NO30G00650, NO30G00650 (gene) Nannochloropsis oceanica

Overview
NameNO30G00650
Unique NameNO30G00650
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2633
Alignment locationchr30:244283..246915 +

Link to JBrowse

Properties
Property NameValue
DescriptionHomogentisate phytyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr30genomechr30:244283..246915 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR000537UbiA_prenyltransferase
Homology
BLAST of NO30G00650 vs. NCBI_GenBank
Match: KOO24118.1 (homogentisate phytyltransferase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 188.0 bits (476), Expect = 9.200e-44
Identity = 128/306 (41.83%), Postives = 162/306 (52.94%), Query Frame = 0
Query:  149 LTRLRHTLLVLWKFTRPHTFIGTALCVPTLHLFAAPAGLTLSQILTPRLLGSILWALLPAGLINVYITGLNQITDVSIDKINKPSLPLASGQLAPLLATLXXXXXXXXXXXXXXXRGSPFFSPSLL-LTLFLSAALGTAYSLPPLRLKRFPLLAALSIIAVRGTIINLGFYTHALAVAFPPSLPSPLPSTSTTTLPVLSSLRTILGPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIGLASAFFMVFGMVIALMKDVPDIEGDRQNRIYSFSVRQGATRVFGLALRITQILLVLTG 454
            L R    L VLW+F+RPHT +G+A+C+P L L+AAPAG  LS      LL  +L+AL  A L+NVYITGLNQ+ D+ ID+INKP LPLASG+L+P   +L                  P+ S + L +TL  SA LGT YS PP RLKRFPLLA+  II VRG ++N GF  HA++VA   +   P  +   ++LP                                                L+      FF +FG+VIAL+KDVPDI+GDRQ  I SFSVR GA  V  L L +    L LTG
Sbjct:   74 LPRPSSLLRVLWRFSRPHTMLGSAVCIPALTLYAAPAGAALSL----PLLQGVLYALPAALLMNVYITGLNQLLDIEIDRINKPDLPLASGELSPFAGSLLVAGALVLSLGLGWWH--PWLSTNALRITLLGSAVLGTLYSAPPFRLKRFPLLASACIITVRGALVNWGFCAHAISVAAAAAGSLPSAALGWSSLP------------------------------------------------LRCWAPVGFFSLFGLVIALLKDVPDIKGDRQFGIRSFSVRIGAAAVLRLGLNLLTTTLALTG 325          
BLAST of NO30G00650 vs. NCBI_GenBank
Match: CEM03342.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 183.3 bits (464), Expect = 2.300e-42
Identity = 130/308 (42.21%), Postives = 162/308 (52.60%), Query Frame = 0
Query:  156 LLVLWKFTRPHTFIGTALCVPTLHLFAAPAGLTLSQILTPRLLGSILWALLPAGLINVYITGLNQITDVSIDKINKPSLPLASGQLAPLLATLXXXXXXXXXXXXXXXRGSPFFSPSLLLTLFLSAALGTAYSLPPLRLKRFPLLAALSIIAVRGTIINLGFYTHALAVAFPPSLPSPLPSTSTTTLPVLSSLRTILGPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIGLASAFFMVFGMVIALMKDVPDIEGDRQNRIYSFSVRQGATRVFGLALRITQ---ILLVLTGGICVLAA 461
            L  LW FTRPHT IG+ALC+P LHLFA P G ++   L P LL SI WA LPA L+NVYITGLNQ+TD+ ID INKP LP+ S +L+   A +                G P+ +  L  TL  S  LGT YSLPP RLKRFPLLAAL IIAVRG ++NLGFY HA    + P                 +   T+LG +L                                       L + FF  FG++IALMKD+PD++GDR   I SFSVR G  ++F    R+T    I L+   G+ +LA+
