NO30G00460, NO30G00460 (gene) Nannochloropsis oceanica

Overview
NameNO30G00460
Unique NameNO30G00460
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3575
Alignment locationchr30:190228..193802 +

Link to JBrowse

Properties
Property NameValue
DescriptionLong-chain acyl-synthetase 7
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr30genomechr30:190228..193802 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR000873AMP-dep_Synth/Lig
Homology
BLAST of NO30G00460 vs. NCBI_GenBank
Match: EWM20588.1 (long-chain acyl- synthetase 7 [Nannochloropsis gaditana])

HSP 1 Score: 932.6 bits (2409), Expect = 5.600e-268
Identity = 441/472 (93.43%), Postives = 463/472 (98.09%), Query Frame = 0
Query:    1 MVYVPHRKKFYSVEVPNTETATSGPIRRFPDGEINPQLAYDGCYTIYELFRRSVAVYPHRPFLGHRPIDSEGNAAPYVFESYEEAARRVDHLASALEHEDLCPATPDGLRLLGLYMKNCPEWILADQAAFTIHGATVPLYDTLGPDAVGYIIQQTELSTVVCGPQELENLVAAAPKCPSLKAAVLICPVLSDHHRALARKGGLKLYSLLDLEKLGFRYPQPHLPPDPEDVATFSYTSGTTGGPKGALLTHRNFLTVYCAGKALEVENFPDDIHFSYLPLPHVFERVMLLAVLGNGAAMGFWQGAPEKLVDDMQALRPTCMPAVPRVLNRMYDKVMAGVRASSPLKQALFQRAYAAKLRDLEERCELSKGVWDKLVFAKVRRAIGLDRMRVMVTGSAPIAPHVLQFMRVLCACPIHEGYGQTETTAMTSLTFPGDWTTGHVGGVAPVSEVRLVDVPEMGYLHTDRQHGGSGRG 473
            MVYVPHRKKFYS+EVPNTETAT+GPIRRFPDGEINPQLAYDGCYTIYELFRRSVA+YPHRPFLGHRPIDSEG+AAPYVFESYEEAARR+D+LASALEHE LCP TPDGLRLLGLYMKNCPEWI+ADQAAFT+HGATVPLYDTLGPDAVGY+I+QTEL+ VVCGPQELENLVAAAP+CPSLKAAVL C VLSDHHRALARKGGLKLYSL+DLEKLGFRYPQPH PPDP+DVATFSYTSGTTGGPKGALLTHRNFLTVYCAGKALEVENFPDDIHFSYLPLPHVFERVMLLAVLGNGAAMGFWQG+PE+LV+D+QALRPTCMPAVPRVLNRMYDKVMAGVRA+SPLKQ LFQRAYAAKLRDL+ER ELSKGVWD+LVFAKVRRAIGLDRMRVMVTGSAPIAPHVLQFMRVLCACPIHEGYGQTETTAMTSLTFPGDWTTGHVGGVAPVSEVRLVDVPEMGYLHTDRQHG +GRG
Sbjct:    1 MVYVPHRKKFYSIEVPNTETATAGPIRRFPDGEINPQLAYDGCYTIYELFRRSVAIYPHRPFLGHRPIDSEGHAAPYVFESYEEAARRIDNLASALEHEGLCPPTPDGLRLLGLYMKNCPEWIIADQAAFTLHGATVPLYDTLGPDAVGYVIKQTELAAVVCGPQELENLVAAAPECPSLKAAVLTCSVLSDHHRALARKGGLKLYSLMDLEKLGFRYPQPHFPPDPDDVATFSYTSGTTGGPKGALLTHRNFLTVYCAGKALEVENFPDDIHFSYLPLPHVFERVMLLAVLGNGAAMGFWQGSPERLVEDLQALRPTCMPAVPRVLNRMYDKVMAGVRAASPLKQMLFQRAYAAKLRDLDERGELSKGVWDRLVFAKVRRAIGLDRMRVMVTGSAPIAPHVLQFMRVLCACPIHEGYGQTETTAMTSLTFPGDWTTGHVGGVAPVSEVRLVDVPEMGYLHTDRQHGSAGRG 472          
BLAST of NO30G00460 vs. NCBI_GenBank
Match: CBN78354.1 (long chain acyl-coA synthetase [Ectocarpus siliculosus])

HSP 1 Score: 407.9 bits (1047), Expect = 4.800e-110
Identity = 219/424 (51.65%), Postives = 285/424 (67.22%), Query Frame = 0
Query:   84 EAARRVDHLASALEHEDLCPATPDGLRLLGLYMKNCPEWILADQ------------------AAFTIHGATVPLYDTLGPDAVGYIIQQTELSTVVC-GPQELENLVAAAP--KCPSLKAAVLICPVLSDHHRALARKGGLKLYSLLDLEKLGFRYPQPHLPPDPEDVATFSYTSGTTGGPKGALLTHRNFLTVYCAGKALEVENFPD-DIHFSYLPLPHVFERVMLLAVLGNGAAMGFWQGAPEKLVDDMQALRPTCMPAVPRVLNRMYDKVMAGVRASSPLKQALFQRAYAAKLRDLEERCELSKGVWDKLVFAKVRRAIGLDRMRVMVTGSAPIAPHVLQFMRVLCACPIHEGYGQTETTAMTSLTFPGDWTTGHVGGVAPVSEVRLVDVPEMGYLHTDRQHGG----SGRGAE--EGRGE 480
