NO30G00760, NO30G00760 (gene) Nannochloropsis oceanica

Overview
NameNO30G00760
Unique NameNO30G00760
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1256
Alignment locationchr30:279484..280739 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr30genomechr30:279484..280739 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO30G00760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR051ncniR051Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR102ngnoR102Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO30G00760.1NO30G00760.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO30G00760.1NO30G00760.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO30G00760 ID=NO30G00760|Name=NO30G00760|organism=Nannochloropsis oceanica|type=gene|length=1256bp
ATGAATCAGGCGAGTAAGAAGGAGAAGGGGATTGCGGACATTAACCTGGT
GGCTCCTAACGCCGGAGCGTACCTATTGTGGACCCGGGGGATCGAGATGG
TAGTGAGACACTTCCAGGCCGGGGACGAAGAGGGGGAGGAAGATGACGGA
GAAGGAGCAGGGGGGCTGGGTGGGCAGAAGGAGGGAGGGGGGAAGGGAGG
GCAGGAGGGAGGGTGTGTGGATGGGGCGGGGGTGTATGATGGACGGGGAG
ATTATTTGGCGTTTCGGAGCGGGAAGGAGGGGGAAGGAAGGGAGAAAGGA
AGGGAGGGGGGTAATGCCCAGCAGCAGCAGCAGCAGCAGCAGCAGAAGAA
GAAGAAGAAGGAGGAGGAGGAGCATGAGCATAAGGCAATAGCTCTCACTC
CAgtcttgcctcgtccaccccctgcttcccatccttccttggtgtctttt
ggcccctcatcctccccccctcctccctcttatcctcatcctccctctcc
tcctcgcactcccacccttttcccttgacatccctcttggtatcgcatca
gCATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGTACGACAAACATCTCTCTCATCATCATCATCAG
CAGCAGCAGCAGCACGGCGATGGCAGGGTGGTACGGTCTGATGAAAAAGA
GGGAGGGAGGGAGAGAAGGAGGGAGGATGAGGAGGAGGGAGGGGCTGTGA
CCCTCCAGACTGTGGATACCATGAAACGTTCGTTGGGGATGGATCCGGAC
GAAAGAGCGATCAAGGACGCGGGGGAGGAGATGGTGGAGAGGGGGGAGAG
AAAAGATGGATGGGAGAAGGAGAAGGAGGGAAGGAATGAGACAGCAGGAT
TGCCAGGAACACCAGGAGCAACAGTAGGAGGAGATGCACCTGTCTCCGCT
TCAGACGTTCTGTCTCATTCATTCTCTTCTGATGTCCTGAGTGTAACGAA
GAAAATAGGAGAGGGAGAGGAGGAAAGGAAGGAGAAGTCGAAACCGTTGC
TGCCCCCGGTGAAAGAGATGGAAGAAAACCGTCCCTTGAATGGGGGGGTA
GAGGGGAGGCAGGGACAATGCGAAGAAAGAGAAGGAGGAAGAGGAGGAGG
AGGAGGGGGCGGGGACGAAGGAGGGGAGGGTTGCGAGGGGGTTCTGGATG
ATGTGTATACGGACGCGTCGTCCTACCTCCAGTTTTTGCATGAGGACAAG
AATTAG
back to top

protein sequence of NO30G00760.1

>NO30G00760.1-protein ID=NO30G00760.1-protein|Name=NO30G00760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=369bp
MNQASKKEKGIADINLVAPNAGAYLLWTRGIEMVVRHFQAGDEEGEEDDG
EGAGGLGGQKEGGGKGGQEGGCVDGAGVYDGRGDYLAFRSGKEGEGREKG
REGGNAQQQQQQQQQKKKKKEEEEHEHKAIALTPHQQQQQQQQQQQQQQQ
QQQQQQYDKHLSHHHHQQQQQHGDGRVVRSDEKEGGRERRREDEEEGGAV
TLQTVDTMKRSLGMDPDERAIKDAGEEMVERGERKDGWEKEKEGRNETAG
LPGTPGATVGGDAPVSASDVLSHSFSSDVLSVTKKIGEGEEERKEKSKPL
LPPVKEMEENRPLNGGVEGRQGQCEEREGGRGGGGGGGDEGGEGCEGVLD
DVYTDASSYLQFLHEDKN*
back to top
Synonyms
Publications