Sbjct:  129 LRTLWDFTRPHTLIGSALCIPALHLFAWPLGASVP--LQP-LLMSIFWATLPALLMNVYITGLNQVTDIEIDAINKPYLPIPSRRLSRRAAVIVVASSLALSLAVGF--GCPYSTGGLRWTLVGSMLLGTIYSLPPFRLKRFPLLAALCIIAVRGALVNLGFYAHATQGVYAPWFTD-------------APHATVLGTLLQDSGCL---------------------------------LTTLFFTWFGVLIALMKDIPDVQGDRAFDIASFSVRFGQRQMF----RLTSGGLIGLLAAAGVSLLAS 381          
BLAST of NO30G00650 vs. NCBI_GenBank
Match: GAX18200.1 (homogentisate phytyltransferase / homogentisate geranylgeranyltransferase [Fistulifera solaris])

HSP 1 Score: 172.2 bits (435), Expect = 5.200e-39
Identity = 117/287 (40.77%), Postives = 153/287 (53.31%), Query Frame = 0
Query:  158 VLWKFTRPHTFIGTALCVPTLHLFAAPAGLTLSQILTPRLLGSILWALLPAGLINVYITGLNQITDVSIDKINKPSLPLASGQLAPLLATLXXXXXXXXXXXXXXXRGSPFF-SPSLLLTLFLSAALGTAYSLPPLRLKRFPLLAALSIIAVRGTIINLGFYTHALAVAFPPSLPSPLPSTSTTTLPVLSSLRTILGPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIGLASAFFMVFGMVIALMKDVPDIEGDRQNRIYSFSVRQGATRVFGLALR 444
            +LWKFTRPHT IG+A+ +P+LH  AAP   +++  L+P    S+L+A++P+ L+N+YITGLNQITDV ID+INKP LP+A+G L+  + T                  +P F +  L   L+ SA  GT YSLPPLRLKRFP+ AA  I+AVRG +IN  F+ HA A AF          T TT +  L      L                                            +S FF VFG+VIALMKDVPD+ GD+   I +FSVR G   VF +A+R
Sbjct:   64 ILWKFTRPHTIIGSAMAIPSLHFLAAP---SIAAALSPLCWQSMLYAMIPSLLMNLYITGLNQITDVEIDRINKPDLPIAAGLLS--MKTAIAIVSLAFVGSVSMGIANPVFGTRGLNSALWASALFGTVYSLPPLRLKRFPIWAAFCIVAVRGLVINASFFAHAQAAAF---------QTPTTVIASLLGNAQCL-------------------------------------------WSSIFFAVFGLVIALMKDVPDVLGDQTLNIRTFSVRLGQKTVF-MAMR 292          
BLAST of NO30G00650 vs. NCBI_GenBank
Match: XP_005768865.1 (hypothetical protein EMIHUDRAFT_56139, partial [Emiliania huxleyi CCMP1516] >XP_005793571.1 hypothetical protein EMIHUDRAFT_55059, partial [Emiliania huxleyi CCMP1516] >EOD16436.1 hypothetical protein EMIHUDRAFT_56139, partial [Emiliania huxleyi CCMP1516] >EOD41142.1 hypothetical protein EMIHUDRAFT_55059, partial [Emiliania huxleyi CCMP1516])

HSP 1 Score: 171.8 bits (434), Expect = 6.800e-39
Identity = 116/280 (41.43%), Postives = 152/280 (54.29%), Query Frame = 0
Query:  158 VLWKFTRPHTFIGTALCVPTLHLFAAPAGLTLSQILTPRLLGSILWALLPAGLINVYITGLNQITDVSIDKINKPSLPLASGQLAPLLATLXXXXXXXXXXXXXXXRGSPFFSPSLLLTLFLSAALGTAYSLPPLRLKRFPLLAALSIIAVRGTIINLGFYTHALAVAFPPSLPSPLPSTSTTTLPVLSSLRTILGPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIGLASAFFMVFGMVIALMKDVPDIEGDRQNRIYSFSVRQGATRV 438
            VLW+F+RPHT IG+ALC+P L L+AAP G  +S  +   L   +L+A++P+ L+NVYITGLNQ+ D+ ID++NKP+LPLASG+++P +                     P  SP+L  TL  SA LGTAYS PP+RLKR PLLA+L I++VRG +IN GF+ HA A A+  S+       ST  L          GP+                                           AFF +FG VIAL+KDVPD+ GD +  I SFSVR G  RV