            E   RVD+ AS LE E L P  PDG++LL LY +N PEWI+A+Q                  AAF     TVPLYDTLGP+ V ++I QT L+TVVC G  EL  LVA A   +CPSLK  V++   +S+  R  A + GL++Y+  ++E +G  +  PH PP P D+ATF YTSGTTG PKGALLTHRNF+    A + +E  N    D++ SYLPLPH+FER++ +A+L  GAA+G ++G P  LV+DMQALRPT M AVPRVLNR++DK++ G+ A+  LK  LF +A  AK++ L E   L+  +WDKLVF K++ A+GLDR+++MVTGSAP+A HVL FMR+L   P+ EGYGQTETTA +++T  GD++ GHVGG    +E+ L DVPEMGY HTD  HGG    +G G E  EGRGE
Sbjct:   39 EVEERVDNFASGLEQEGLTPPNPDGMKLLALYSRNRPEWIIAEQGGISYPSDSGTPIRILMKAAFAHSALTVPLYDTLGPETVEFVITQTSLTTVVCSGVAELRKLVAIADGGRCPSLK-TVVVMDGISERERREAVRAGLRVYAFAEVEGIGASHAHPHRPPGPNDLATFCYTSGTTGNPKGALLTHRNFIADSAAAELMETFNADSTDVYLSYLPLPHIFERMVQVAILNVGAAVGIFRGDPTLLVEDMQALRPTVMAAVPRVLNRLHDKIVQGMLAAGGLKTKLFVKACEAKVQGLHEG-RLTHALWDKLVFGKIKAALGLDRIQMMVTGSAPVAAHVLTFMRILIGVPLLEGYGQTETTAGSTMTQSGDFSVGHVGGPFSCTEICLKDVPEMGYRHTDTWHGGDPRDAGGGGEACEGRGE 460          
BLAST of NO30G00460 vs. NCBI_GenBank
Match: XP_002293417.1 (Long-chain-fatty-acid--CoA ligase [Thalassiosira pseudonana CCMP1335] >EED89153.1 Long-chain-fatty-acid--CoA ligase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 403.7 bits (1036), Expect = 9.100e-109
Identity = 222/477 (46.54%), Postives = 295/477 (61.84%), Query Frame = 0
Query:   11 YSVEVPNTETAT-SGPIRRFPDGEINPQLAYDGCYTIYELFRRSVAVYPHRPFLGHRPIDS-EGNAAPYVFESYEEAARRVDHLASALEH---EDLCPATPDGLRLLGLYMKNCPEWILADQAAFTIHGATVPLYDTLGPDAVGYIIQQTELSTVVCGPQELENLVAA--APKCPSLKAAVLICPVLSDHHRALARKGGLKLYSLLDLEKLGFRY----PQPHLPPDPEDVATFSYTSGTTGGPKGALLTHRNFLTVYCAGKALEVENFPDDIHFSYLPLPHVFERVMLLAVLGNGAAMGFWQGAPEKLVDDMQALRPTCMPAVPRVLNRMYDKVMAGVRASSPLKQALFQRAYAAKLRDLEERCELSKGVWDKLVFAKVRRAIGLDRMRVMVTGSAPIAPHVLQFMRVLCACPIHEGYGQTETTAMTSLTFPGD-WTTGHVGGVAPVSEVRLVDVPEMGYLHTDRQHGGS---GRG 473
            +S+EVP+T   T  GPI R PD    P L   G  T+YE  RR   V P  P LG R   S  G A PYV+ SY E   R+D +A  LE    E L     DG+ LLG+YMKNC EWILA+QA + I GATVP YDTLGPD V +I++ T +S VVC  +ELE L  A  +  CP   + +L+  V +     +A   GLK+ S   +E LG +        H PPDP+D+ATF YTSGTTG PKGAL+TH N ++    G   E+   P D H SYLPLPH+FERV++  +L +GA++ F++G P  L++D+ A RPT +P VPRVLN+++DK++AG+ A   + + LF+ A  AK   L+E   L   +WD+++F K++RA+GLD +R+MV+GSAP++P V+ F R L   P+ EGYGQTE  A  +++ P D  + GHVGG     E+ L DVPEMGYL TD  H G    GRG
Sbjct:    5 WSIEVPSTSRPTHRGPIHRSPDPLATPTLGAHGVRTLYEAIRRGRDVNPLGPCLGFRATSSNSGYATPYVYGSYGECVARIDAVACGLERGGGERLLDRNEDGMLLLGIYMKNCMEWILAEQAVYCIGGATVPFYDTLGPDTVRFILEHTGMSCVVCSRKELERLCEAKKSGTCPKFHSVILVDGVTA-QATDMANGAGLKVVSFAKIEALGAQIVPTEGHKHTPPDPKDIATFCYTSGTTGDPKGALITHENIMS--AVGGLNEIPILPTDRHISYLPLPHIFERVVVAQMLTSGASIAFFRGDPLLLIEDIVACRPTMVPMVPRVLNKIHDKIVAGMAAKGGVTEKLFKMAMEAKTLGLQEG-RLKHPLWDRILFNKIKRALGLDCVRLMVSGSAPLSPKVMIFFRCLLGVPVMEGYGQTEGAAAATISHPDDIASVGHVGGPTDCVEIVLEDVPEMGYLSTDTSHNGEPCRGRG 477          
BLAST of NO30G00460 vs. NCBI_GenBank
Match: AAW58006.1 (long chain acyl-coA synthetase [Thalassiosira pseudonana])

