NO30G00870, NO30G00870 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO30G00870 vs. NCBI_GenBank
Match: EWM30575.1 (galactosyl transferase gma12 mnn10 family protein [Nannochloropsis gaditana]) HSP 1 Score: 196.4 bits (498), Expect = 2.500e-46 Identity = 105/284 (36.97%), Postives = 153/284 (53.87%), Query Frame = 0 Query: 65 FEYLRPTWKTVYDFLCYCEDFDSSAQEFTDSI-LGPLVSLFNDRKFDISEATDALNEYEALKSKSQRRLPVEPST--CIPWVDLDQP---DRPPRIAMMTIAIFPKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARILLEEGVPVSLADKQEYCHRHGYDFYAISETPRGRPAPWMKIPAALSLLSQQYDWVILVDIDAVIIDHSVKLEEFTDPRYDTIIGVDRHGVNTGVLFLRNTVWSRLFLAEAWTLTDEPLSAIWWEQASIRSVMASTG 343 F++LRP W+T F+ C +FD S + + + + + S+F AT ALN+Y + +++ + P +T C+PW+ D P PPRIA+ T++ A + V +SL DK++YC HGYD + I +T R A W K+P LSLL QYDWV+ +D D VI DHS++LEEF DP +D I+G+D +GVN+GV FLRN+ WS++ L EAWT+T+E +S IWWEQA+I ++ S G Sbjct: 96 FQFLRPQWQTFAGFIDRCAEFDGSEHDPNEKVRVKRIYSIFASPGPSFDAATTALNDYAHVAEENREQPPNRRATFSCLPWIHADAPVLMHGPPRIAIATLS------------------------------------------TADYVNNSAVSLSLIDKKKYCDHHGYDLHIIRKTSTKRAAAWSKLPGILSLL-DQYDWVVSLDADTVIYDHSIRLEEFLDPHHDLIVGLDGNGVNSGVFFLRNSTWSKVLLTEAWTITNEKMSNIWWEQAAIMRLLQSEG 336
BLAST of NO30G00870 vs. NCBI_GenBank
Match: XP_007515074.1 (Subunit of Golgi mannosyltransferase complex (ISS) [Bathycoccus prasinos] >CCO15314.1 Subunit of Golgi mannosyltransferase complex (ISS) [Bathycoccus prasinos]) HSP 1 Score: 94.0 bits (232), Expect = 1.700e-15 Identity = 48/115 (41.74%), Postives = 68/115 (59.13%), Query Frame = 0 Query: 215 SLADKQEYCHRHGYD-FYAISETPRGRPAPWMKIPAALSLLSQQYDWVILVDIDAVIIDHSVKLEEFTDPRYDTIIGVDRHGVNTGVLFLRNTVWSRLFLAEAWTLTDEPLSAIW 329 S+A+KQ Y RHGYD Y RPA W K+ A L +YD+++ +D+D VI++ V+LE+ D YD I+ DR+G+N GV +RNT WS FL E W+ + +A W Sbjct: 237 SVANKQAYADRHGYDMIYDEKIVDSSRPASWSKLLAMRKYL-PKYDFLLYLDVDTVIVNFDVQLEDIVDYEYDQILAADRNGLNCGVWMIRNTEWSLWFLDEMWSQSQLVGAAPW 350
BLAST of NO30G00870 vs. NCBI_GenBank
Match: XP_007510461.1 (predicted protein [Bathycoccus prasinos] >CCO17994.1 predicted protein [Bathycoccus prasinos]) HSP 1 Score: 93.6 bits (231), Expect = 2.300e-15 Identity = 44/108 (40.74%), Postives = 65/108 (60.19%), Query Frame = 0 Query: 215 SLADKQEYCHRHGYDFYAISET-PRGRPAPWMKIPAALSLLSQQYDWVILVDIDAVIIDHSVKLEEFTDPRYDTIIGVDRHGVNTGVLFLRNTVWSRLFLAEAWTLTD 322 S+A+K+ Y H YD ++ET RP W KI A L +Y W++ +DID +I++ ++LE+ D YD +IG D +G+N+GV F++NT W R FL E W D Sbjct: 483 SVANKRAYAKIHEYDLIFVTETLDTTRPMAWSKILAVQRYL-PRYKWLLFLDIDTLIMNPDIRLEDIADDNYDQVIGADHNGINSGVWFVKNTRWMRWFLTELWAQED 589