Sbjct:    1 VLWRFSRPHTLIGSALCIPALSLYAAPPGAAISSAVFVPL---VLYAMVPSLLVNVYITGLNQLFDIPIDRVNKPTLPLASGEMSPAVGA-ATVLLCLAGGLALGWAFPPLCSPALRATLCGSALLGTAYSCPPVRLKRSPLLASLCIMSVRGALINWGFFAHA-AEAYGASV-------STAALQAW----RCAGPV-------------------------------------------AFFTLFGTVIALVKDVPDVPGDARYGIRSFSVRVGQARV 221          
BLAST of NO30G00650 vs. NCBI_GenBank
Match: XP_002182033.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46573.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 171.8 bits (434), Expect = 6.800e-39
Identity = 122/300 (40.67%), Postives = 159/300 (53.00%), Query Frame = 0
Query:  157 LVLWKFTRPHTFIGTALCVPTLHLFAAPAGLTLSQILTPRLLGSILWALLPAGLINVYITGLNQITDVSIDKINKPSLPLASGQLAPL--LATLXXXXXXXXXXXXXXXRGSPFFS-PSLLLTLFLSAALGTAYSLPPLRLKRFPLLAALSIIAVRGTIINLGFYTHALAVAFPPSLPSPLPSTSTTTLPVLSSLRTILGPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIGLASAFFMVFGMVIALMKDVPDIEGDRQNRIYSFSVRQGATRVFGLALRITQILLVLTG 454
            +VLW+F+RPHT IG+AL +P LH  AAP   +L   ++   + ++ +A+ PA L+N+YITGLNQITDV IDKINKP LP+A+G L+    +AT+                 +P FS   L + L+ S  LGT YSLPP RLKRFPLLAA  I+AVRG IIN  F+ HA A AF  S            + VL+ L T                                          +  L+S FF VFG+VIALMKDVPD+ GDR + + +FSVR G  R+F  + R+   L    G
Sbjct:   93 IVLWRFSRPHTLIGSALAIPALHSLAAP---SLQAAMSRINIQAMAYAMFPALLMNIYITGLNQITDVEIDKINKPFLPIAAGILSKKDGIATI----LLALFGSLWLGAANPVFSTQGLNVALWGSGILGTMYSLPPFRLKRFPLLAAFCIVAVRGAIINASFFAHAKAAAFGGS-----------GVTVLNCLAT----------------------------------------DPRCYLSSIFFAVFGIVIALMKDVPDVAGDRNSNVRTFSVRLGQGRIFQASRRLLSGLFWTVG 334          
BLAST of NO30G00650 vs. NCBI_GenBank
Match: OEU14971.1 (homogentisate phytyltransferase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 169.1 bits (427), Expect = 4.400e-38
Identity = 114/281 (40.57%), Postives = 146/281 (51.96%), Query Frame = 0
Query:  158 VLWKFTRPHTFIGTALCVPTLHLFAAPAGLTLSQILTPRLLGSILWALLPAGLINVYITGLNQITDVSIDKINKPSLPLASGQLAPLLATLXXXXXXXXXXXXXXXRGSPFFSPSLLLTLFLSAALGTAYSLPPLRLKRFPLLAALSIIAVRGTIINLGFYTHALAVAFPPSLPSPLPSTSTTTLPVLSSLRTILGPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIGLASAFFMVFGMVIALMKDVPDIEGDRQNRIYSFSVRQGATRVF 439
            VLW+FTRPHT IG+AL +P LH+ AA    T     T + + SIL+A +PA L+N+YITG+NQITDV IDKINKP LP+A+G L+   AT+                 S   +  L + L +SA LGT YSLPP RLKRFP+LAA  I+AVRG +IN GF+ HA   AF  S                       G IL                                    +  L+S +F VFG+VIAL+KDVPD++GD  + I + +VR G   VF
Sbjct:  165 VLWRFTRPHTIIGSALAIPALHMLAA---TTYRDAFTVKTVLSILYATIPALLMNLYITGVNQITDVEIDKINKPDLPIAAGDLSMKNATIIVLVSLLLSVVLGVSIPS-LTTSGLTMALGVSAVLGTVYSLPPFRLKRFPVLAAFCIVAVRGGVINAGFFAHAKVAAFGGS-----------------------GSILHYLLTDP-----------------------------RCYLSSLYFAVFGVVIALIKDVPDVKGDNLSNIRTVAVRLGPNSVF 389          
