NO30G00820, NO30G00820 (gene) Nannochloropsis oceanica

Overview
NameNO30G00820
Unique NameNO30G00820
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length855
Alignment locationchr30:300173..301027 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr30genomechr30:300173..301027 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO30G00820 vs. NCBI_GenBank
Match: XP_005853604.1 (hypothetical protein NGA_0429500 [Nannochloropsis gaditana CCMP526] >EKU22756.1 hypothetical protein NGA_0429500 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 157.5 bits (397), Expect = 3.700e-35
Identity = 81/160 (50.62%), Postives = 106/160 (66.25%), Query Frame = 0
Query:    4 FFRLSPPDPPLEGEYLAELLDAGTGMNNMLATLGFGNPVLPGFWVGKGFLKGENGR-SMGYNLFMEERGRAGRAEGSQLVRKYRMITRADVPSVWDGKPSSELDYRGETHYLGRMEMRDEVREVAPALYLGLGSFGMRDV-RKEQPLPFLLRGPFHAPLP 162
            F  L PP  PL GEYLAE+LDAG+   N+L  +GF  P  PG W+GK F++  + +   GYN+F        R  G++L R+++M T     SVWDG+PS +L Y GETH LGR+ MRDEVRE+ P LYLG+G+FG  +  R+  PLPFLLRGP+ AP+P
Sbjct:   71 FLSLPPPSGPLHGEYLAEILDAGSLAANVLGWIGF-TPFFPGAWIGKSFVEATDEKDGWGYNVF--------RWFGARLDRRFKMHT-CITTSVWDGRPSFQLQYAGETHLLGRLRMRDEVREIQPGLYLGMGTFGYSEAKRRGDPLPFLLRGPYQAPVP 220          
BLAST of NO30G00820 vs. NCBI_GenBank
Match: EWM27381.1 (hypothetical protein Naga_100438g3 [Nannochloropsis gaditana])

HSP 1 Score: 157.5 bits (397), Expect = 3.700e-35
Identity = 81/160 (50.62%), Postives = 106/160 (66.25%), Query Frame = 0
Query:    4 FFRLSPPDPPLEGEYLAELLDAGTGMNNMLATLGFGNPVLPGFWVGKGFLKGENGR-SMGYNLFMEERGRAGRAEGSQLVRKYRMITRADVPSVWDGKPSSELDYRGETHYLGRMEMRDEVREVAPALYLGLGSFGMRDV-RKEQPLPFLLRGPFHAPLP 162
            F  L PP  PL GEYLAE+LDAG+   N+L  +GF  P  PG W+GK F++  + +   GYN+F        R  G++L R+++M T     SVWDG+PS +L Y GETH LGR+ MRDEVRE+ P LYLG+G+FG  +  R+  PLPFLLRGP+ AP+P
Sbjct:   83 FLSLPPPSGPLHGEYLAEILDAGSLAANVLGWIGF-TPFFPGAWIGKSFVEATDEKDGWGYNVF--------RWFGARLDRRFKMHT-CITTSVWDGRPSFQLQYAGETHLLGRLRMRDEVREIQPGLYLGMGTFGYSEAKRRGDPLPFLLRGPYQAPVP 232          
BLAST of NO30G00820 vs. NCBI_GenBank
Match: WP_058088024.1 (hypothetical protein [Aquabacterium parvum])

HSP 1 Score: 95.5 bits (236), Expect = 1.700e-16
Identity = 54/148 (36.49%), Postives = 78/148 (52.70%), Query Frame = 0
Query:    8 SPPDPPLEGEYLAELLDAGTGMNNMLATLGFGNPVLPGFWVGKGFLKGENGRSMGYNLFMEERGRAGRAEGSQLVRKYRMITRADVPSVWDGKPSSELDYRGETHYLGRMEMRDEVREVAPALYLGLGSFGMRDVRKEQPLPFLLRGP 156
            +P    ++GE+ A LL     +  ++  L   NP++PG W+ K F         GYN F         A   + V++Y M T    PS +DG+P+  L Y       G + M DEVR VAP LYLG+G++G  D +++ PLPF+LRGP
Sbjct:   38 APTIQEMDGEFAARLLAQPNAVAQVIGNLTVNNPLMPGRWLCKAFKPVSAVGGQGYNSF---------AHLGRTVQRYPMQTLI-APSRYDGRPAYTLVYAAFQSMCGAIHMVDEVRRVAPGLYLGIGTWGFTDGQRQVPLPFVLRGP 175          
BLAST of NO30G00820 vs. NCBI_GenBank
Match: PCJ40051.1 (hypothetical protein COA99_09770 [Moraxellaceae bacterium])