HSP 1 Score: 401.4 bits (1030), Expect = 4.500e-108
Identity = 221/477 (46.33%), Postives = 295/477 (61.84%), Query Frame = 0
Query:   11 YSVEVPNTETAT-SGPIRRFPDGEINPQLAYDGCYTIYELFRRSVAVYPHRPFLGHRPIDS-EGNAAPYVFESYEEAARRVDHLASALEH---EDLCPATPDGLRLLGLYMKNCPEWILADQAAFTIHGATVPLYDTLGPDAVGYIIQQTELSTVVCGPQELENLVAA--APKCPSLKAAVLICPVLSDHHRALARKGGLKLYSLLDLEKLGFRY----PQPHLPPDPEDVATFSYTSGTTGGPKGALLTHRNFLTVYCAGKALEVENFPDDIHFSYLPLPHVFERVMLLAVLGNGAAMGFWQGAPEKLVDDMQALRPTCMPAVPRVLNRMYDKVMAGVRASSPLKQALFQRAYAAKLRDLEERCELSKGVWDKLVFAKVRRAIGLDRMRVMVTGSAPIAPHVLQFMRVLCACPIHEGYGQTETTAMTSLTFPGD-WTTGHVGGVAPVSEVRLVDVPEMGYLHTDRQHGGS---GRG 473
            +S+EVP+T   T  GPI R PD    P L   G  T+YE  RR   V P  P LG R   S  G A PYV+ SY E   R+D +A  LE    E L     DG+ LLG+YMKNC EWILA+QA + I GATVP YDTLGPD V +I++ T +S VVC  +ELE L  A  +  CP   + +L+  V +     +A   GLK+ S   +E LG +        H PPDP+D+ATF YTSGTTG PKGAL+TH + ++    G   E+   P D H SYLPLPH+FERV++  +L +GA++ F++G P  L++D+ A RPT +P VPRVLN+++DK++AG+ A   + + LF+ A  AK   L+E   L   +WD+++F K++RA+GLD +R+MV+GSAP++P V+ F R L   P+ EGYGQTE  A  +++ P D  + GHVGG     E+ L DVPEMGYL TD  H G    GRG
Sbjct:    5 WSIEVPSTSRPTHRGPIHRSPDPLATPTLGAHGVRTLYEAIRRGRDVNPLGPCLGFRATSSNSGYATPYVYGSYGECVARIDAVACGLERGGGERLLDRNEDGMLLLGIYMKNCMEWILAEQAVYCIGGATVPFYDTLGPDTVRFILEHTGMSCVVCSRKELERLCEAKKSGTCPKFHSVILVDGVTA-QATDMANGAGLKVVSFAKIEALGAQIVPTEGHKHTPPDPKDIATFCYTSGTTGDPKGALITHEDIMS--AVGGLNEIPILPTDRHISYLPLPHIFERVVVAQMLTSGASIAFFRGDPLLLIEDIVACRPTMIPMVPRVLNKIHDKIVAGMAAKGGVTEKLFKMAMDAKTLGLQEG-RLKHPLWDRILFNKIKRALGLDCVRLMVSGSAPLSPKVMIFFRCLLGVPVMEGYGQTEGAAAATISHPDDIASVGHVGGPTDCVEIVLEDVPEMGYLSTDTSHNGEPCRGRG 477          
BLAST of NO30G00460 vs. NCBI_GenBank
Match: GAX14588.1 (long-chain acyl-CoA synthetase [Fistulifera solaris])

HSP 1 Score: 392.1 bits (1006), Expect = 2.700e-105
Identity = 206/474 (43.46%), Postives = 294/474 (62.03%), Query Frame = 0
Query:   11 YSVEVPNTETATSGPIRRFPDGEINPQLAYDGCYTIYELFRRSVAVYPHRPFLGHRPIDSEGNAAPYVFESYEEAARRVDHLASALEHEDLCPATPDGLRLLGLYMKNCPEWILADQAAFTIHGATVPLYDTLGPDAVGYIIQQTELSTVVCGPQELENLVA---AAPKCPSLKAAVLICPVLSDHHRALARKGGLKLYSLLDLEKLGFR----YPQPHLPPDPEDVATFSYTSGTTGGPKGALLTHRNFLTVYCA-GKALEVENFPDDIHFSYLPLPHVFERVMLLAVLGNGAAMGFWQGAPEKLVDDMQALRPTCMPAVPRVLNRMYDKVMAGVRASSPLKQALFQRAYAAKLRDLEERCELSKGVWDKLVFAKVRRAIGLDRMRVMVTGSAPIAPHVLQFMRVLCACPIHEGYGQTETTAMTSLTFPGDWTT-GHVGGVAPVSEVRLVDVPEMGYLHTDRQHGGS---GRG 473
            +S  VP T T T G IRR  + +++P+L   G  T+YE FRR  A+ P  P +G R + + G A PY++ SY E   R++  A+ LE  +L   T D L +L LY+KNC EWILA+Q+ F + GATVPLYDTLGPD V +++ QTE  +VVC   E+E L     A+ K P     +++   ++      A + GL++ S   +E +G          H PP P D+ATF YTSGTTG PKGALLTH N ++      +  EV    DD H SYLPL H+FER ++  V   GA++ F++G P  L++D+QA RPT +PA PRVLN++YDK+  GV A+  +K  LF  A AAK   L ++  L   ++D+L+F+K+++ +G+D +RVM++GSAP++ +V+ F R +   P+ EGYGQTE  A  +++ P D +T GHVG      E+ L++VPEMGYLH+DR+H G    GRG