BLAST of NO30G00650 vs. NCBI_GenBank
Match: XP_005836176.1 (hypothetical protein GUITHDRAFT_52966, partial [Guillardia theta CCMP2712] >EKX49196.1 hypothetical protein GUITHDRAFT_52966, partial [Guillardia theta CCMP2712])

HSP 1 Score: 156.0 bits (393), Expect = 3.900e-34
Identity = 107/286 (37.41%), Postives = 141/286 (49.30%), Query Frame = 0
Query:  158 VLWKFTRPHTFIGTALCVPTLHLFAAPAGLTLSQILTPRLLGSILWALLPAGLINVYITGLNQITDVSIDKINKPSLPLASGQLAPLLATLXXXXXXXXXXXXXXXRGSPFFSP------SLLLTLFLSAALGTAYSLPPLRLKRFPLLAALSIIAVRGTIINLGFYTHALAVAFPPSLPSPLPSTSTTTLPVLSSLRTILGPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIGLASAFFMVFGMVIALMKDVPDIEGDRQNRIYSFSVRQGATRV 438
            VLW FTRPHT IG+ L V +LHLFA  A   +S I     + ++ W+L+ A L+N+++TGLNQI DV IDKINKP LP+ +G+L+                     R   F S       SL+L +  S  LGT YS+PP RLKRFPLLAA+ II VRGT++NL FY H  A+     LP+                                                            +  +AS+FF +FG VIALMKDVPD+ GDR+ ++ + SVR G+  V
Sbjct:    2 VLWDFTRPHTIIGSILSVVSLHLFALTAP-GVSIINLSAFMVALTWSLVCASLVNLFVTGLNQIYDVDIDKINKPYLPIPAGELS---------LQKYMQVIMKNLRSEIFHSAKVIVLVSLILGIVRSCVLGTLYSMPPFRLKRFPLLAAICIIVVRGTLVNLSFYAHTAAILGTEMLPA------------------------------------------------------------RSWIASSFFALFGCVIALMKDVPDVSGDREFQVKTLSVRFGSRTV 217          
BLAST of NO30G00650 vs. NCBI_GenBank
Match: CBJ48519.1 (tocopherol phytyltransferase [Ectocarpus siliculosus])

HSP 1 Score: 150.6 bits (379), Expect = 1.600e-32
Identity = 118/327 (36.09%), Postives = 149/327 (45.57%), Query Frame = 0
Query:  156 LLVLWKFTRPHTFIGTALCVPTLHLFAAPAGLTLSQILTPRLLGSILWALLPAGLINVYITGLNQITDVSIDKINKPSLPLASGQLAPLLATLXXXXXXXXXXXXXXXRGSPFFSPSLLLTLFLSAALGTA----------------------YSLPPLRLKRFPLLAALSIIAVRGTIINLGFYTHALAVAFPPSLPSPLPSTSTTTLPVLSSLRTILGPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIGLASAFFMVFGMVIALMKDVPDIEGDRQNRIYSFSVRQGATRVFGLALRITQILLVLTGGICVLAA 461
            L  LW+F+RPHT IGTA+ +P + +FA P G+   +    R   S+LWA++P+ LINVYITGLNQITDV IDKINKP LP+ +G L    A L                       ++ L L   A LG A                            RLKRFP +AAL I+ VRG+IIN GFY+HA    +   L     +    TLP   +                                             K  LA A+F VF +VIALMKDVPD+EGDR   I SFSV  G T++F  A R+   LL  T G+  + A
Sbjct:   60 LKTLWEFSRPHTMIGTAVAIPAIGVFAGPPGVLPGR----RFFLSMLWAMVPSLLINVYITGLNQITDVEIDKINKPYLPIPAGNLTSRAAKL-----------------------TVTLCLLAGAVLGLAPCSLGXXXXXXXXXXXXXXXXXXXXXXXRLKRFPQVAALCILVVRGSIINGGFYSHAQLAGY--GLSREKTALWALTLPFRDA---------------------------------------------KCALALAYFTVFAVVIALMKDVPDVEGDRMFNIPSFSVVLGETKLFAFARRLLTALLWSTAGVLGVGA 312          