HSP 1 Score: 93.6 bits (231), Expect = 6.600e-16
Identity = 55/148 (37.16%), Postives = 78/148 (52.70%), Query Frame = 0
Query:    8 SPPDPPLEGEYLAELLDAGTGMNNMLATLGFGNPVLPGFWVGKGFLKGENGRSMGYNLFMEERGRAGRAEGSQLVRKYRMITRADVPSVWDGKPSSELDYRGETHYLGRMEMRDEVREVAPALYLGLGSFGMRDVRKEQPLPFLLRGP 156
            +P    ++GEY AELLD G  + N++  L    PVL G W+ K F  G N  S GYN F          +  +++RKY M T   + S +D KP  +L Y      L ++ M DE+R+V   +YLG+G+ G    ++  PLPF L GP
Sbjct:   41 APTFNEMDGEYNAELLDFGGQIPNIIGKLCTYEPVLNGKWLSKAFTPGSNNISYGYNAF---------NKFGKVIRKYPMRTEMAL-SRFDSKPIFQLTYSAYPTLLAKINMIDEIRKVEEGIYLGIGTVGFTKKQRMTPLPFCLIGP 178          
BLAST of NO30G00820 vs. NCBI_GenBank
Match: WP_101894696.1 (hypothetical protein [Ketobacter alkanivorans] >AUM13318.1 hypothetical protein Kalk_13180 [Ketobacter alkanivorans])

HSP 1 Score: 93.6 bits (231), Expect = 6.600e-16
Identity = 56/156 (35.90%), Postives = 82/156 (52.56%), Query Frame = 0
Query:    1 MQTFFRLSPPD-PPLEGEYLAELLDAGTGMNNMLATLGFGNPVLPGFWVGKGFLKGENGRSMGYNLFMEERGRAGRAEGSQLVRKYRMITRADVPSVWDGKPSSELDYRGETHYLGRMEMRDEVREVAPALYLGLGSFGMRDVRKEQPLPFLLRGP 156
            ++ F RL PP    ++GEY A LL     +  ++      NP+    W+ K F   ++    GYN F          +G ++V+++ M T+   PS +DGKP+ +L YR      G + M DEVR  AP LYLGLG++G  D ++  P PFLL GP
Sbjct:   19 VELFARLEPPSVTEMQGEYAAHLLAQPNWLAGVVGRATLDNPL--QHWLCKAFRPVDDVSGRGYNTFQ---------QGRRVVQRFPMGTQL-APSRFDGKPAFQLIYRHFHSLCGTVHMVDEVRRAAPGLYLGLGTYGFTDAQRRIPYPFLLTGP 162          
BLAST of NO30G00820 vs. NCBI_GenBank
Match: WP_094677685.1 (hypothetical protein [Rhodococcus sp. 06-235-1A] >OZD06557.1 hypothetical protein CH275_10090 [Rhodococcus sp. 06-235-1A])

HSP 1 Score: 87.0 bits (214), Expect = 6.100e-14
Identity = 51/148 (34.46%), Postives = 73/148 (49.32%), Query Frame = 0
Query:    8 SPPDPPLEGEYLAELLDAGTGMNNMLATLGFGNPVLPGFWVGKGFLKGENGRSMGYNLFMEERGRAGRAEGSQLVRKYRMITRADVPSVWDGKPSSELDYRGETHYLGRMEMRDEVREVAPALYLGLGSFGMRDVRKEQPLPFLLRGP 156
            SP    + GEY A LL       + L  +  GNP+ P  W  K F   +     GYN F            +Q+V++  M+T+   PS +D KP+  L YR      GR+ M DE+R +    YLG+G+ G+ D ++  P PFLL+GP
Sbjct:   27 SPTIEEMNGEYPATLLAQPNVFASALGAVSVGNPLAP--WQAKAFRPVDRATGRGYNTF---------RRSNQIVQRNPMLTQM-APSRYDQKPAYTLIYRAFNSICGRINMVDEIRRIREGFYLGIGTCGITDRQRHLPRPFLLQGP 162          
BLAST of NO30G00820 vs. NCBI_GenBank
Match: WP_056809271.1 (hypothetical protein [Nocardia sp. Root136] >KQY37249.1 hypothetical protein ASD42_01135 [Nocardia sp. Root136])

