NO30G00900, NO30G00900 (gene) Nannochloropsis oceanica

Overview
NameNO30G00900
Unique NameNO30G00900
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2511
Alignment locationchr30:329754..332264 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr30genomechr30:329754..332264 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO30G00900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR051ncniR051Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR097ngnoR097Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO30G00900.1NO30G00900.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|263951gene_9217Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO30G00900.1NO30G00900.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO30G00900 ID=NO30G00900|Name=NO30G00900|organism=Nannochloropsis oceanica|type=gene|length=2511bp
ACAGACGACTTGGGCCCCCTGAAATAAAGACGATGGAGCAGGCATCGCTG
TCTAAAGCCGTGTTGGATAGCATCTGGGAAGGTTGGTGGTAGCACTCAGC
GAGAGGAAGTTTGAAAGTCAAGCTGAGGATACGCATGAGGTTGCAAGTGG
AAGTGAGAATAACGGAGTGACTGCGAGGAGAATCAATATCGCCGTGCATG
CACTGGTCCTTCTGGTGGAGTGAATGAGACCTCCTTCTTCGATATTTCCA
TTTCCAAGAGTGTACCCCTAAAGATTCGGATAAAAGAGCCATGACGGGTG
ATTGCCTCCGGTGGAGGGTAATTCATCAGCTGGAAGGAAAGGAAATGAGC
TGCAGTAGGAGTAGCAAGTCCATCGAATATGAAACGGTGGATAAATGCTA
CAATGCCTGATCACTCAATATATATATCACTCAAGATATATATGGCGCGT
GCGAAAAATGAGGAAATGTGAAACGACGATGGGAAGCAAAAAAACATGAT
ATGGTTTTGTCACTGGTCGATATTCCTTGTGCATTGCATTGAGCACGGTG
CAATCCCCTGAAATCTGACGCAACATTGAAGACACCCTGCACATACACCG
TATACAGGACTTCCGCACCATGTTCGCCTGGGCCCGCCGCTTGCTAAGGA
AAACTAGCACCTCCCTGGTTTCGTCCTTCCAATCTTTTCCCCTCGCAAAA
CAACAAATCCTCGAGGTCGACGCGGACTTGTTGCGGGAAGTGCTCCTCTT
CCTTGGCACTGACATCGTCGAATGCCATGCCGTCTTGACGGTCAACCACT
TCTGGGGGAAGGTCCTCGCAAGgtaaggaaccttgcgcaagggatgcaaa
ctacgaagttatcagccctcagttttaatgtgaccaagacgccaccaaac
cccaacccttttgtggtgatatctatacactaccatagTGCTGACCCATG
GACGCACCTCCTTCGTCGCGATTACCCCAGCATGGTGAGAGCGGAATCCA
TTCTCCCCTATGGTCAGCCACATCACCTTCTGCGCCGCACCGCAAAGGAT
CTATTGCGCCTCCGGCTCACAAATGCCAACCGCAACAGCAACGAAGATGA
GATGGAAATCCAACGCCTTGAGAAAGAGTTCTGCAACGCACATATGACTT
TTCTTGTCCGTCACCCAGCGCATGGAATCGTCGCTGAGTCCAGGATCCCC
ATTTTGCCTGCTAAAGATGATGAAAACAACTTGTCCGATATCTTCCAAGA
AATGACGATGCACTGTATTTTGCCGCTGTCCGAATACGAGGAATGCGAGA
TGGAATGGAAGATGCCTGGAGGGCTGACGTTGCTTCATTTTGGTGACTTG
GTCGCGGAACCGGATCTGGCGACAGACAAAGCGCAACGCTGGGTGATGTG
GGCGAGCTTTCAAAAAATGCATGGATGTATGAACTTTGGCTTCATCAAGG
ACTATTTTGATTACTTCTCTTATCCCCAGTTCTTAGTTACATGTGAATAT
GCTGCCTATGTTCTCAATAATAAGCGGAAACACAAGGACATCTTAAATAG
AGGCCTTCACACAGTCATGCCGGAATCTGTGAAAGGGTTTTGTACCCTTG
AGGACATTTCCTTTTTCCCCTATCATCCGACGCCACTGGAATGCCTGAAG
ACGTGGGAGAGCTGGACAGCCGTTGCGCTGCAACTTCAAGACGACACCAC
GGAGTTCACCCGCCTGCGGTCGCGGTTTAAGGAGACTTTTCTGGTGGTAG
AAATGGGTGTGGGGTGGGAAATGAAAGTAGCGGGAAAGTGTGGAAAGGAA
CAAAATGAAAATGAGCATGAGAAGCTTCGACAGGAGATGGACACCTTGGC
TTTTGTGCTGGTGCCTCTACTGGACGAACCTGGGCTGATGAATCTTCTCA
ACGCCCAAAGCACGTGCCTCCAGTTCGTGGAAGAAGGGGGAAGGGCCGAA
CGGTTGTTGCCACTCGAAAATCAGTTCGCCAGAATTTTAATTCTGGATTT
GGGGAACGAGCGTGTGTATAACCTAAGTGAATCCTATTTTCCTGTGAGCA
TGTCTGGTGGTGGTGAACCGATGGGACTATACGATTTTACGGCTACACGT
CGCTTCTTCTGCTTCGATCGAGAGATTCAAATCTTTCCCAGCTTCGAAGA
AAAAGCTGTTCCCTCCGAAAAGGGAGAAGACATTAGTTATGTAGTGACGG
TCAAGCTGGATGTTGTAACGCACTGCCGCGACGAGGACGAGGATGAAGAC
GAGGATGAGGATGGAGACGAAGACGAAGATGGCGAGGTGCTAGAGTTTAC
ATCTGTGCTGGAGCTATGGAAATTTTTGGAGCTTTCTTTGATGGCATCAC
AGGTCAATTATGCAAAATCAGCTTAGTTTTCTGTGATTCCTTAGAAGATC
TTCTCGTCTACTGTAGAAATAGAGCGGGAAACATTTGGAGTGTTCTGCAT
CAATCGCATCCCCAAAGGAAAGCAAGAGAAACCAATCGATCATCCAGAAG
CAAGAAAAGAG
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protein sequence of NO30G00900.1

>NO30G00900.1-protein ID=NO30G00900.1-protein|Name=NO30G00900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=547bp
MFAWARRLLRKTSTSLVSSFQSFPLAKQQILEVDADLLREVLLFLGTDIV
ECHAVLTVNHFWGKVLASADPWTHLLRRDYPSMVRAESILPYGQPHHLLR
RTAKDLLRLRLTNANRNSNEDEMEIQRLEKEFCNAHMTFLVRHPAHGIVA
ESRIPILPAKDDENNLSDIFQEMTMHCILPLSEYEECEMEWKMPGGLTLL
HFGDLVAEPDLATDKAQRWVMWASFQKMHGCMNFGFIKDYFDYFSYPQFL
VTCEYAAYVLNNKRKHKDILNRGLHTVMPESVKGFCTLEDISFFPYHPTP
LECLKTWESWTAVALQLQDDTTEFTRLRSRFKETFLVVEMGVGWEMKVAG
KCGKEQNENEHEKLRQEMDTLAFVLVPLLDEPGLMNLLNAQSTCLQFVEE
GGRAERLLPLENQFARILILDLGNERVYNLSESYFPVSMSGGGEPMGLYD
FTATRRFFCFDREIQIFPSFEEKAVPSEKGEDISYVVTVKLDVVTHCRDE
DEDEDEDEDGDEDEDGEVLEFTSVLELWKFLELSLMASQVNYAKSA*
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Synonyms
Publications