BLAST of NO30G00650 vs. NCBI_GenBank
Match: XP_005537338.1 (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >BAM81302.1 hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 146.7 bits (369), Expect = 2.300e-31
Identity = 104/315 (33.02%), Postives = 155/315 (49.21%), Query Frame = 0
Query:  152 LRHTLLVLWKFTRPHTFIGTALCVPTLHLF-AAPAGLTLSQILTP---RLLGSILWALLPAGLINVYITGLNQITDVSIDKINKPSLPLASGQLA-PLLATLXXXXXXXXXXXXXXXRGSPFFSPSLLLTLFLSAALGTAYSLPPLRLKRFPLLAALSIIAVRGTIINLGFYTHALAVAFPPSLPSPLPSTSTTTLPVLSSLRTILGPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIGLASAFFMVFGMVIALMKDVPDIEGDRQNRIYSFSVRQGATRVFGLALRITQILLVLTGGICVLAAV 462
            +R  L V  KFTRPHT +G+A+ + +L L  +  AG  L     P   +L   +L  L+PA L+N+YI GLNQ+ D+ +D++NKP LPLASG+L+ P   +L                  P  + +L   L  S  LGT YSLPP+RLKRFPLLA+L I+ VRG ++N+GFY HA                        S++ ++ GP L                                     I   + FF  +G+VIALMKD+PD +GD Q+++ SF+++ G   +F   + +   + +  G  C+ +A+
Sbjct:   95 VRRALRVFLKFTRPHTMLGSAVSICSLSLMGSVSAGQALGAATLPLWTQLFPVLLVGLVPALLMNIYIVGLNQLCDIPVDRVNKPYLPLASGELSVPAAVSLVGMCLLGSFSLGFWL---PQSTAALRFALVASCILGTLYSLPPIRLKRFPLLASLCILVVRGAVVNIGFYLHA-----------------------RSAVMSLRGPWLAELSPL-------------------------------IKFTTVFFAAYGIVIALMKDIPDAKGDNQHQLSSFTLQFGERNIFRFCVTMLIFMFIAGGIFCMSSAL 352          
BLAST of NO30G00650 vs. NCBI_GenBank
Match: WP_012408543.1 (homogentisate phytyltransferase [Nostoc punctiforme] >ACC80527.1 UbiA prenyltransferase [Nostoc punctiforme PCC 73102])

HSP 1 Score: 145.6 bits (366), Expect = 5.200e-31
Identity = 112/312 (35.90%), Postives = 147/312 (47.12%), Query Frame = 0
Query:  154 HTLLVLWKFTRPHTFIGTALCVPTLHLFA-APAGLTLSQILTPRLLGSILWALLPAGLINVYITGLNQITDVSIDKINKPSLPLASGQLAPLLATLXXXXXXXXXXXXXXXRGSPFFSPSLLLTLFLSAALGTAYSLPPLRLKRFPLLAALSIIAVRGTIINLGFYTHALAVAFPPSLPSPLPSTSTTTLPVLSSLRTILGPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIGLASAFFMVFGMVIALMKDVPDIEGDRQNRIYSFSVRQGATRVFGLALRITQI--LLVLTGGICVLAAVN 463
            H L   WKF+RPHT IGT+L V +L+L A A +  T S   TP  L  +  A +     NVYI GLNQ+ DV IDKINKP LPLASG+ +     L                G     P L   + +S A+GTAYSLPP+RLK+FP  AAL I +VRGTI+NLG Y H           S     S T  PV                                                 + + + F +VF   IA+ KD+PDIEGDR   I +F+++ G+  VF LAL +  +  L ++  G+  +A+VN
Sbjct:   20 HWLYAFWKFSRPHTIIGTSLSVLSLYLIAIAISNNTASLFTTPGSLSPLFGAWIACLCGNVYIVGLNQLEDVDIDKINKPHLPLASGEFSQQTGQLIVASTGILALVMAWLTG-----PFLFGMVTISLAIGTAYSLPPIRLKQFPFWAALCIFSVRGTIVNLGLYLHY----------SWALKQSQTIPPV-------------------------------------------------VWVLTLFILVFTFAIAIFKDIPDIEGDRLYNITTFTIKLGSQAVFNLALWVITVCYLGIILVGVLRIASVN 267          
