NO30G00650, NO30G00650 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO30G00650 vs. NCBI_GenBank
Match: KOO24118.1 (homogentisate phytyltransferase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 188.0 bits (476), Expect = 9.200e-44 Identity = 128/306 (41.83%), Postives = 162/306 (52.94%), Query Frame = 0 Query: 149 LTRLRHTLLVLWKFTRPHTFIGTALCVPTLHLFAAPAGLTLSQILTPRLLGSILWALLPAGLINVYITGLNQITDVSIDKINKPSLPLASGQLAPLLATLXXXXXXXXXXXXXXXRGSPFFSPSLL-LTLFLSAALGTAYSLPPLRLKRFPLLAALSIIAVRGTIINLGFYTHALAVAFPPSLPSPLPSTSTTTLPVLSSLRTILGPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIGLASAFFMVFGMVIALMKDVPDIEGDRQNRIYSFSVRQGATRVFGLALRITQILLVLTG 454 L R L VLW+F+RPHT +G+A+C+P L L+AAPAG LS LL +L+AL A L+NVYITGLNQ+ D+ ID+INKP LPLASG+L+P +L P+ S + L +TL SA LGT YS PP RLKRFPLLA+ II VRG ++N GF HA++VA + P + ++LP L+ FF +FG+VIAL+KDVPDI+GDRQ I SFSVR GA V L L + L LTG Sbjct: 74 LPRPSSLLRVLWRFSRPHTMLGSAVCIPALTLYAAPAGAALSL----PLLQGVLYALPAALLMNVYITGLNQLLDIEIDRINKPDLPLASGELSPFAGSLLVAGALVLSLGLGWWH--PWLSTNALRITLLGSAVLGTLYSAPPFRLKRFPLLASACIITVRGALVNWGFCAHAISVAAAAAGSLPSAALGWSSLP------------------------------------------------LRCWAPVGFFSLFGLVIALLKDVPDIKGDRQFGIRSFSVRIGAAAVLRLGLNLLTTTLALTG 325
BLAST of NO30G00650 vs. NCBI_GenBank
Match: CEM03342.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 183.3 bits (464), Expect = 2.300e-42 Identity = 130/308 (42.21%), Postives = 162/308 (52.60%), Query Frame = 0 Query: 156 LLVLWKFTRPHTFIGTALCVPTLHLFAAPAGLTLSQILTPRLLGSILWALLPAGLINVYITGLNQITDVSIDKINKPSLPLASGQLAPLLATLXXXXXXXXXXXXXXXRGSPFFSPSLLLTLFLSAALGTAYSLPPLRLKRFPLLAALSIIAVRGTIINLGFYTHALAVAFPPSLPSPLPSTSTTTLPVLSSLRTILGPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIGLASAFFMVFGMVIALMKDVPDIEGDRQNRIYSFSVRQGATRVFGLALRITQ---ILLVLTGGICVLAA 461 L LW FTRPHT IG+ALC+P LHLFA P G ++ L P LL SI WA LPA L+NVYITGLNQ+TD+ ID INKP LP+ S +L+ A + G P+ + L TL S LGT YSLPP RLKRFPLLAAL IIAVRG ++NLGFY HA + P + T+LG +L L + FF FG++IALMKD+PD++GDR I SFSVR G ++F R+T I L+ G+ +LA+ Sbjct: 129 LRTLWDFTRPHTLIGSALCIPALHLFAWPLGASVP--LQP-LLMSIFWATLPALLMNVYITGLNQVTDIEIDAINKPYLPIPSRRLSRRAAVIVVASSLALSLAVGF--GCPYSTGGLRWTLVGSMLLGTIYSLPPFRLKRFPLLAALCIIAVRGALVNLGFYAHATQGVYAPWFTD-------------APHATVLGTLLQDSGCL---------------------------------LTTLFFTWFGVLIALMKDIPDVQGDRAFDIASFSVRFGQRQMF----RLTSGGLIGLLAAAGVSLLAS 381
BLAST of NO30G00650 vs. NCBI_GenBank
