0 Query: 62 NDTWCVLCHTN--PAKPLYRPFLSTARQLAPFGDVKFATVDCTAKLPSGKSTMQRLGLNKNIKPVIFITSEGSKKPRQLFPRYTKTKEALIKELLLIATPTTATVVDAPSLYTGCTSHELCLLVLKGKTFGSKEDKVLTGLMRSYRGSGLKVAMLDSVLYESSLEK 226 ++ W VLC Y F + +R L VKF VDC LPSGKS +Q+ GL + I + KP Q P ++ +L+K + TP + V SL T C E C+L++ S +D L +M +R ++ +D+ E+S+EK Sbjct: 360 HEPWVVLCKKKGPDYNSAYGRFETASRTLTE--SVKFGVVDCFGSLPSGKSIIQKFGLTNRLNTPILFVAGAEMKPVQASPWNMDSEASLVKWASIAITPAASPVTSTRSLETKCMKKEQCVLIMLAGQLESADDYALKEVMARHR--KVRFVSMDATKLETSIEK 521
BLAST of NO30G00970 vs. NCBI_GenBank
Match: GAX23429.1 (hypothetical protein FisN_15Lh160 [Fistulifera solaris]) HSP 1 Score: 77.4 bits (189), Expect = 1.000e-10 Identity = 62/215 (28.84%), Postives = 100/215 (46.51%), Query Frame = 0 Query: 27 ISITFLAFYLYQGLSYSIERLDVTDADKLKEVYFGND----TWCVLCH----TNPAKPLYRPFLSTARQLAPFGDVKFATVDCTAKLP-SGKSTMQRLGLNKNIKPVIFITSEGSKKPRQLFPRYTKTKEALIKELLLIATPTTATVVDAPSLYTGCTSHELCLLVLKGKTFGSKEDKVLTGLMRSYRGSGLKV--AMLD-SVLYESSLEKSLPK 230 I + LA+ +G++ + R++V D +L++V FG ++ VLC T P ++ A F +DC LP SGKS R L+ +++P +F++ +G + P Q+ ++ KT L+K L + P A + L C + +C L+LKG K L M KV A +D SVLY +LE+ LP+ Sbjct: 27 IGLALLAYQFIKGMTADLVRVNVHDELELRDVLFGEGDSGRSYAVLCQDEASTAPISSVFSDAFKDGSSRA-----HFRLLDCQYVLPASGKSIADRFKLDTSVRPTVFVSGKGVEAPMQIPAKHLKTGAMLVKALKMKLEPHAAKIETTQDLKVKCLNQPICGLLLKG---SKKAPAYLKDAMSKLLEEFPKVTFASIDSSVLYVKNLEEYLPE 233 The following BLAST results are available for this feature:
BLAST of NO30G00970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 19
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO30G00970 ID=NO30G00970|Name=NO30G00970|organism=Nannochloropsis oceanica|type=gene|length=3584bpback to top protein sequence of NO30G00970.1 >NO30G00970.1-protein ID=NO30G00970.1-protein|Name=NO30G00970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=373bpback to top Synonyms
Publications
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