The following BLAST results are available for this feature:
BLAST of NO30G00650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
KOO24118.19.200e-4441.83homogentisate phytyltransferase [Chrysochromulina ... [more]
CEM03342.12.300e-4242.21unnamed protein product [Vitrella brassicaformis C... [more]
GAX18200.15.200e-3940.77homogentisate phytyltransferase / homogentisate ge... [more]
XP_005768865.16.800e-3941.43hypothetical protein EMIHUDRAFT_56139, partial [Em... [more]
XP_002182033.16.800e-3940.67predicted protein [Phaeodactylum tricornutum CCAP ... [more]
OEU14971.14.400e-3840.57homogentisate phytyltransferase [Fragilariopsis cy... [more]
XP_005836176.13.900e-3437.41hypothetical protein GUITHDRAFT_52966, partial [Gu... [more]
CBJ48519.11.600e-3236.09tocopherol phytyltransferase [Ectocarpus siliculos... [more]
XP_005537338.12.300e-3133.02hypothetical protein, conserved [Cyanidioschyzon m... [more]
WP_012408543.15.200e-3135.90homogentisate phytyltransferase [Nostoc punctiform... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR051ncniR051Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR102ngnoR102Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO30G00650.1NO30G00650.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|265140gene_9249Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO30G00650.1NO30G00650.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO30G00650 ID=NO30G00650|Name=NO30G00650|organism=Nannochloropsis oceanica|type=gene|length=2633bp
ATGGCCGCTGCATCCTCTTCGCCTGAACGCAGAGGAGGGGGTCGAGCTGC
CCACGGCCGTCGCCACGTCGCTTCCTGCTCACCCCTCCTCTTCCTTTTTC
TCCTTCTATGCGTAGCCTCACCAGCGTCCGAGGCATTTACTTCCCCAGCG
TCAGGGGCAGgtatgtttttgctatcggaggatgcggaggaagacaatca
agacataaaacctttctaacccccgctttccctgcatacccttaaaccag
GCCGGCGCGGGACACCACCAAGCTCTTCCGGAGCCATCTCGACAATATTG
AAGACTGTAGAGAGGATAGGGATGCGTGCGCGACCTTTATTTCTGCCCCT
GTCGTGCTCTTTGCCATCATCGAGACTCCACCCTCATCATCCCGGAAAAG
GCCCGGCCTCCCTCCTCTTGACAAGGTACACGGCTGCTTCTTCATGCTCC
TCCACGTCCTTCTCGCCTTCCTCCTCGACAGCCATGGCAGTAACCACCGC
TGGCACCGCACCTCCCTCCTCCTCTTCTTCCCGCCTCACCCGCCTGCGAC
ATACTCTCCTCGTCCTTTGGAAGTTCACCCGCCCCCACACCTTCATTGGC
ACGGCGCTCTGCGTCCCCACCCTCCACCTCTTCGCTGCGCCCGCCGGCCT
TACCCTGTCGCAAATCCTAACCCCTCGTCTGCTTGGCTCTATCCTCTGGG
CGCTGCTGCCGGCGGGCCTAATCAACGTCTACATCACAGGCTTAAATCAG
gttcgtcctggccctccctccctccctccctccctttctccctccttcct
tccatccttccctccttttatccaccttctcatccttcccatcatcacgc
tctgctggatgagcatgtccaagcaacatcacgtcattgcattattctga
cacacccacaaccccctcccctctctccccagATCACCGACGTCTCCATC
GACAAGATAAACAAGCCGTCCCTCCCCCTTGCGTCGGGTCAGCTGGCCCC