Sbjct:   24 WSTVVPQTSTETRGNIRRSYNPQVHPELGIKGARTLYESFRRGAALNPLGPCMGFRAVSTTGFATPYIYTSYSECVARINSFAAGLETLNLVKPTSDNLMVLCLYVKNCMEWILAEQSVFALGGATVPLYDTLGPDTVRFVLHQTEAQSVVCTRAEVEALCRVKDASDKVPVHFQTIIVIDGVTPEVADQAGRAGLEIISYAKVEAVGAHRIATQGHRHRPPQPGDIATFCYTSGTTGDPKGALLTHENMVSSMAGISQFPEVAIRTDDRHLSYLPLAHIFERTVISQVFLAGASVAFFRGDPTLLIEDLQACRPTLLPAAPRVLNKIYDKITTGVAAAGGMKSKLFNAALAAKTEGL-KKGHLHHALYDRLIFSKIKKGLGMDYLRVMISGSAPLSENVMTFFRCMLGIPVVEGYGQTEGAASGTISHPDDISTVGHVGCPVGSVEIVLMNVPEMGYLHSDREHRGQKCYGRG 496          
BLAST of NO30G00460 vs. NCBI_GenBank
Match: GAX22119.1 (long-chain acyl-CoA synthetase [Fistulifera solaris])

HSP 1 Score: 389.8 bits (1000), Expect = 1.400e-104
Identity = 206/474 (43.46%), Postives = 291/474 (61.39%), Query Frame = 0
Query:   11 YSVEVPNTETATSGPIRRFPDGEINPQLAYDGCYTIYELFRRSVAVYPHRPFLGHRPIDSEGNAAPYVFESYEEAARRVDHLASALEHEDLCPATPDGLRLLGLYMKNCPEWILADQAAFTIHGATVPLYDTLGPDAVGYIIQQTELSTVVCGPQELENLVA---AAPKCPSLKAAVLICPVLSDHHRALARKGGLKLYSLLDLEKLGFR----YPQPHLPPDPEDVATFSYTSGTTGGPKGALLTHRNFLTVYCA-GKALEVENFPDDIHFSYLPLPHVFERVMLLAVLGNGAAMGFWQGAPEKLVDDMQALRPTCMPAVPRVLNRMYDKVMAGVRASSPLKQALFQRAYAAKLRDLEERCELSKGVWDKLVFAKVRRAIGLDRMRVMVTGSAPIAPHVLQFMRVLCACPIHEGYGQTETTAMTSLTFPGDWTT-GHVGGVAPVSEVRLVDVPEMGYLHTDRQHGGS---GRG 473
            +S  VP T T T G IRR  +  ++P+L   G  T+YE FRR  A+ P  P +G R + + G A PY++ SY E   R++  A+ LE  +L   T D L +L LY+KNC EWILA+Q  F + GATVPLYDTLGPD V +++ QTE  +VVC   E+E L     A  K P     +++   ++      A + GL++ S   +E +G          H PP P D+ATF YTSGTTG PKGALLTH N ++      +  EV    DD H SYLPL H+FER ++  V   GA++ F++G P  L++D+QA RPT +PA PRVLN++YDK+  GV A+  +K  LF  A AAK   L ++  L   ++D+L+F+K+++ +G+D +RVM++GSAP++ +V+ F R +   P+ EGYGQTE  A  +++ P D +T GHVG      E+ L++VPEMGYLH+DR+H G    GRG
Sbjct:   18 WSTVVPQTSTETRGNIRRSFNPLVHPELGIKGARTLYESFRRGAALNPLGPCMGFRAVSTTGFATPYIYTSYSECVARINSFAAGLETLNLVKPTSDNLMVLCLYVKNCMEWILAEQGVFALGGATVPLYDTLGPDTVRFVLHQTEAQSVVCTRAEVEALCRVKDAGDKVPVHFQTIIVIDGVTPEVADQAGRAGLEIISYAKVEAVGAHRIATQGHRHCPPQPGDIATFCYTSGTTGDPKGALLTHENMVSSMAGISQFPEVAIRADDRHLSYLPLAHIFERTVISQVFLAGASVAFFRGDPTLLIEDLQACRPTLLPAAPRVLNKIYDKITTGVAAAGGVKSKLFNAALAAKTEGL-KKGHLHHALYDRLIFSKIKKGLGMDHLRVMISGSAPLSENVMTFFRCMLGIPVVEGYGQTEGAASGTISHPDDISTVGHVGCPVGSVEIVLMNVPEMGYLHSDREHRGQKCYGRG 490          
BLAST of NO30G00460 vs. NCBI_GenBank
Match: XP_002774616.1 (Long-chain-fatty-acid--CoA ligase, putative [Perkinsus marinus ATCC 50983] >EER06432.1 Long-chain-fatty-acid--CoA ligase, putative [Perkinsus marinus ATCC 50983])

HSP 1 Score: 385.2 bits (988), Expect = 3.300e-103
Identity = 207/483 (42.86%), Postives = 294/483 (60.87%), Query Frame = 0
Query:   11 YSVEVPNTE-TATSGPIRRFPDGEINPQLAYDGCYTI---YELFRRSVAVYPHRPFLGHRPIDSEGNAAPYVFESYEEAARRVDHLASALEHEDLCPATPDG-LRLLGLYMKNCPEWILADQAAFTIHGATVPLYDTLGPDAVGYIIQQTELSTVVCGPQELENLVAAAPKCPSLKAAVLICP-VLSDHHRALARKGGLKLYSLLDLEKLGFRYPQPHLPPDPEDVATFSYTSGTTGGPKGALLTHRNFLT------VYCAGKALEVE-NFPDDIHFSYLPLPHVFERVMLLAVLGNGAAMGFWQGAPEKLVDDMQALRPTCMPAVPRVLNRMYDKVMAGVRASSPLKQALFQRAYAAKLRDLEERCELSKGVWDKLVFAKVRRAIGLDRMRVMVTGSAPIAPHVLQFMRVLCACPIHEGYGQTETTAMTSLTFPGDWTTGHVGGVAPVSEVRLVDVPEMGYLHTDRQHGGSGRGAE-EGRGE 480
