NO30G00820, NO30G00820 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO30G00820 vs. NCBI_GenBank
Match: XP_005853604.1 (hypothetical protein NGA_0429500 [Nannochloropsis gaditana CCMP526] >EKU22756.1 hypothetical protein NGA_0429500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 157.5 bits (397), Expect = 3.700e-35 Identity = 81/160 (50.62%), Postives = 106/160 (66.25%), Query Frame = 0
Query: 4 FFRLSPPDPPLEGEYLAELLDAGTGMNNMLATLGFGNPVLPGFWVGKGFLKGENGR-SMGYNLFMEERGRAGRAEGSQLVRKYRMITRADVPSVWDGKPSSELDYRGETHYLGRMEMRDEVREVAPALYLGLGSFGMRDV-RKEQPLPFLLRGPFHAPLP 162
F L PP PL GEYLAE+LDAG+ N+L +GF P PG W+GK F++ + + GYN+F R G++L R+++M T SVWDG+PS +L Y GETH LGR+ MRDEVRE+ P LYLG+G+FG + R+ PLPFLLRGP+ AP+P
Sbjct: 71 FLSLPPPSGPLHGEYLAEILDAGSLAANVLGWIGF-TPFFPGAWIGKSFVEATDEKDGWGYNVF--------RWFGARLDRRFKMHT-CITTSVWDGRPSFQLQYAGETHLLGRLRMRDEVREIQPGLYLGMGTFGYSEAKRRGDPLPFLLRGPYQAPVP 220
BLAST of NO30G00820 vs. NCBI_GenBank
Match: EWM27381.1 (hypothetical protein Naga_100438g3 [Nannochloropsis gaditana]) HSP 1 Score: 157.5 bits (397), Expect = 3.700e-35 Identity = 81/160 (50.62%), Postives = 106/160 (66.25%), Query Frame = 0
Query: 4 FFRLSPPDPPLEGEYLAELLDAGTGMNNMLATLGFGNPVLPGFWVGKGFLKGENGR-SMGYNLFMEERGRAGRAEGSQLVRKYRMITRADVPSVWDGKPSSELDYRGETHYLGRMEMRDEVREVAPALYLGLGSFGMRDV-RKEQPLPFLLRGPFHAPLP 162
F L PP PL GEYLAE+LDAG+ N+L +GF P PG W+GK F++ + + GYN+F R G++L R+++M T SVWDG+PS +L Y GETH LGR+ MRDEVRE+ P LYLG+G+FG + R+ PLPFLLRGP+ AP+P
Sbjct: 83 FLSLPPPSGPLHGEYLAEILDAGSLAANVLGWIGF-TPFFPGAWIGKSFVEATDEKDGWGYNVF--------RWFGARLDRRFKMHT-CITTSVWDGRPSFQLQYAGETHLLGRLRMRDEVREIQPGLYLGMGTFGYSEAKRRGDPLPFLLRGPYQAPVP 232
BLAST of NO30G00820 vs. NCBI_GenBank
Match: WP_058088024.1 (hypothetical protein [Aquabacterium parvum]) HSP 1 Score: 95.5 bits (236), Expect = 1.700e-16 Identity = 54/148 (36.49%), Postives = 78/148 (52.70%), Query Frame = 0
Query: 8 SPPDPPLEGEYLAELLDAGTGMNNMLATLGFGNPVLPGFWVGKGFLKGENGRSMGYNLFMEERGRAGRAEGSQLVRKYRMITRADVPSVWDGKPSSELDYRGETHYLGRMEMRDEVREVAPALYLGLGSFGMRDVRKEQPLPFLLRGP 156
+P ++GE+ A LL + ++ L NP++PG W+ K F GYN F A + V++Y M T PS +DG+P+ L Y G + M DEVR VAP LYLG+G++G D +++ PLPF+LRGP
Sbjct: 38 APTIQEMDGEFAARLLAQPNAVAQVIGNLTVNNPLMPGRWLCKAFKPVSAVGGQGYNSF---------AHLGRTVQRYPMQTLI-APSRYDGRPAYTLVYAAFQSMCGAIHMVDEVRRVAPGLYLGIGTWGFTDGQRQVPLPFVLRGP 175
BLAST of NO30G00820 vs. NCBI_GenBank
Match: PCJ40051.1 (hypothetical protein COA99_09770 [Moraxellaceae bacterium]) HSP 1 Score: 93.6 bits (231), Expect = 6.600e-16 Identity = 55/148 (37.16%), Postives = 78/148 (52.70%), Query Frame = 0