TCTCCTCGCCACCCTGACCGTCGGCCTCTCCCTCCTCCTCGGCCTCGGCC
TGGGCCTCCTGCGCGGTAGCCCCTTTTTCAGTCCCTCCCTCCTCCTCACC
CTCTTCCTATCCGCTGCTCTGGgtatgtccctcctgcatttccttcccct
tcccttccttcctccccatcacattcccctcttccagcccgtcatttcga
ccacacccatagatcttacctcccacgtacatttcccactcaccaaacac
ccgaccctccccccgccctcccctcctccctcagGCACGGCCTACTCCCT
CCCTCCTCTCCGCCTGAAGCGCTTCCCTCTCCTGGCAGCTCTCTCCATCA
TCGCCGTCCGTGGCACCATCATTAACCTCGGCTTCTACACCCACGCCCTC
GCCGTTGCATTCCCTCCCTCCCTCCCTTCCCCCCTGCCCTCCACGTCCAC
CACCACCCTCCCTGTCCTCTCCTCCCTCCGAACAATCCTGGGACCTATCC
TCCCCTCCCTCCCCCCCTTCCTCTCCTCCCTCCGGGCAGCAATGCAACCC
ATCCTGTCCGCCCTCTCCTCCCTCCTCCCTTCCCTCCCTTCCTTCCTCGC
CCCCGACCTGAAGATTGGCCTGGCCAGTGCCTTTTTCATGGTCTTCGGGA
TGGTGATCGCCCTGATGAAGGACGTGCCGGACATCGAGGGGGACCGACAG
AACCGAATATACTCCTTCTCGGTGCGGCAGGGCGCGACGCGGGTCTTCGG
CCTGGCCCTGAGGATCACGCAGATCTTGCTCGTCTTGACTGGCGGAATCT
GCGTCCTGGCGGCGGTGAACGCTGCCCTAGTGGCAGGAGGAGGAGCAGCA
GAAGCAGCAGCAGCAGCAGGAGCAGGTGCAGGAGTAGGGGCAGGAGTAGG
AAGGGTGGTGGCGGCGCTGAAGAGTGCTTCGCTGGGAGGACGAGGGGGCA
GGGTGGGAGGGCGGGCGGTCGTCGCGGTTCTGGCCTGGGGGGCTGCGATG
GCGGTGGGGAGGAAGGGAGGGAAGGTGAATGTGGAAGGGGGAGGAGGGAA
GGGAGGGGAGGGGGGGGAGGTGTACAGGTTCTACATGTTTCTGTGGAAGT
TATTTTATTTGAGCTATGCTCTCTTGCCATTGGCGAGgtgagggagggag
ggaaggagggagggaaacggctgggaaagtctatggagaaaccaaaatag
gtgatgggggataagggagggaggaagggaaggaatgtgggagggaggca
gggtgaaatgagtgaatgtagtcttggcggcgcagggagtatggtgctcg
ctcttgtcggaggctcttcgcgctagcttgactgctgaaggaggggattg
aggaatgggcggacggacggaggaatttaaattttgatttgtgttggtga
aaggggggacgggagggagtagatagaatcttacaagagcagtgactgac
agcagCCGCAGCAGCAGTTCAAGAGGTTGTAACGGCAGCAGCAGCGACAG
CAGTAGCAGCAGTAGCAGTAATAGCATTAATAATGGTCGCAGCAGCAGCA
GCAGCAGCAACAGCAGCGGCGGCGGCGGCAGCGACAGCAACAGCGGCGGT
GGCGGTGGCGGCAGCGGCAAGTTGGGGAAGTGA
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protein sequence of NO30G00650.1

>NO30G00650.1-protein ID=NO30G00650.1-protein|Name=NO30G00650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=627bp
MAAASSSPERRGGGRAAHGRRHVASCSPLLFLFLLLCVASPASEAFTSPA
SGAGRRGTPPSSSGAISTILKTVERIGMRARPLFLPLSCSLPSSRLHPHH
PGKGPASLLLTRYTAASSCSSTSFSPSSSTAMAVTTAGTAPPSSSSSRLT
RLRHTLLVLWKFTRPHTFIGTALCVPTLHLFAAPAGLTLSQILTPRLLGS
ILWALLPAGLINVYITGLNQITDVSIDKINKPSLPLASGQLAPLLATLTV
GLSLLLGLGLGLLRGSPFFSPSLLLTLFLSAALGTAYSLPPLRLKRFPLL
AALSIIAVRGTIINLGFYTHALAVAFPPSLPSPLPSTSTTTLPVLSSLRT
ILGPILPSLPPFLSSLRAAMQPILSALSSLLPSLPSFLAPDLKIGLASAF
FMVFGMVIALMKDVPDIEGDRQNRIYSFSVRQGATRVFGLALRITQILLV
LTGGICVLAAVNAALVAGGGAAEAAAAAGAGAGVGAGVGRVVAALKSASL
GGRGGRVGGRAVVAVLAWGAAMAVGRKGGKVNVEGGGGKGGEGGEVYRFY
MFLWKLFYLSYALLPLASRSSSSRGCNGSSSDSSSSSSSNSINNGRSSSS
SSNSSGGGGSDSNSGGGGGGSGKLGK*
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Synonyms
Publications