NO30G00470, NO30G00470 (gene) Nannochloropsis oceanica

Overview
NameNO30G00470
Unique NameNO30G00470
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3527
Alignment locationchr30:194413..197939 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr30genomechr30:194413..197939 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO30G00470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Position :
0
Zoom :
x 1
500100015002000250030003500Sequence
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR051ncniR051Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR102ngnoR102Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO30G00470.1NO30G00470.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|605935gene_9273Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO30G00470.1NO30G00470.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO30G00470 ID=NO30G00470|Name=NO30G00470|organism=Nannochloropsis oceanica|type=gene|length=3527bp
GTTGTTTATTCCCCGCTGCAGGAGGGACACAGGTAACCTGTCATGCATGG
TGCCGGAGGAGGGAAGCTGTCAGACAGTTATTTCTTTTGGAGTCTTAAGC
AGTCCTTCCTCTCTTACTACTTCGCGAGTCGTGCTTCCGCTGTTGTTCCA
CTTTACTGGTGCTTTGAGTGGAGTGCGCTCGCCGCCTTACGCGGCTCAGT
CTCTACGGGCGTGTGTCCATCAGGTGGCACAGAGCTCACAAGCGGCCGGT
ACACGTGCCTCTGGCCCACCTCTCGAGACTGTAGTCATACGTGTCAGTCT
ACGAGAAGCAAGACTTTCCTGTCCCCTTGATTCATCTCTCCTTCTTCTCC
CCCCCTCTGCCTGCCGCCGCACCTTCTGCAGCTGAACCAGGTAGTCGCGA
CAGAAAGCGAAGTACCGAGGCTTCTCGAACGAGCCCCTGAAGAAGTTGCA
CGACAAATTCACCTCCAACAAGAACTCCCCCGTGCTAGTGAGCGCCACGT
CCCATCCCACGAAAGGCACGTCAGGCAGCATCAAGAAGTGGGCCCGGCAG
ACAAGAGCGCGCAAGGCCGCCATGTCCGCGTGGATGTGCCGCCCCGTCAC
CACCAGGCCAGGCGCGTCGGGGTGCGTGTTTGTGGTGTAGGTGGACCGCC
ACGCCGTGCGGAAGGGCTTCCCCACACCCAGCTCGTACCAGTGGGCGTTG
ATGGAGCCTTCACATATCAGGCCGGTCGTCACATCCACATCGAAGAGGAT
GGAGGAGTGGTCCGTGGCGGCGCCTGTTCGCCCTGCCCTGAAGACACAGG
AGAGCGCCTCGATGTGGTTGGCGGGCAAGTTGGCAAAGCCCTCGTCGGTG
GCGGGCCGGCCCACACGGGGATCGTCGGGTGTGAGGCCGCCTCGGGAGGC
GGTGATGACGCGGAGGGTGGAGAGGGGGGCGTTGGGCGGGAGGAGGTGCT
CGCGGAGAAAGTCCGAGTTTTGGAGACGTTCTTGGATGATCCAGTCCCCG
CCGGCCAGTGCATTTTTGTAAAAGTAGATGCCCAAGCCACCCTCCTCATT
TTTGTTCTTGACCACAATGCTTGCCGTCTTGAGCACGGGCGAGACGGGCA
CACCCAGCCGGTCCCCGTCCATCAAAAAGGTCCATTTGTCTTCCTGCGCG
TAGCCAGGGCTGTGCGTGAGCAGCTCATGGTAGGCCGCGATGCGGGAGTT
GAGCCGCCAGAAATTAAACCAATCCTCAGGTGTCAATAAATGCTCCCGAA
AGGCCTCGGTCAAAGCCGCGTACTTGCCCTGGGACTTTGGCGCCGTGCGG
GCCACATTCACCGCCCCCAGGAAGGCCACCACCGGGTACAGAAGGGTGAA
GAACAGGTAGGCTAAGGGCTTGGCTACGCAGAAAAAGCTCAAGGGGAGGC
CCGTTCCCGGCACCGCCACGTTGCACAGATTCGCCAAGAGGTCATGACGG
TAGGTTGGCGCCCGGTAATGCGGTCGGTCCCACAGGTACAGGTCGAGCCA
GAGGCCATAGACGTGCACCTTGGCGGGCAAGTCTTGCTCGCGCTTCAGAA