Match: GAX18200.1 (homogentisate phytyltransferase / homogentisate geranylgeranyltransferase [Fistulifera solaris]) HSP 1 Score: 172.2 bits (435), Expect = 5.200e-39 Identity = 117/287 (40.77%), Postives = 153/287 (53.31%), Query Frame = 0 Query: 158 VLWKFTRPHTFIGTALCVPTLHLFAAPAGLTLSQILTPRLLGSILWALLPAGLINVYITGLNQITDVSIDKINKPSLPLASGQLAPLLATLXXXXXXXXXXXXXXXRGSPFF-SPSLLLTLFLSAALGTAYSLPPLRLKRFPLLAALSIIAVRGTIINLGFYTHALAVAFPPSLPSPLPSTSTTTLPVLSSLRTILGPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIGLASAFFMVFGMVIALMKDVPDIEGDRQNRIYSFSVRQGATRVFGLALR 444 +LWKFTRPHT IG+A+ +P+LH AAP +++ L+P S+L+A++P+ L+N+YITGLNQITDV ID+INKP LP+A+G L+ + T +P F + L L+ SA GT YSLPPLRLKRFP+ AA I+AVRG +IN F+ HA A AF T TT + L L +S FF VFG+VIALMKDVPD+ GD+ I +FSVR G VF +A+R Sbjct: 64 ILWKFTRPHTIIGSAMAIPSLHFLAAP---SIAAALSPLCWQSMLYAMIPSLLMNLYITGLNQITDVEIDRINKPDLPIAAGLLS--MKTAIAIVSLAFVGSVSMGIANPVFGTRGLNSALWASALFGTVYSLPPLRLKRFPIWAAFCIVAVRGLVINASFFAHAQAAAF---------QTPTTVIASLLGNAQCL-------------------------------------------WSSIFFAVFGLVIALMKDVPDVLGDQTLNIRTFSVRLGQKTVF-MAMR 292
BLAST of NO30G00650 vs. NCBI_GenBank
Match: XP_005768865.1 (hypothetical protein EMIHUDRAFT_56139, partial [Emiliania huxleyi CCMP1516] >XP_005793571.1 hypothetical protein EMIHUDRAFT_55059, partial [Emiliania huxleyi CCMP1516] >EOD16436.1 hypothetical protein EMIHUDRAFT_56139, partial [Emiliania huxleyi CCMP1516] >EOD41142.1 hypothetical protein EMIHUDRAFT_55059, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 171.8 bits (434), Expect = 6.800e-39 Identity = 116/280 (41.43%), Postives = 152/280 (54.29%), Query Frame = 0 Query: 158 VLWKFTRPHTFIGTALCVPTLHLFAAPAGLTLSQILTPRLLGSILWALLPAGLINVYITGLNQITDVSIDKINKPSLPLASGQLAPLLATLXXXXXXXXXXXXXXXRGSPFFSPSLLLTLFLSAALGTAYSLPPLRLKRFPLLAALSIIAVRGTIINLGFYTHALAVAFPPSLPSPLPSTSTTTLPVLSSLRTILGPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIGLASAFFMVFGMVIALMKDVPDIEGDRQNRIYSFSVRQGATRV 438 VLW+F+RPHT IG+ALC+P L L+AAP G +S + L +L+A++P+ L+NVYITGLNQ+ D+ ID++NKP+LPLASG+++P + P SP+L TL SA LGTAYS PP+RLKR PLLA+L I++VRG +IN GF+ HA A A+ S+ ST L GP+ AFF +FG VIAL+KDVPD+ GD + I SFSVR G RV Sbjct: 1 VLWRFSRPHTLIGSALCIPALSLYAAPPGAAISSAVFVPL---VLYAMVPSLLVNVYITGLNQLFDIPIDRVNKPTLPLASGEMSPAVGA-ATVLLCLAGGLALGWAFPPLCSPALRATLCGSALLGTAYSCPPVRLKRSPLLASLCIMSVRGALINWGFFAHA-AEAYGASV-------STAALQAW----RCAGPV-------------------------------------------AFFTLFGTVIALVKDVPDVPGDARYGIRSFSVRVGQARV 221
BLAST of NO30G00650 vs. NCBI_GenBank