Query: 8 SPPDPPLEGEYLAELLDAGTGMNNMLATLGFGNPVLPGFWVGKGFLKGENGRSMGYNLFMEERGRAGRAEGSQLVRKYRMITRADVPSVWDGKPSSELDYRGETHYLGRMEMRDEVREVAPALYLGLGSFGMRDVRKEQPLPFLLRGP 156
+P ++GEY AELLD G + N++ L PVL G W+ K F G N S GYN F + +++RKY M T + S +D KP +L Y L ++ M DE+R+V +YLG+G+ G ++ PLPF L GP
Sbjct: 41 APTFNEMDGEYNAELLDFGGQIPNIIGKLCTYEPVLNGKWLSKAFTPGSNNISYGYNAF---------NKFGKVIRKYPMRTEMAL-SRFDSKPIFQLTYSAYPTLLAKINMIDEIRKVEEGIYLGIGTVGFTKKQRMTPLPFCLIGP 178
BLAST of NO30G00820 vs. NCBI_GenBank
Match: WP_101894696.1 (hypothetical protein [Ketobacter alkanivorans] >AUM13318.1 hypothetical protein Kalk_13180 [Ketobacter alkanivorans]) HSP 1 Score: 93.6 bits (231), Expect = 6.600e-16 Identity = 56/156 (35.90%), Postives = 82/156 (52.56%), Query Frame = 0
Query: 1 MQTFFRLSPPD-PPLEGEYLAELLDAGTGMNNMLATLGFGNPVLPGFWVGKGFLKGENGRSMGYNLFMEERGRAGRAEGSQLVRKYRMITRADVPSVWDGKPSSELDYRGETHYLGRMEMRDEVREVAPALYLGLGSFGMRDVRKEQPLPFLLRGP 156
++ F RL PP ++GEY A LL + ++ NP+ W+ K F ++ GYN F +G ++V+++ M T+ PS +DGKP+ +L YR G + M DEVR AP LYLGLG++G D ++ P PFLL GP
Sbjct: 19 VELFARLEPPSVTEMQGEYAAHLLAQPNWLAGVVGRATLDNPL--QHWLCKAFRPVDDVSGRGYNTFQ---------QGRRVVQRFPMGTQL-APSRFDGKPAFQLIYRHFHSLCGTVHMVDEVRRAAPGLYLGLGTYGFTDAQRRIPYPFLLTGP 162
BLAST of NO30G00820 vs. NCBI_GenBank
Match: WP_094677685.1 (hypothetical protein [Rhodococcus sp. 06-235-1A] >OZD06557.1 hypothetical protein CH275_10090 [Rhodococcus sp. 06-235-1A]) HSP 1 Score: 87.0 bits (214), Expect = 6.100e-14 Identity = 51/148 (34.46%), Postives = 73/148 (49.32%), Query Frame = 0
Query: 8 SPPDPPLEGEYLAELLDAGTGMNNMLATLGFGNPVLPGFWVGKGFLKGENGRSMGYNLFMEERGRAGRAEGSQLVRKYRMITRADVPSVWDGKPSSELDYRGETHYLGRMEMRDEVREVAPALYLGLGSFGMRDVRKEQPLPFLLRGP 156
SP + GEY A LL + L + GNP+ P W K F + GYN F +Q+V++ M+T+ PS +D KP+ L YR GR+ M DE+R + YLG+G+ G+ D ++ P PFLL+GP
Sbjct: 27 SPTIEEMNGEYPATLLAQPNVFASALGAVSVGNPLAP--WQAKAFRPVDRATGRGYNTF---------RRSNQIVQRNPMLTQM-APSRYDQKPAYTLIYRAFNSICGRINMVDEIRRIREGFYLGIGTCGITDRQRHLPRPFLLQGP 162
BLAST of NO30G00820 vs. NCBI_GenBank
Match: WP_056809271.1 (hypothetical protein [Nocardia sp. Root136] >KQY37249.1 hypothetical protein ASD42_01135 [Nocardia sp. Root136]) HSP 1 Score: 84.3 bits (207), Expect = 4.000e-13 Identity = 52/148 (35.14%), Postives = 72/148 (48.65%), Query Frame = 0
Query: 8 SPPDPPLEGEYLAELLDAGTGMNNMLATLGFGNPVLPGFWVGKGFLKGENGRSMGYNLFMEERGRAGRAEGSQLVRKYRMITRADVPSVWDGKPSSELDYRGETHYLGRMEMRDEVREVAPALYLGLGSFGMRDVRKEQPLPFLLRGP 156
+P ++GEY A LL + + NP+ P W+ K F + GYN F AE Q+ ++Y M T PS +DG P+ L YR G + M DEVR AP +YLG+G++G D ++ P PFLL GP
Sbjct: 32 APTIAEIDGEYTAALLAQPNLFAVVTGKVAVANPLGP--WLCKAFRPVDENGGRGYNTF---------AEFGQVRQRYPMRTLL-APSRYDGAPAYTLIYRAYASMCGSINMVDEVRRAAPGVYLGMGTWGFTDAQRRVPRPFLLTGP 167