            Y+ EVP++     SGPI R  D         DG  ++   + +FR++   Y  +P  G RP   +G+  PY +++Y+E   R+ +    LEH +L   + DG +R++G+YMKN  EWI+A+Q AFT    TVPLYDTLG D V YI+ Q  L TVVC   ++  LVA   +CPSL   + + P   S+       + GLKL+S +D+E  G ++    L  DP D+ATF YTSGTTG PKGAL +H N +       V+   K   ++       + SYLPLPH+ ER++ ++++  G A+GF+QG P K+++D+ ALRPT   +VPR+LNR+YDK+  G RA+  +K  LF+ A AAK   LE+   L   +WDKLVF K++  IGLDR++++ +GSAP+A HV+ F+RV   C + EGYGQTE T + + + P D+TTGHVG      +++L DVPEMGYL TD QHG      E +GRGE
Sbjct:   13 YAYEVPDSAIPGKSGPIYRNVDAAEGNLSVIDGDESLDSSFAIFRKAAEKYADQPCHGTRPRLDDGSVGPYEWQTYKEVYDRILNFGRGLEHLNLLSKSGDGSMRVIGIYMKNRSEWIIAEQGAFTRRATTVPLYDTLGEDVVDYIVNQVVLETVVCTASQIPRLVACKAECPSLTNIICVDPEACSESVTTAMTEAGLKLHSFIDVENTGSKFDDEPLEGDPTDIATFCYTSGTTGDPKGALNSHGNIVANVSSFIVFLGTKTPIMDIRGSQQYYLSYLPLPHIMERLISISLVHLGVAVGFYQGEPLKIMEDIAALRPTIFVSVPRLLNRLYDKITLGARAAGGIKSYLFEHAMAAKKARLEQGI-LKHPLWDKLVFDKIKARIGLDRVQLVASGSAPLATHVMDFLRVFFGCAVAEGYGQTECTCLATYSHPHDFTTGHVGQPVCCMDIKLFDVPEMGYLSTDTQHGSGDAAIECKGRGE 494          
BLAST of NO30G00460 vs. NCBI_GenBank
Match: ANQ45195.1 (long-chain acyl-CoA synthetase [Phaeodactylum tricornutum])

HSP 1 Score: 378.3 bits (970), Expect = 4.100e-101
Identity = 206/482 (42.74%), Postives = 287/482 (59.54%), Query Frame = 0
Query:    7 RKKFYSVEVPNTETATSGPIRRFPDGEINPQLAYDGCYTIYELFRRSVAVYPHRPFLGHRPIDSEGNAAPYVFESYEEAARRVDHLASALEHEDLCPATPDGLRLLGLYMKNCPEWILADQAAFTIHGATVPLYDTLGPDAVGYIIQQTELSTVVCGPQELENLVAA--APKCPSLKAAVLICPVLSDHHRALARKGGLKLYSLLDLEKLG----FRYPQPHLPPDPEDVATFSYTSGTTGGPKGALLTHRNFLTVYCA--GKALEVENFPDDIHFSYLPLPHVFERVMLLAVLGNGAAMGFWQGAPEKLVDDMQALRPTCMPAVPRVLNRMYDKVMAGVRASSPLKQALFQRAYAAKLRDLEERCELSKGVWDKLVFAKVRRAIGLDRMRVMVTGSAPIAPHVLQFMRVLCACPIHEGYGQTETTAMTSLTFPGDW-TTGHVGGVAPVSEVRLVDVPEMGYLHTDRQHGGSGRGAEEGRGE 480
            ++   S  +P T+    G IRR  +  +N +L   GC T+YE FRR   V P  P +G R + + G A P+++ SY E   R+D  A+ L+   L     DGL +L LYMKNC E  + +  AF I G++V +YDTLGPD V +I+ QT   +VVC   EL  L  +  + KCP+  AA+L+  V  D  + +A + GL++ S   +E +G          H PP P DVA F YTSGTTG PKGALLTH N ++      G   ++E  P D H SYLPL H+FER++   +   GA++ F++G P  L++DMQA RPT MP  PRVLN++YDK+ AG+ +   LK+ LF  A AAK   L+    +   ++D+L+F K+++ +G+D++R+MV+GSAP+   V+ F R + A P+ EGYGQTE  A  ++    D  T GHVGG     E+ LVDVPEMGYLHTD  H G    A +GRGE
Sbjct:    3 KQNMRSTILPQTDRDDRGEIRRSWNPVVNAELGVYGCRTMYEGFRRGAKVNPLGPCMGFRAVSTTGFATPFIYSSYTECLARIDAFAAGLDTLKLIQPNEDGLAVLALYMKNCMEGAIGEHGAFAIGGSSVLMYDTLGPDTVTFILDQTSARSVVCTRAELPKLCESKVSGKCPAFTAAILVDGVTEDAAK-MALEAGLEVLSFAKVEAVGAVCIAEKGHHHRPPAPTDVAAFCYTSGTTGNPKGALLTHENIMSAIAGFYGAVGDLEAQPFDRHLSYLPLAHIFERIVSSQMFCAGASVAFFRGDPTLLIEDMQACRPTVMPVAPRVLNKIYDKIQAGISSVGGLKKKLFDAAVAAKAEGLQSG-HMKHALYDRLIFNKIKKGLGMDQLRMMVSGSAPLNDTVMTFFRCMLAIPVVEGYGQTEGAAAATIGSSDDMATVGHVGGPVGSVEIVLVDVPEMGYLHTDTLHRGM---ACQGRGE 479          