Match: XP_002182033.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46573.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 171.8 bits (434), Expect = 6.800e-39 Identity = 122/300 (40.67%), Postives = 159/300 (53.00%), Query Frame = 0 Query: 157 LVLWKFTRPHTFIGTALCVPTLHLFAAPAGLTLSQILTPRLLGSILWALLPAGLINVYITGLNQITDVSIDKINKPSLPLASGQLAPL--LATLXXXXXXXXXXXXXXXRGSPFFS-PSLLLTLFLSAALGTAYSLPPLRLKRFPLLAALSIIAVRGTIINLGFYTHALAVAFPPSLPSPLPSTSTTTLPVLSSLRTILGPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIGLASAFFMVFGMVIALMKDVPDIEGDRQNRIYSFSVRQGATRVFGLALRITQILLVLTG 454 +VLW+F+RPHT IG+AL +P LH AAP +L ++ + ++ +A+ PA L+N+YITGLNQITDV IDKINKP LP+A+G L+ +AT+ +P FS L + L+ S LGT YSLPP RLKRFPLLAA I+AVRG IIN F+ HA A AF S + VL+ L T + L+S FF VFG+VIALMKDVPD+ GDR + + +FSVR G R+F + R+ L G Sbjct: 93 IVLWRFSRPHTLIGSALAIPALHSLAAP---SLQAAMSRINIQAMAYAMFPALLMNIYITGLNQITDVEIDKINKPFLPIAAGILSKKDGIATI----LLALFGSLWLGAANPVFSTQGLNVALWGSGILGTMYSLPPFRLKRFPLLAAFCIVAVRGAIINASFFAHAKAAAFGGS-----------GVTVLNCLAT----------------------------------------DPRCYLSSIFFAVFGIVIALMKDVPDVAGDRNSNVRTFSVRLGQGRIFQASRRLLSGLFWTVG 334
BLAST of NO30G00650 vs. NCBI_GenBank
Match: OEU14971.1 (homogentisate phytyltransferase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 169.1 bits (427), Expect = 4.400e-38 Identity = 114/281 (40.57%), Postives = 146/281 (51.96%), Query Frame = 0 Query: 158 VLWKFTRPHTFIGTALCVPTLHLFAAPAGLTLSQILTPRLLGSILWALLPAGLINVYITGLNQITDVSIDKINKPSLPLASGQLAPLLATLXXXXXXXXXXXXXXXRGSPFFSPSLLLTLFLSAALGTAYSLPPLRLKRFPLLAALSIIAVRGTIINLGFYTHALAVAFPPSLPSPLPSTSTTTLPVLSSLRTILGPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIGLASAFFMVFGMVIALMKDVPDIEGDRQNRIYSFSVRQGATRVF 439 VLW+FTRPHT IG+AL +P LH+ AA T T + + SIL+A +PA L+N+YITG+NQITDV IDKINKP LP+A+G L+ AT+ S + L + L +SA LGT YSLPP RLKRFP+LAA I+AVRG +IN GF+ HA AF S G IL + L+S +F VFG+VIAL+KDVPD++GD + I + +VR G VF Sbjct: 165 VLWRFTRPHTIIGSALAIPALHMLAA---TTYRDAFTVKTVLSILYATIPALLMNLYITGVNQITDVEIDKINKPDLPIAAGDLSMKNATIIVLVSLLLSVVLGVSIPS-LTTSGLTMALGVSAVLGTVYSLPPFRLKRFPVLAAFCIVAVRGGVINAGFFAHAKVAAFGGS-----------------------GSILHYLLTDP-----------------------------RCYLSSLYFAVFGVVIALIKDVPDVKGDNLSNIRTVAVRLGPNSVF 389
BLAST of NO30G00650 vs. NCBI_GenBank
