NO30G00700, NO30G00700 (gene) Nannochloropsis oceanica

Overview
NameNO30G00700
Unique NameNO30G00700
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2823
Alignment locationchr30:256271..259093 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr30genomechr30:256271..259093 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO30G00700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR051ncniR051Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR102ngnoR102Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO30G00700.1NO30G00700.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|633367gene_9245Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO30G00700.1NO30G00700.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO30G00700 ID=NO30G00700|Name=NO30G00700|organism=Nannochloropsis oceanica|type=gene|length=2823bp
CTGGATAGCTGAATTCTGTAGGCATACCAAAACCAAGCACTTTAATTCAT
GCCAATTCTTTTTATTTCATTCTGTAACTCGCCTCATTTTGTGCTCGATT
TACTTTCGTAAGTATTCGAAATGCCTACGGATGTCCTTCATGAGCCCATG
GGGTCTCATCAAATGAGAAACTTGACTTCATGCTGCATTGCGTGGTAAGG
CCTTTAGGGGGTTAGGTGTCAGCTCTTTTGTTCAAATATCTCGATGCCAA
CCAAAAATTGCCACTGATACTCGTGTCACCATCTATTTATACATAGTGGA
TCTTAATTGTGCCCTGGCACCATCCCACCATGGCGTCTTCATGGTCAAAA
TCACCACCCCTCCAACAGACCCCCCCAACCCCCAACCACCAGCGAGGAAA
AAGGACCAAATGGCGCTGATATGGGCTACAGCTACGCGCATTATGAATTC
ACAGTGGACAAGTGACCTCATCTGCAAGACATGCAAACCTGAATCTCGTG
TGTTGTGGCAGCAGATATAGATCCATCGCCGGAGATGCAGCAGCAATTGG
ACAAGGGCAACCTCGGAGCACGCATCAATGACAACTACATTCATGGACTC
TTTGTAAGGGCTGCCCAAATTAGGAGAAAAGGGGGCTTACATCATTACCT
GAAGCCGGTGAAAAAGTCAGACCACCACCGACAGCAGCAGCAGCTGCTGC
AACAGCAGCGTGGCGGTGGAGGGGGCGATGATGGTGAGAGGGAGGAGGAG
GAGAAGGAAGAGGAGCAACAACAACAGCAGCAGCAGCCATCACCTGCAGC
AACTATGCAGAGGCATTTGGCGAAGCTACCCCTTGCATAGGGTATAGACC
CCGACAGCTTGGGGGCTCCAAAACCTATCTCCTAGACGTTCCACTCTCTT
ATTTCTACCCCAAAACCTCCAAAATTGTTCAAAATGGAGGTATTAGGATA
TAAATAACTGAGAGGAAAGTCTAGAAAAAAGGTTTGAGATCTCCGCGCAC
GGAGTTTCCGCCCAAAAAGGCATGGATCTTCGAAAGGTTGACATGCGGTA
GTGGGCAGAAAGGAGAAGACCAGCGAGGTTTCCTTGGCTTAGAAGGATGA
TCAGCAATTTGGATTGCTGACCCGAATGGCAGCAATTCCAACAAAGGCGA
CGACCGAGATCTTCCTTTCACCCATCTCAAGGCGAAGAAGGCCATCAGAA
GAAGCATGCCGGTCTTGCCAACCTGGTGGTCCTCAATGCTGAGAGGAAGG
TCGGTTCCTTGGTGCGGACAGTGGGGTTGCATGAGCGTTTGCGGGTGTAG
CTGACGCAGCAGAGTTGGCCGGGGATGCAGGCTGCTTTTGTGCGGGCAAG
CAAGCGAAATGTTGGTGCTGAGTAGATGTTGCGGATGATTGCGGGCTGCG
TTAATCGCACCTACAAGCCTAAGGAGCAGAGAGGAAATGGATATGGCCAC
TCTGCTCTTTCGCATTACGGGACCCAATGGGCTTTATGCTCTCATGCAAA
TGCTTTATTTACCCCGCGAAAGCTACCTTTACGAGCGGTCAGTCATTGCC
GCCTTCGACCCCGTGATTCTCAAGCCTTTGTGGAGCTACGTGCAAGGTTT
GGTTAATGCTTCCATAGTCAACTTCCTTGCTTTTTTTTTTGAGCCTGTCT
TGAGGGGGGAGATGACGTAGGTGGAGGCCTACGAGAGGGGTTAGATGCTG
ATGATGGATGAGGTGGCTGATATTTATATATTGTGAGAGGTTGCGCTACT
TTCCCAATGCAGACTGTATTTTAAGTACCTTCGCTTTTCATCGTCCGCTG
CCTCTTGGCAGTCCTCAGCAGCATGACGAAGACAGGGCAGTCGTTCAATA
TACACGGAATGAAGAGGTGGGGAGCAGGATAATTGCAGTTAAAGGCGACA
AGCCTGTCGAGATCAAGCTATCGGCTTCCCTGTAGCAAATATCCCTGTGG
TGTGCCCGATGGACGGCCGCTCGAACGTGGTGTAGAGAGACGAAGTGGTG
CCTCACATCTTACCACATCTCTGTTGATGGGCGAAGGAATCAACAGTGGC
GTCGGCGTGGGTTGCATTGGTGGTGAAGGTTTCTGATCATATTTCTGGGA
GGAAGGACGAGACAGAGTACACGATGAAAGCAGACTAAAGCCAGCGTGAG
AGAGAGACAGGATCAGATCCGTTCAGCTCTGTTCCGTCTCTCACGCGGGC
TTCTGCTCTGATTTCGTCTTATCTGTCTCATCTCCTTCGCGTCAGAAATA
ACACCATTCTCTTTGGGGAGATGCAGCAGCTGGTGCCAGGATAGCTGGGC
ATGACCTTTTCATTATCCCTGGAAGAAATAGCGAGAGAGAGTAGCAGTGT
CCTTAAAAAGTATAAGACCGCTCTTGGCCCTTCGAAAGGGAGAAAATACA
AAGGAGAAGTAGAAGCGGACGGTGGAAGGAAGGGCGAATGGAGTGGAGGA
GGAAGAAGGAGAGGGGAAAGAACCAGAGGATGTTGATGAGGATGATGAGG
GGGAGAGTTGCAAAGGGGACAAGACCAAAGGAAAGGTGATGATAAAAGGA
TGGATATTTGTGACAGTGACAGCAGTGATGAAGAGGGAAATTTCAAGGGA
CAAGGGGGGGCGGGGGGAAGGAAACAGGTTATAGCAGCAGCAGCAGTGAT
TCCAACGACAGTGGGGACGATGCACGTCGAAGGAAGTGAGGAAGAAAGAA
AAGGCGAAGGTGACAGATGGGGTAGAAAAAAGAGAGAAAGGCAGAAAATC
AGAAAATATTGTTTATGTGTAGACATATATTTCTTCTATATCGCTCATAA
AGAAGTAGTATGTGAGTGTTGAT
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protein sequence of NO30G00700.1

>NO30G00700.1-protein ID=NO30G00700.1-protein|Name=NO30G00700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=102bp
MQQQLDKGNLGARINDNYIHGLFVRAAQIRRKGGLHHYLKPVKKSDHHRQ
QQQLLQQQRGGGGGDDGEREEEEKEEEQQQQQQQPSPAATMQRHLAKLPL
A*
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Synonyms
Publications