HSP 1 Score: 84.3 bits (207), Expect = 4.000e-13
Identity = 52/148 (35.14%), Postives = 72/148 (48.65%), Query Frame = 0
Query:    8 SPPDPPLEGEYLAELLDAGTGMNNMLATLGFGNPVLPGFWVGKGFLKGENGRSMGYNLFMEERGRAGRAEGSQLVRKYRMITRADVPSVWDGKPSSELDYRGETHYLGRMEMRDEVREVAPALYLGLGSFGMRDVRKEQPLPFLLRGP 156
            +P    ++GEY A LL        +   +   NP+ P  W+ K F   +     GYN F         AE  Q+ ++Y M T    PS +DG P+  L YR      G + M DEVR  AP +YLG+G++G  D ++  P PFLL GP
Sbjct:   32 APTIAEIDGEYTAALLAQPNLFAVVTGKVAVANPLGP--WLCKAFRPVDENGGRGYNTF---------AEFGQVRQRYPMRTLL-APSRYDGAPAYTLIYRAYASMCGSINMVDEVRRAAPGVYLGMGTWGFTDAQRRVPRPFLLTGP 167          
BLAST of NO30G00820 vs. NCBI_GenBank
Match: WP_063002839.1 (hypothetical protein [Nocardia cummidelens])

HSP 1 Score: 84.3 bits (207), Expect = 4.000e-13
Identity = 52/148 (35.14%), Postives = 72/148 (48.65%), Query Frame = 0
Query:    8 SPPDPPLEGEYLAELLDAGTGMNNMLATLGFGNPVLPGFWVGKGFLKGENGRSMGYNLFMEERGRAGRAEGSQLVRKYRMITRADVPSVWDGKPSSELDYRGETHYLGRMEMRDEVREVAPALYLGLGSFGMRDVRKEQPLPFLLRGP 156
            +P    ++GEY A LL        +   +   NP+ P  W+ K F   +     GYN F         AE  Q+ ++Y M T    PS +DG P+  L YR      G + M DEVR  AP +YLG+G++G  D ++  P PFLL GP
Sbjct:   32 APTIAEIDGEYTAALLAQPNLFAVVTGKVAVANPLGP--WLCKAFRPVDENGGRGYNTF---------AEFGQVRQRYPMRTLL-APSRYDGAPAYTLIYRAYASLCGSINMVDEVRRAAPGVYLGMGTWGFTDAQRRVPRPFLLTGP 167          
BLAST of NO30G00820 vs. NCBI_GenBank
Match: WP_063055754.1 (hypothetical protein [Nocardia soli])

HSP 1 Score: 84.3 bits (207), Expect = 4.000e-13
Identity = 52/148 (35.14%), Postives = 72/148 (48.65%), Query Frame = 0
Query:    8 SPPDPPLEGEYLAELLDAGTGMNNMLATLGFGNPVLPGFWVGKGFLKGENGRSMGYNLFMEERGRAGRAEGSQLVRKYRMITRADVPSVWDGKPSSELDYRGETHYLGRMEMRDEVREVAPALYLGLGSFGMRDVRKEQPLPFLLRGP 156
            +P    ++GEY A LL        +   +   NP+ P  W+ K F   +     GYN F         AE  Q+ ++Y M T    PS +DG P+  L YR      G + M DEVR  AP +YLG+G++G  D ++  P PFLL GP
Sbjct:   32 APTIAEIDGEYTAALLAQPNLFAVVTGKVAVANPLGP--WLCKAFRPVDENGGRGYNTF---------AEFGQVRQRYPMRTLL-APSRYDGAPAYTLIYRAYASLCGSINMVDEVRRAAPGVYLGMGTWGFTDAQRRVPRPFLLSGP 167          
BLAST of NO30G00820 vs. NCBI_GenBank
Match: WP_061396643.1 (hypothetical protein [Acinetobacter haemolyticus] >KXO82767.1 hypothetical protein AYL20_01890 [Acinetobacter haemolyticus])