Match: XP_005836176.1 (hypothetical protein GUITHDRAFT_52966, partial [Guillardia theta CCMP2712] >EKX49196.1 hypothetical protein GUITHDRAFT_52966, partial [Guillardia theta CCMP2712]) HSP 1 Score: 156.0 bits (393), Expect = 3.900e-34 Identity = 107/286 (37.41%), Postives = 141/286 (49.30%), Query Frame = 0 Query: 158 VLWKFTRPHTFIGTALCVPTLHLFAAPAGLTLSQILTPRLLGSILWALLPAGLINVYITGLNQITDVSIDKINKPSLPLASGQLAPLLATLXXXXXXXXXXXXXXXRGSPFFSP------SLLLTLFLSAALGTAYSLPPLRLKRFPLLAALSIIAVRGTIINLGFYTHALAVAFPPSLPSPLPSTSTTTLPVLSSLRTILGPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIGLASAFFMVFGMVIALMKDVPDIEGDRQNRIYSFSVRQGATRV 438 VLW FTRPHT IG+ L V +LHLFA A +S I + ++ W+L+ A L+N+++TGLNQI DV IDKINKP LP+ +G+L+ R F S SL+L + S LGT YS+PP RLKRFPLLAA+ II VRGT++NL FY H A+ LP+ + +AS+FF +FG VIALMKDVPD+ GDR+ ++ + SVR G+ V Sbjct: 2 VLWDFTRPHTIIGSILSVVSLHLFALTAP-GVSIINLSAFMVALTWSLVCASLVNLFVTGLNQIYDVDIDKINKPYLPIPAGELS---------LQKYMQVIMKNLRSEIFHSAKVIVLVSLILGIVRSCVLGTLYSMPPFRLKRFPLLAAICIIVVRGTLVNLSFYAHTAAILGTEMLPA------------------------------------------------------------RSWIASSFFALFGCVIALMKDVPDVSGDREFQVKTLSVRFGSRTV 217
BLAST of NO30G00650 vs. NCBI_GenBank
Match: CBJ48519.1 (tocopherol phytyltransferase [Ectocarpus siliculosus]) HSP 1 Score: 150.6 bits (379), Expect = 1.600e-32 Identity = 118/327 (36.09%), Postives = 149/327 (45.57%), Query Frame = 0 Query: 156 LLVLWKFTRPHTFIGTALCVPTLHLFAAPAGLTLSQILTPRLLGSILWALLPAGLINVYITGLNQITDVSIDKINKPSLPLASGQLAPLLATLXXXXXXXXXXXXXXXRGSPFFSPSLLLTLFLSAALGTA----------------------YSLPPLRLKRFPLLAALSIIAVRGTIINLGFYTHALAVAFPPSLPSPLPSTSTTTLPVLSSLRTILGPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIGLASAFFMVFGMVIALMKDVPDIEGDRQNRIYSFSVRQGATRVFGLALRITQILLVLTGGICVLAA 461 L LW+F+RPHT IGTA+ +P + +FA P G+ + R S+LWA++P+ LINVYITGLNQITDV IDKINKP LP+ +G L A L ++ L L A LG A RLKRFP +AAL I+ VRG+IIN GFY+HA + L + TLP + K LA A+F VF +VIALMKDVPD+EGDR I SFSV G T++F A R+ LL T G+ + A Sbjct: 60 LKTLWEFSRPHTMIGTAVAIPAIGVFAGPPGVLPGR----RFFLSMLWAMVPSLLINVYITGLNQITDVEIDKINKPYLPIPAGNLTSRAAKL-----------------------TVTLCLLAGAVLGLAPCSLGXXXXXXXXXXXXXXXXXXXXXXXRLKRFPQVAALCILVVRGSIINGGFYSHAQLAGY--GLSREKTALWALTLPFRDA---------------------------------------------KCALALAYFTVFAVVIALMKDVPDVEGDRMFNIPSFSVVLGETKLFAFARRLLTALLWSTAGVLGVGA 312
BLAST of NO30G00650 vs. NCBI_GenBank