ACGGACAGCCCTCAAAGTCGCCGCTTGAACGCCAAAAGTAGAAAAATACT
CGCCAATAAGTCAGCAATGTGGCTATGAGTGCCCACATGTGCTGTTTTAC
TGTGATATGTGGGGGCTAAAGGTGGCGTTGGTGCGTACGTACGTGGCTTG
CTTGGGAAAGCCGACGAGGGGTGGGGAGGTCGACTAAGGTTGATTGGATG
GGTATGGTGGGCAAGCCGGCTAGTACAGCAAGCCTGTGGGTTGAGTTTTT
TTGAATGTTGGTTGAGCATAGTGGTAATGCGTGGTGACTTGAGTTTCGTA
GGCCGACGGCATTCATCGCCAAGCAACTGCAATCATCGATGACGTGCCCG
AAATCTTGGCCTCATAACGGGGTGTGTTGCTTAAAATCATTTCTGCACAC
CCACGCACACCCACCACACAGCCAGCCCACAACAACCGCAATACTTAGGA
TACCACACCAGTGTCTGAATCGCTCAGAGCCTTTACTTTCTGTCCATCAA
ACCAAACCCATCGAGGAACAGCAGGGCAACAACACCCACACGACACCACC
ATGGACACGGAGGAAGCAGCGCCTGTGCCCTCGACGGTGGTGCAAGGAGG
GGCCAGGAAGATGTCGCGCTTTGGTGCTGTCTCCTCCCGgtacgtagcat
gcagcagtcggaagcgggtcaggattgcttagcttgatccaaggtgcaat
ctctcctcacgacgactagcgtactattccctaccctacttactccttac
ccttttcctcgtagGCGCTGGGCCGATAGCGACGACGACGAGACCCAAAA
TGAAGGGGGTTCGATGAAGGGGTTAGAAGAGgtgcgtacctgtaaaacaa
tattctgggtcactacaatttgcgtccccctctcgcccaagtggcagata
ttccaagtgtctacatggaatttattatccatctccatcccctcaactcc
acaaatgccgcccgtgcacagAGCGATGACGATGACGACATTTCCTCAAC
GTCCTCCTCTTCATCCTCGGACAACGAGGACGAGGATTCGAATAAGGCGG
CAGGGGGCATGCCTTGTTTCCCGTCCAACATCTCCTCCGCCCCTGAGGCC
CCGGCTCTCAGCAGTAAGGGGGCAGCAACGGCGACTACAGTCATGCGACG
GCCCCTGACCAAGAAGGAGCGACAGGAACAGAAGAAGAAGGAACTGGAGG
AGCTGGACGACCTTCTCGGGGCCTTTGGCTTGGAGAGTGGGTCACCATCC
CCCACCACGGAGAAGGAGGAGGAGGACCCCGTGTCGTCGTCGACCGACAC
CTCCCCCATCAAGGAGAGCAGGGCTATGGAGAGGGAACATGAGGCCCAGG
GCCCCGGGAAAGACGGGAACGATGAGGGCAAGAAGGATAGGGATAAGAAA
AAGAAAAAGAAGAAGAAGAAACCGGCTGCCACGGGCGGAAAGGCCGACGA
CGAGACCGAGCCCTCGGCCACAGCCATGACACCGGAGGAGGTGGCGGCGC
GGCTCAAGATTAAAAAGGCAGCAGCCTTGAAAAAGAAGGGGCCATCGCGC
ACCTCGGCGGCAGCAGCCGTTGCAGTAGCAGCGGCTGCAGGGGTGGGAGG
AAAGAAGCGGAAGGATAAAAAGGGTTACTACAACGAGATGCCGACCCGAT
GAGCGATGCTGAGACGACACCTTGGTGTGACGACAGTTAGGCCGCGTGCC
ATGTGGGCGAGGATACACAACAGTACTTCTGTGTTTGTCGCAGTAGGCAG
AGAGTAGAAAGCATCCAGACTCGACCATGGGGGACGGTGGGCGTTGTGGT
AGGCGAGATTGCTCCCTCGAGGATGAGAGAGGGAGCGGCGAGAAATGAAT
AGGGAAATAGAGACAGGTTCTAGATGAAACTAAAGAAATGTGACAAGAAG
TCAAGAGCGGGAGGCTGGGCTAGGGCGATGAGGGGGATGACGATTATCCC
TCTCTTTTTCTCTTTGTGCAGATCTCA
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protein sequence of NO30G00470.1

>NO30G00470.1-protein ID=NO30G00470.1-protein|Name=NO30G00470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=279bp
MDTEEAAPVPSTVVQGGARKMSRFGAVSSRRWADSDDDETQNEGGSMKGL
EESDDDDDISSTSSSSSSDNEDEDSNKAAGGMPCFPSNISSAPEAPALSS
KGAATATTVMRRPLTKKERQEQKKKELEELDDLLGAFGLESGSPSPTTEK
EEEDPVSSSTDTSPIKESRAMEREHEAQGPGKDGNDEGKKDRDKKKKKKK
KKPAATGGKADDETEPSATAMTPEEVAARLKIKKAAALKKKGPSRTSAAA
AVAVAAAAGVGGKKRKDKKGYYNEMPTR*
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Synonyms
Publications