HSP 1 Score: 84.0 bits (206), Expect = 5.200e-13
Identity = 51/152 (33.55%), Postives = 78/152 (51.32%), Query Frame = 0
Query:    8 SPPDPPLEGEYLAELLDAGTGMNNMLATLGFGNPVLPGFWVGKGFLKGENGRSMGYNLFMEERGRAGRAEGSQLVRKYRMITRADVPSVWDGKPSSELDYRGETHYLGRMEMRDEVREVAPALYLGLGSFGMRDVRKEQPLPFLLRGPFHAP 160
            SP    ++GEY A LL     + + +  +   NP     W+ K F   +     GYN F++E          ++V+ Y M+T    PS +D +P+ +L YR      G + M DE+R V+P LYLG+G++G    ++  P PFLL+GP H P
Sbjct:   27 SPSIEEMDGEYAAYLLAQPNWLADKIGHITLDNPFRR--WLSKAFRPVDTTTGRGYNTFLKEH---------RVVQCYPMMTMI-APSRFDNQPAYQLVYRQFHSICGSINMVDEIRRVSPNLYLGIGTYGFTHHQRHIPYPFLLKGP-HTP 165          
The following BLAST results are available for this feature:
BLAST of NO30G00820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005853604.13.700e-3550.63hypothetical protein NGA_0429500 [Nannochloropsis ... [more]
EWM27381.13.700e-3550.63hypothetical protein Naga_100438g3 [Nannochloropsi... [more]
WP_058088024.11.700e-1636.49hypothetical protein [Aquabacterium parvum][more]
PCJ40051.16.600e-1637.16hypothetical protein COA99_09770 [Moraxellaceae ba... [more]
WP_101894696.16.600e-1635.90hypothetical protein [Ketobacter alkanivorans] >AU... [more]
WP_094677685.16.100e-1434.46hypothetical protein [Rhodococcus sp. 06-235-1A] >... [more]
WP_056809271.14.000e-1335.14hypothetical protein [Nocardia sp. Root136] >KQY37... [more]
WP_063002839.14.000e-1335.14hypothetical protein [Nocardia cummidelens][more]
WP_063055754.14.000e-1335.14hypothetical protein [Nocardia soli][more]
WP_061396643.15.200e-1333.55hypothetical protein [Acinetobacter haemolyticus] ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR051ncniR051Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO30G00820.1NO30G00820.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|605745gene_9230Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO30G00820.1NO30G00820.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO30G00820 ID=NO30G00820|Name=NO30G00820|organism=Nannochloropsis oceanica|type=gene|length=855bp
ATGCAGACTTTTTTTCGTTTATCTCCCCCCGATCCTCCATTGGAAGGGGA
GTACTTGGCTGAGCTCTTGGACGCGGGAACAGGGATGAATAACATGCTGG
CCACGTTGGGCTTTGGCAACCCGGTGCTCCCTGgcaagtaaaggagtgag
ctagtttgcctcttgaggggctttcttcccttttacgtcagatttcttac
tattatatccacaaatgggaaatactgatttcgtccttacatccattctc
ccgcttcactccttcctccctattttccatctttgtcctccccaaaagGT
TTCTGGGTCGGCAAGGGTTTTCTGAAAGGTGAAAACGGCCGCAGCATGGG
CTACAACCTCTTCATGGAGGAGAGAGGGAGGGCGGGCAGGGCGGAAGGAA
GTCAGTTGGTGCGCAAGTACCGCATGATAACACGGGCGGACGTTCCTTCT
GTATGGGACGGAAAACCGAGCTCAGAATTGGATTATCGGGGCGAGACGCA
TTACTTGGGGAGGATGGAAATGAGGGATGAAGTGCGAGAGGTGGCGCCTG
CATTGTACCTAGGTTTGGGGAGCTTTGGTATGCGAGACGTGAGgtaggaa
aggagggagagaaggaggggaggggaggagggtaggggcgggagggtcag
ttctcatggagaattgtgcttcggcatgcctctctcctaacacgtttctc
atctcattttccgctccctgtttatcatttttttgggattgaaaaatccc
acgaacagGAAGGAGCAGCCGTTACCCTTTCTGTTGCGCGGTCCCTTTCA
CGCACCTTTGCCCCTGGGAGAAGTAATGATGCTGGATCGTGAGGCAGGAG
ACTAG
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protein sequence of NO30G00820.1

>NO30G00820.1-protein ID=NO30G00820.1-protein|Name=NO30G00820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=175bp
MQTFFRLSPPDPPLEGEYLAELLDAGTGMNNMLATLGFGNPVLPGFWVGK
GFLKGENGRSMGYNLFMEERGRAGRAEGSQLVRKYRMITRADVPSVWDGK
PSSELDYRGETHYLGRMEMRDEVREVAPALYLGLGSFGMRDVRKEQPLPF
LLRGPFHAPLPLGEVMMLDREAGD*
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Synonyms
Publications