Match: XP_005537338.1 (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >BAM81302.1 hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 146.7 bits (369), Expect = 2.300e-31 Identity = 104/315 (33.02%), Postives = 155/315 (49.21%), Query Frame = 0 Query: 152 LRHTLLVLWKFTRPHTFIGTALCVPTLHLF-AAPAGLTLSQILTP---RLLGSILWALLPAGLINVYITGLNQITDVSIDKINKPSLPLASGQLA-PLLATLXXXXXXXXXXXXXXXRGSPFFSPSLLLTLFLSAALGTAYSLPPLRLKRFPLLAALSIIAVRGTIINLGFYTHALAVAFPPSLPSPLPSTSTTTLPVLSSLRTILGPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIGLASAFFMVFGMVIALMKDVPDIEGDRQNRIYSFSVRQGATRVFGLALRITQILLVLTGGICVLAAV 462 +R L V KFTRPHT +G+A+ + +L L + AG L P +L +L L+PA L+N+YI GLNQ+ D+ +D++NKP LPLASG+L+ P +L P + +L L S LGT YSLPP+RLKRFPLLA+L I+ VRG ++N+GFY HA S++ ++ GP L I + FF +G+VIALMKD+PD +GD Q+++ SF+++ G +F + + + + G C+ +A+ Sbjct: 95 VRRALRVFLKFTRPHTMLGSAVSICSLSLMGSVSAGQALGAATLPLWTQLFPVLLVGLVPALLMNIYIVGLNQLCDIPVDRVNKPYLPLASGELSVPAAVSLVGMCLLGSFSLGFWL---PQSTAALRFALVASCILGTLYSLPPIRLKRFPLLASLCILVVRGAVVNIGFYLHA-----------------------RSAVMSLRGPWLAELSPL-------------------------------IKFTTVFFAAYGIVIALMKDIPDAKGDNQHQLSSFTLQFGERNIFRFCVTMLIFMFIAGGIFCMSSAL 352
BLAST of NO30G00650 vs. NCBI_GenBank
Match: WP_012408543.1 (homogentisate phytyltransferase [Nostoc punctiforme] >ACC80527.1 UbiA prenyltransferase [Nostoc punctiforme PCC 73102]) HSP 1 Score: 145.6 bits (366), Expect = 5.200e-31 Identity = 112/312 (35.90%), Postives = 147/312 (47.12%), Query Frame = 0 Query: 154 HTLLVLWKFTRPHTFIGTALCVPTLHLFA-APAGLTLSQILTPRLLGSILWALLPAGLINVYITGLNQITDVSIDKINKPSLPLASGQLAPLLATLXXXXXXXXXXXXXXXRGSPFFSPSLLLTLFLSAALGTAYSLPPLRLKRFPLLAALSIIAVRGTIINLGFYTHALAVAFPPSLPSPLPSTSTTTLPVLSSLRTILGPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIGLASAFFMVFGMVIALMKDVPDIEGDRQNRIYSFSVRQGATRVFGLALRITQI--LLVLTGGICVLAAVN 463 H L WKF+RPHT IGT+L V +L+L A A + T S TP L + A + NVYI GLNQ+ DV IDKINKP LPLASG+ + L G P L + +S A+GTAYSLPP+RLK+FP AAL I +VRGTI+NLG Y H S S T PV + + + F +VF IA+ KD+PDIEGDR I +F+++ G+ VF LAL + + L ++ G+ +A+VN Sbjct: 20 HWLYAFWKFSRPHTIIGTSLSVLSLYLIAIAISNNTASLFTTPGSLSPLFGAWIACLCGNVYIVGLNQLEDVDIDKINKPHLPLASGEFSQQTGQLIVASTGILALVMAWLTG-----PFLFGMVTISLAIGTAYSLPPIRLKQFPFWAALCIFSVRGTIVNLGLYLHY----------SWALKQSQTIPPV-------------------------------------------------VWVLTLFILVFTFAIAIFKDIPDIEGDRLYNITTFTIKLGSQAVFNLALWVITVCYLGIILVGVLRIASVN 267 The following BLAST results are available for this feature:
BLAST of NO30G00650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO30G00650 ID=NO30G00650|Name=NO30G00650|organism=Nannochloropsis oceanica|type=gene|length=2633bpback to top protein sequence of NO30G00650.1 >NO30G00650.1-protein ID=NO30G00650.1-protein|Name=NO30G00650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=627bpback to top Synonyms
Publications
|