BLAST of NO30G00460 vs. NCBI_GenBank
Match: AGZ03886.1 (long-chain acyl-CoA synthetase 5 [Phaeodactylum tricornutum])

HSP 1 Score: 376.7 bits (966), Expect = 1.200e-100
Identity = 205/477 (42.98%), Postives = 284/477 (59.54%), Query Frame = 0
Query:   12 SVEVPNTETATSGPIRRFPDGEINPQLAYDGCYTIYELFRRSVAVYPHRPFLGHRPIDSEGNAAPYVFESYEEAARRVDHLASALEHEDLCPATPDGLRLLGLYMKNCPEWILADQAAFTIHGATVPLYDTLGPDAVGYIIQQTELSTVVCGPQELENLVAA--APKCPSLKAAVLICPVLSDHHRALARKGGLKLYSLLDLEKLG----FRYPQPHLPPDPEDVATFSYTSGTTGGPKGALLTHRNFLTVYCA--GKALEVENFPDDIHFSYLPLPHVFERVMLLAVLGNGAAMGFWQGAPEKLVDDMQALRPTCMPAVPRVLNRMYDKVMAGVRASSPLKQALFQRAYAAKLRDLEERCELSKGVWDKLVFAKVRRAIGLDRMRVMVTGSAPIAPHVLQFMRVLCACPIHEGYGQTETTAMTSLTFPGDW-TTGHVGGVAPVSEVRLVDVPEMGYLHTDRQHGGSGRGAEEGRGE 480
            S  +P T+    G IRR  +  +N +L   GC T+YE FRR   V P  P +G R + + G A P+++ SY E   R+D  A+ L+   L     DGL +L LYMKNC E  + +  AF I G++V +YDTLGPD V +I+ QT   +VVC   EL  L  +  + KCP+  AA+L+  V  D  + +A + GL++ S   +E +G          H PP P DVA F YTSGTTG PKGALLTH N ++      G   ++E  P D H SYLPL H+FER++   +   GA++ F++G P  L++DMQA RPT MP  PRVLN++YDK+ AG+ +   LK+ LF  A AAK   L+    +   ++D+L+F K+++ +G+D++R+MV+GSAP+   V+ F R + A P+ EGYGQTE  A  ++    D  T GHVGG     E+ LVDVPEMGY HTD  H G    A +GRGE
Sbjct:    8 STVLPQTDRHDRGEIRRSWNPVVNAELGVYGCRTMYEGFRRGAKVNPLGPCMGFRAVSTTGFATPFIYSSYTECLARIDAFAAGLDTLKLIQPNEDGLAVLALYMKNCMEGAIGEHGAFAIGGSSVLMYDTLGPDTVTFILDQTSARSVVCTRAELPKLCESKVSGKCPAFTAAILVDGVTEDAAK-MALEAGLEVLSFAKVEAVGAVCIAEKGHHHRPPAPTDVAAFCYTSGTTGNPKGALLTHENIMSAIAGFYGAVGDLEAQPFDRHLSYLPLAHIFERIVSSQMFCAGASVAFFRGDPTLLIEDMQACRPTVMPVAPRVLNKIYDKIQAGISSVGGLKKKLFDAAVAAKAEGLQSG-HMKHALYDRLIFNKIKKGLGMDQLRMMVSGSAPLNDTVMTFFRCMLAIPVVEGYGQTEGAAAATIGSSDDMATVGHVGGPVGSVEIVLVDVPEMGYFHTDTLHRGM---ACQGRGE 479          
BLAST of NO30G00460 vs. NCBI_GenBank
Match: XP_002177356.1 (precursor of ligase long chain acyl-coa ligase [Phaeodactylum tricornutum CCAP 1055/1] >EEC51819.1 precursor of ligase long chain acyl-coa ligase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 376.7 bits (966), Expect = 1.200e-100
Identity = 205/477 (42.98%), Postives = 284/477 (59.54%), Query Frame = 0
Query:   12 SVEVPNTETATSGPIRRFPDGEINPQLAYDGCYTIYELFRRSVAVYPHRPFLGHRPIDSEGNAAPYVFESYEEAARRVDHLASALEHEDLCPATPDGLRLLGLYMKNCPEWILADQAAFTIHGATVPLYDTLGPDAVGYIIQQTELSTVVCGPQELENLVAA--APKCPSLKAAVLICPVLSDHHRALARKGGLKLYSLLDLEKLG----FRYPQPHLPPDPEDVATFSYTSGTTGGPKGALLTHRNFLTVYCA--GKALEVENFPDDIHFSYLPLPHVFERVMLLAVLGNGAAMGFWQGAPEKLVDDMQALRPTCMPAVPRVLNRMYDKVMAGVRASSPLKQALFQRAYAAKLRDLEERCELSKGVWDKLVFAKVRRAIGLDRMRVMVTGSAPIAPHVLQFMRVLCACPIHEGYGQTETTAMTSLTFPGDW-TTGHVGGVAPVSEVRLVDVPEMGYLHTDRQHGGSGRGAEEGRGE 480