BLAST of NO30G00870 vs. NCBI_GenBank
Match: XP_003056782.1 (hypothetical protein MICPUCDRAFT_56194 [Micromonas pusilla CCMP1545] >EEH58427.1 hypothetical protein MICPUCDRAFT_56194 [Micromonas pusilla CCMP1545]) HSP 1 Score: 91.3 bits (225), Expect = 1.100e-14 Identity = 42/108 (38.89%), Postives = 64/108 (59.26%), Query Frame = 0 Query: 215 SLADKQEYCHRHGYDFYAISE-TPRGRPAPWMKIPAALSLLSQQYDWVILVDIDAVIIDHSVKLEEFTDPRYDTIIGVDRHGVNTGVLFLRNTVWSRLFLAEAWTLTD 322 S A+K+ Y +HGYD ++E RPA W KI L +Y+WV+ +D+D +I++ +VKLE+ D D +I D +G+N+GV ++N+ W FL E W TD Sbjct: 228 SAANKRRYAAKHGYDLIVVTEVADASRPAAWSKILEVRKHL-PKYEWVLFIDVDTLIMNPNVKLEDIADDSVDQVIAADHNGINSGVWLVKNSRWMMWFLDELWAQTD 334
BLAST of NO30G00870 vs. NCBI_GenBank
Match: XP_002505013.1 (hypothetical protein MICPUN_62693 [Micromonas commoda] >ACO66271.1 hypothetical protein MICPUN_62693 [Micromonas commoda]) HSP 1 Score: 91.3 bits (225), Expect = 1.100e-14 Identity = 47/104 (45.19%), Postives = 60/104 (57.69%), Query Frame = 0 Query: 215 SLADKQEYCHRHGYDFYAISE-TPRGRPAPWMKIPAALSLLSQQYDWVILVDIDAVIIDHSVKLEEFTDPRYDTIIGVDRHGVNTGVLFLRNTVWSRLFLAEAW 318 S+A+KQ Y RHGYD SE RP W K+ A L YD++ VD+D +I + VKLE+ D YD I+ DR+G+N GV +RNT WS FL E W Sbjct: 215 SVANKQAYADRHGYDVIVDSEIIDESRPTSWSKLLAMRKYL-PYYDYLFYVDVDTIIANVDVKLEDIVDYGYDQILAADRNGLNCGVWLIRNTPWSLWFLDEMW 317
BLAST of NO30G00870 vs. NCBI_GenBank
Match: WP_098038876.1 (DUF273 domain-containing protein [Estrella lausannensis] >CRX39019.1 putative secreted protein [Estrella lausannensis]) HSP 1 Score: 87.8 bits (216), Expect = 1.200e-13 Identity = 49/133 (36.84%), Postives = 65/133 (48.87%), Query Frame = 0 Query: 210 EGVPVSLADKQEYCHRHGYDFYAISE---TPRGRPAP--------WMKIPAALSLLSQQYDWVILVDIDAVIIDHSVKLEEFTDPRYDTIIGVDR---HGVNTGVLFLRNTVWSRLFLAEAWTLTDEPLSAIW 329 E V K+ YC +HGYDF SE G PAP WMK+P LS YDWVI D D++ ++ + LE + D YD + G +NTG +F++ WSR FL E WT ++E W Sbjct: 69 ETVKFGTRSKELYCQKHGYDFIIGSEKLYECDGHPAPNKEKLSIHWMKVPMLARFLS-DYDWVIWTDADSIFLNPDITLESYLDDSYDILFGTHHLTCQSLNTGHIFVKCNQWSRDFLNEWWTYSEEYQEGTW 200
BLAST of NO30G00870 vs. NCBI_GenBank
Match: XP_003084369.2 (Galactosyl transferase [Ostreococcus tauri] >CEG01932.1 Galactosyl transferase [Ostreococcus tauri]) HSP 1 Score: 87.4 bits (215), Expect = 1.600e-13 Identity = 43/104 (41.35%), Postives = 62/104 (59.62%), Query Frame = 0 Query: 215 SLADKQEYCHRHGYDFYAISET-PRGRPAPWMKIPAALSLLSQQYDWVILVDIDAVIIDHSVKLEEFTDPRYDTIIGVDRHGVNTGVLFLRNTVWSRLFLAEAW 318 S+A+KQ Y HGYDF ++ R RP W K+ A L +YD+++ VD+DAV+++ LE+ D YD ++ D +GVN GV +RNT W+ FL E W Sbjct: 62 SMANKQAYADAHGYDFIVDADVIDRSRPTSWSKLLAMRKHL-PRYDFLLYVDVDAVVMNPETGLEDIVDFDYDQVLAADSNGVNCGVWLVRNTPWTLWFLDELW 164
