NO30G00910, NO30G00910 (gene) Nannochloropsis oceanica

Overview
NameNO30G00910
Unique NameNO30G00910
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2157
Alignment locationchr30:337274..339430 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr30genomechr30:337274..339430 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO30G00910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR051ncniR051Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR097ngnoR097Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO30G00910.1NO30G00910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO30G00910.1NO30G00910.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO30G00910 ID=NO30G00910|Name=NO30G00910|organism=Nannochloropsis oceanica|type=gene|length=2157bp
CAAAACCCTTAAATAGGCTATTTAAGGATTTTTAGCCCTTAAATAGCGAA
TTCGGCGCTTCCATTTAAGGGCTGCCTACTTAAGAGCAGGGCAGCGCCAT
AAATACTACCGTTAGTATTTAAGGTCTCTTCCTTCCCAGCTGTCAAATAG
CAACATTGCCCTTAAATAGAGAAAACGACCATTTTAGTCGCTTCACCTTC
CTTCATATGCTTGGTACGCCACAGATCACAAGAGAGCAACACATATGAAC
CGATTTGTGGTGATGTGGGTGGGTGTGGACATACCCATAAAAATAAAATG
ACCAAAAAAACACAAAAATCATCATCCCCTTTCTTCACACTGCCCCCGTC
GTTTCCTCGAGGTCTAGCAGCCTTTCATGCATCGTACCATTAAGTGCGCA
GCGCATCAAAGGGACTTCATGGTATATTGCCTTGACTGGTGTTTCACAGC
GTAGGCTATGGGCGCTTGAGTGACTGGTGGGGGAGCGAAATAAACACTCA
TCATTTTCTTCTTTCTTCCCCGTCCTTCCCTCTCATGCACAGACATGTCA
ACACAAGCAAGCGACAATTCCTGTCAACCTGGGAGCAACCTTGTCAACGA
GGGGCAAGAGTTTGACTCAGACTCAGACTCTGACCCTGGCACCAATTCCC
CGGACGCGGACACGAATGGCTCGAGTGACCAGGCAGCACCCCTGGTCCAT
AGGGACCACGGGGCGGGGGTGGGGAAGAAACGCGCCACCAGGAAGCAGAC
TACCAAAGCTTCCCCATTCCAAAAATTCCACTCCAACCCTTACATCTTCG
CCCTGTTTTTATATCTGAgtaagtgatgatgtggctgtgtgagtgacatg
tctgtgcatttgtgtttccgttcttaactcacacaactaccccaccacat
cctcagTGGTGGATGGTCCCATTGACCTCACAGATGAAACCTTCGAGCAT
GGCCGAGTGGATTGGTTTTCACCCTTTGATCTAAACGGCCGGCGCAACAT
CGCCCTCCTCAAGTCCTGTGTCCAAAGACTACAGGCCCTAATCAAAAAAC
ACTACCCTGCTTTTGTGCCTGCCTTCGCTGGGTTCACGGCGGACAAATGT
AAGACCTACACTGACCAAATGTGGGTGAAGAGAAGCGGAGAAGAGGTAAA
AGGTGGGCTTGGTGGGGGGGGGAAGAACCTGAAAAGAGTCCCTCGCTTGG
AGATGGAGATCCCTGAGCCCACGGTGCACGATGGGAGTCGTGTGACGGTG
AATGGCAGCCCTGTCCTCGTCCGCACGCCCTACGAGGTGAGGGTATCTGA
GTTCCTCCACGAAAGTGGGTGATATGTATGGAGCCCACGTATTGAACAAA
CGAACAAATGAAAAGAAGGAAATGCGGTAGTTGTCGTTTTATACCCATGT
GCTTTATTTAGACGTTCACGTGTTAGTACATCGAGTAATTGTCGTCGAGT
ACCTGTCGTGCCGTGTTATAGAACTCATGGGCACGTGACCTACGCCGTGC
TGGGCGCGGGGCAGAAAGATACTCCTCCAGGGTTGGCGGTTCTCCCCCGA
AGTAGTACGCCGTCTGATTGCCCCCATTTAGGCAAGTATGAACATTTGAT
AAAATGACACACACCAAGTACAGCTTGCCTAACGGTGAAACACCGACCTG
CATACGTGGCACGAAACTCAAACGGCGCCAAAGCGAGAATATGCGACCGA
ACGTCCATTCAATGCAAACGCGCGCCCGTGCAAGGTTGCCATTGTGGGTG
AGCTCCTCAGGTGTGAGAGGTCTATTGCGGTCGTGTGATGTGACAATAAA
AGCTCTCATGCGTCGACCACGGTAAGCCGGGTCGCCCAAAACTGTGCATA
CTCTCCCAACACGTTCATTGATGCGGGTCATCGCACTGAAGTCACGGGCG
ATGTCCCACATCGCAGCGTCATTGCGCACACTAGGAAGAGGACCATAACA
CGATTCAACGATTCCCACTGGTGATACCATCCCTTGGAATTTTATCCCAT
GGTATTTGTAGGCCCCTTTGTAGTACCGTTCCTGGTACCTGGTAGGGTAG
CAAACCCTTCTACAGGTGAAGACAGTTAATGTGTGGTTGAGGGTGAGGGG
GGTAGTCCAAAGTGGCTCGTGGAGAAGCAAGACAAGGAATAACAAGGGCG
ACGGGGA
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protein sequence of NO30G00910.1

>NO30G00910.1-protein ID=NO30G00910.1-protein|Name=NO30G00910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=230bp
MSTQASDNSCQPGSNLVNEGQEFDSDSDSDPGTNSPDADTNGSSDQAAPL
VHRDHGAGVGKKRATRKQTTKASPFQKFHSNPYIFALFLYLMVDGPIDLT
DETFEHGRVDWFSPFDLNGRRNIALLKSCVQRLQALIKKHYPAFVPAFAG
FTADKCKTYTDQMWVKRSGEEVKGGLGGGGKNLKRVPRLEMEIPEPTVHD
GSRVTVNGSPVLVRTPYEVRVSEFLHESG*
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Synonyms
Publications