            S  +P T+    G IRR  +  +N +L   GC T+YE FRR   V P  P +G R + + G A P+++ SY E   R+D  A+ L+   L     DGL +L LYMKNC E  + +  AF I G++V +YDTLGPD V +I+ QT   +VVC   EL  L  +  + KCP+  AA+L+  V  D  + +A + GL++ S   +E +G          H PP P DVA F YTSGTTG PKGALLTH N ++      G   ++E  P D H SYLPL H+FER++   +   GA++ F++G P  L++DMQA RPT MP  PRVLN++YDK+ AG+ +   LK+ LF  A AAK   L+    +   ++D+L+F K+++ +G+D++R+MV+GSAP+   V+ F R + A P+ EGYGQTE  A  ++    D  T GHVGG     E+ LVDVPEMGY HTD  H G    A +GRGE
Sbjct:    8 STVLPQTDRHDRGEIRRSWNPVVNAELGVYGCRTMYEGFRRGAKVNPLGPCMGFRAVSTTGFATPFIYSSYTECLARIDAFAAGLDTLKLIQPNEDGLAVLALYMKNCMEGAIGEHGAFAIGGSSVLMYDTLGPDTVTFILDQTSARSVVCTRAELPKLCESKVSGKCPAFTAAILVDGVTEDAAK-MALEAGLEVLSFAKVEAVGAVCIAEKGHHHRPPAPTDVAAFCYTSGTTGNPKGALLTHENIMSAIAGFYGAVGDLEAQPFDRHLSYLPLAHIFERIVSSQMFCAGASVAFFRGDPTLLIEDMQACRPTVMPVAPRVLNKIYDKIQAGISSVGGLKKKLFDAAVAAKAEGLQSG-HMKHALYDRLIFNKIKKGLGMDQLRMMVSGSAPLNDTVMTFFRCMLAIPVVEGYGQTEGAAAATIGSSDDMATVGHVGGPVGSVEIVLVDVPEMGYFHTDTLHRGM---ACQGRGE 479          
The following BLAST results are available for this feature:
BLAST of NO30G00460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20588.15.600e-26893.43long-chain acyl- synthetase 7 [Nannochloropsis gad... [more]
CBN78354.14.800e-11051.65long chain acyl-coA synthetase [Ectocarpus silicul... [more]
XP_002293417.19.100e-10946.54Long-chain-fatty-acid--CoA ligase [Thalassiosira p... [more]
AAW58006.14.500e-10846.33long chain acyl-coA synthetase [Thalassiosira pseu... [more]
GAX14588.12.700e-10543.46long-chain acyl-CoA synthetase [Fistulifera solari... [more]
GAX22119.11.400e-10443.46long-chain acyl-CoA synthetase [Fistulifera solari... [more]
XP_002774616.13.300e-10342.86Long-chain-fatty-acid--CoA ligase, putative [Perki... [more]
ANQ45195.14.100e-10142.74long-chain acyl-CoA synthetase [Phaeodactylum tric... [more]
AGZ03886.11.200e-10042.98long-chain acyl-CoA synthetase 5 [Phaeodactylum tr... [more]
XP_002177356.11.200e-10042.98precursor of ligase long chain acyl-coa ligase [Ph... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR051ncniR051Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR102ngnoR102Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO30G00460.1NO30G00460.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|633385gene_9274Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100649g1gene9821Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO30G00460.1NO30G00460.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO30G00460 ID=NO30G00460|Name=NO30G00460|organism=Nannochloropsis oceanica|type=gene|length=3575bp
GTTGTGATGCCCACACCACCACACGACGCATGTTCCTTTTCATTCCAAAC
CCCAAGTCCTGTCATAGAGCAGCTGTGTTATGCAACCCTTGCATCCAACC
AGGAGAACCATGACTCGACTGTGTCTAGTACAAATCATTTCGTTCATTGA
AAGGCAAAATTGTGCCCTCTTATATATGCAAGAACGAACAAGAAAGATAA
TCGAGTTGCAGTAGGCTTTGCCTGTCCTTGGTCCGGTTCACGTGCCTCCA
TCCGCGCCCCTTTTCACACCCAGGAATCAGGGATGTGGAGCAGCGGTACG
CTAGGCTGATCTGGAACATGGCAGAATCGAGGCTTGGTGGTCGAGCCGGG
TTTGAAGACATCCTTGTGACCCTAGTTGGACAGCTGTCTCCTTTCATTTG