BLAST of NO30G00870 vs. NCBI_GenBank
Match: XP_001421311.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO99604.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 85.5 bits (210), Expect = 6.200e-13 Identity = 44/116 (37.93%), Postives = 64/116 (55.17%), Query Frame = 0 Query: 207 LLEEGVPV----SLADKQEYCHRHGYDFYAISE-TPRGRPAPWMKIPAALSLLSQQYDWVILVDIDAVIIDHSVKLEEFTDPRYDTIIGVDRHGVNTGVLFLRNTVWSRLFLAEAW 318 L ++GV S+A+KQ Y HGYD E R RP W K+ A L YD+++ VD+D +I++ KLE+ D YD ++ D++G+N GV +RNT W F+ E W Sbjct: 19 LCDDGVEAICAQSMANKQAYADYHGYDLIVDEEIIDRNRPTSWSKLLAMRKYL-PDYDFMLYVDVDTIIMNPEKKLEDIVDYNYDQMLAADKNGLNCGVWMVRNTPWMLWFIDEMW 133
BLAST of NO30G00870 vs. NCBI_GenBank
Match: XP_003060600.1 (hypothetical protein MICPUCDRAFT_59967 [Micromonas pusilla CCMP1545] >EEH55369.1 hypothetical protein MICPUCDRAFT_59967 [Micromonas pusilla CCMP1545]) HSP 1 Score: 83.6 bits (205), Expect = 2.300e-12 Identity = 43/104 (41.35%), Postives = 57/104 (54.81%), Query Frame = 0 Query: 215 SLADKQEYCHRHGYDFYAISE-TPRGRPAPWMKIPAALSLLSQQYDWVILVDIDAVIIDHSVKLEEFTDPRYDTIIGVDRHGVNTGVLFLRNTVWSRLFLAEAW 318 S+A+KQ Y HGYD + RP W K+ L YD++ VD+D VI + VKLE+ D YD I+ D++G+N GV +RNT WS FL E W Sbjct: 178 SVANKQAYADHHGYDVIVDGDLIDESRPTSWSKLLVMRKYL-PYYDFLFYVDVDTVITNVDVKLEDVVDYGYDQILAADKNGLNCGVWLIRNTPWSLWFLDEMW 280
BLAST of NO30G00870 vs. NCBI_GenBank
Match: GBG34405.1 (Xyloglucan 6-xylosyltransferase 1 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 82.8 bits (203), Expect = 4.000e-12 Identity = 38/107 (35.51%), Postives = 63/107 (58.88%), Query Frame = 0 Query: 215 SLADKQEYCHRHGYD-FYAISETPRGRPAPWMKIPAALSLLSQQYDWVILVDIDAVIIDHSVKLEEFTDPRYDTIIGVDRHGVNTGVLFLRNTVWSRLFLAEAWTLT 321 S+ +KQ+Y +RH Y+ A E + RPA W K P L +YD+++ VD DA+ ++ ++++E+ D +D D +N+GV +RNT W+ +L EAW+ T Sbjct: 175 SIKNKQDYANRHSYEVIVADDEIDKSRPAAWSKFP-ILEKYLPEYDYLMWVDADAIFMNMTIRVEDIVDAEHDLFFARDEGDINSGVFLVRNTDWAMWWLKEAWSQT 280 The following BLAST results are available for this feature:
BLAST of NO30G00870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO30G00870 ID=NO30G00870|Name=NO30G00870|organism=Nannochloropsis oceanica|type=gene|length=2878bpback to top protein sequence of NO30G00870.1 >NO30G00870.1-protein ID=NO30G00870.1-protein|Name=NO30G00870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=603bpback to top Synonyms
Publications
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