BLAST of NO30G00820 vs. NCBI_GenBank
Match: WP_063002839.1 (hypothetical protein [Nocardia cummidelens]) HSP 1 Score: 84.3 bits (207), Expect = 4.000e-13 Identity = 52/148 (35.14%), Postives = 72/148 (48.65%), Query Frame = 0
Query: 8 SPPDPPLEGEYLAELLDAGTGMNNMLATLGFGNPVLPGFWVGKGFLKGENGRSMGYNLFMEERGRAGRAEGSQLVRKYRMITRADVPSVWDGKPSSELDYRGETHYLGRMEMRDEVREVAPALYLGLGSFGMRDVRKEQPLPFLLRGP 156
+P ++GEY A LL + + NP+ P W+ K F + GYN F AE Q+ ++Y M T PS +DG P+ L YR G + M DEVR AP +YLG+G++G D ++ P PFLL GP
Sbjct: 32 APTIAEIDGEYTAALLAQPNLFAVVTGKVAVANPLGP--WLCKAFRPVDENGGRGYNTF---------AEFGQVRQRYPMRTLL-APSRYDGAPAYTLIYRAYASLCGSINMVDEVRRAAPGVYLGMGTWGFTDAQRRVPRPFLLTGP 167
BLAST of NO30G00820 vs. NCBI_GenBank
Match: WP_063055754.1 (hypothetical protein [Nocardia soli]) HSP 1 Score: 84.3 bits (207), Expect = 4.000e-13 Identity = 52/148 (35.14%), Postives = 72/148 (48.65%), Query Frame = 0
Query: 8 SPPDPPLEGEYLAELLDAGTGMNNMLATLGFGNPVLPGFWVGKGFLKGENGRSMGYNLFMEERGRAGRAEGSQLVRKYRMITRADVPSVWDGKPSSELDYRGETHYLGRMEMRDEVREVAPALYLGLGSFGMRDVRKEQPLPFLLRGP 156
+P ++GEY A LL + + NP+ P W+ K F + GYN F AE Q+ ++Y M T PS +DG P+ L YR G + M DEVR AP +YLG+G++G D ++ P PFLL GP
Sbjct: 32 APTIAEIDGEYTAALLAQPNLFAVVTGKVAVANPLGP--WLCKAFRPVDENGGRGYNTF---------AEFGQVRQRYPMRTLL-APSRYDGAPAYTLIYRAYASLCGSINMVDEVRRAAPGVYLGMGTWGFTDAQRRVPRPFLLSGP 167
BLAST of NO30G00820 vs. NCBI_GenBank
Match: WP_061396643.1 (hypothetical protein [Acinetobacter haemolyticus] >KXO82767.1 hypothetical protein AYL20_01890 [Acinetobacter haemolyticus]) HSP 1 Score: 84.0 bits (206), Expect = 5.200e-13 Identity = 51/152 (33.55%), Postives = 78/152 (51.32%), Query Frame = 0
Query: 8 SPPDPPLEGEYLAELLDAGTGMNNMLATLGFGNPVLPGFWVGKGFLKGENGRSMGYNLFMEERGRAGRAEGSQLVRKYRMITRADVPSVWDGKPSSELDYRGETHYLGRMEMRDEVREVAPALYLGLGSFGMRDVRKEQPLPFLLRGPFHAP 160
SP ++GEY A LL + + + + NP W+ K F + GYN F++E ++V+ Y M+T PS +D +P+ +L YR G + M DE+R V+P LYLG+G++G ++ P PFLL+GP H P
Sbjct: 27 SPSIEEMDGEYAAYLLAQPNWLADKIGHITLDNPFRR--WLSKAFRPVDTTTGRGYNTFLKEH---------RVVQCYPMMTMI-APSRFDNQPAYQLVYRQFHSICGSINMVDEIRRVSPNLYLGIGTYGFTHHQRHIPYPFLLKGP-HTP 165 The following BLAST results are available for this feature:
BLAST of NO30G00820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO30G00820 ID=NO30G00820|Name=NO30G00820|organism=Nannochloropsis oceanica|type=gene|length=855bpback to top protein sequence of NO30G00820.1 >NO30G00820.1-protein ID=NO30G00820.1-protein|Name=NO30G00820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=175bpback to top Synonyms
Publications
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