TTTGTGCTTACATGCCTATTCCACCTATCCGCAATCACGCCAAACAGGGG
CCCAATAGCGCTGTTTGAGCTTGAAGACCCCGTCAACTAGCCAAATAGAG
GAAGTTTTTATTTTCCAAGGGGCCAAAGTCACTCTCGCCCACCCTATTTC
TCCATCTCGAGCTCGACACCTCTCCCACTTTTTCCCACAACCACTTCACT
CTGCAGACATGGTGTATGTTCCGCACCGCAAAAAGTTCTACTCGGTGGAG
GTGCCTAACACGGAGACGGCCACCAGCGGGCCTATTCGGCGCTTCCCAGA
TGGGGAGATCAATCCCCAGCTGGCCTACGATGGCTGCTACACCATATACG
AGCTCTTCCGCCGTTCCGTGGCTGTGTACCCGCACCGGCCCTTCCTCGGG
CATAGGCCAATCGATTCCGAGGGCAACGCAGCACCATACGTGTTCGAGTC
CTATGAGGAGGCAGCCCGGCGCGTCGACCACCTGGCCTCGGCGCTGGAAC
ACGAGGACCTGTGCCCGGCCACGCCTGACGGGCTGCGACTGCTCGGGTTG
TACATGAAGAATTGCCCCGAGTGGATCCTCGCGGACCAGGCGGCCTTCAC
CATCCACGGCGCAACAGTGCCGCTGTATGATACGCTGGGCCCGGACGCGG
TGGGCTACATCATCCAGCAGACGGAGCTATCCACGGTGGTGTGCGGCCCG
CAGGAGCTGGAGAACCTGGTGGCGGCCGCGCCAAAGTGCCCCTCGCTTAA
GGCGGCCGTGCTCATCTGCCCCGTGCTGTCAGACCATCACCGGGCCCTGG
CGCGCAAGGGCGGCCTCAAGCTTTATTCCCTCCTGGATTTAGAGAAATTA
GGATTCCGCTACCCGCAGCCGCACCTGCCACCCGACCCGGAGGACGTGGC
CACCTTTTCCTACACGAGCGGCACCACGGGCGGGCCCAAGGGCGCCCTGC
TCACGCACCGCAATTTTTTGACTGTGTACTGCGCAGGCAAGGCGCTGGAG
GTGGAAAACTTTCCCGATGACATCCACTTCTCGTACCTGCCGCTGCCCCA
CGTCTTTGAGCGCGTGATGCTGCTGGCTGTGCTCGGGAACGGCGCGGCCA
TGGGCTTCTGGCAGGGCGCGCCCGAGAAGTTGGTGGACGATATGCAGGCG
TTACGGCCCACCTGCATGCCGGCCGTGCCGCGCGTGTTGAACCGCATGTA
CGACAAGGTCATGGCGGGTGTGCGGGCCTCGTCGCCGCTGAAGCAGGCCC
TCTTCCAGCGCGCATATGCGGCCAAGCTCCGGGACCTGGAGGAGCGCTGT
GAGCTGAGCAAAGGCGTGTGGGACAAGCTGGTGTTTGCCAAGGTGCGGCG
AGCCATCGGGTTGGATCGGATGCGCGTGATGGTGACGGGCTCAGCACCCA
TCGCACCGCACGTGCTGCAGTTCATGCGCGTGCTGTGTGCCTGTCCCATC
CACGAGGGCTACGGCCAGACGGAGACCACGGCCATGACCTCGCTCACATT
CCCCGGCGATTGGACCACCGGTCACGTGGGCGGCGTAGCGCCTGTCTCGG
AGGTGCGCCTGGTGGACGTGCCGGAGATGGGCTACTTGCACACGGACCGC
CAGCACGGGGGGAGCGGTCGAGGGGCGGAGGAGGGGCGGGGGGAGCCGCG
GGCAAGCCGGCGCAACCTTGCATCGGCCGCGGCGAGATCTGCGTACGCGG
GCCGCATGTGTTCAAGGGATACTACAAGCAGCCGGACAAGACGGCCGAGG
CGGTTGACGCGGCGGGCTGGCTGCATTCGGGCGACGTGGGCATGTGGACC
CCCGAGGGCCGGCTGGTGATCATCGACCGGAAGAAGAACATCTTTAAGCT
GGCACAGGGCGAGTACGTGGCGGCCGAGAAGATTGAGAATGTGCTCATGC
AGTCCGAGATGGTGGCGCAGGCCTTCGTCTACGGGGACTCCCTCAAGAGC
GAGCTGGTGGCCATCGTCGTCCCGGACGCCGAGGCCGTGCACGATTGGGC
CCGCGCCGAGGGCCTGCCCGCCGATCTGACCTTCCCCGAGCTCTGCCGCC
AGCCCCTGCTCAAGgtacgtaaggaaagagagaggcagagagtgacggag
aggtgctgtgaaagtctgtgtgttggagaatgtgggggtgggtgagtgcg
ggggtaatgagtttggtggtgtagtgaccgccgcgcatccctcgcccctt
catatctgtcaatgtttacatcgctgtccctgtttaagcgctttttacgc
tccatagtatagagtctccattcgtacagcatctctcataccccttccat
taagcccagccataccaccatgcaccctcacatgctccttctcctcctca
tccccctcctcctccccatccactcccacttcccaccctatggcagGAAA
CCATCCTGGGCGAGATCGAGCTACAGAGCAAGCGGGCGGGCCTGCATGGG
TTTGAGATCCCCAAGGCGGTATACTTGGAGTCGGAGGCCTTCACGGGCGC
CAACGACCTCCTCACCCCAACTCAGAAGCTGAAGCGTATGCAGGCTCGCG
ACCGGTACGCCGCCATCATCCAGGAGCTCTATGCAAAGCGGGAAAAATCC
CAACAGTCGCGGCTCTAGGAAGAAAAACAGGGTGGAGGGACGGGGGCAGA
AAGTGGTCTTCGTTGTTGCTGAGAAGGAGGAGTGGGTGGAGAGAAGGAAG
GTTTTACCAAGTTTAATTTGGGCTGAGGCGAGTTTTCTCGCTGAATTTTG
TAGGATAAAGGGCTAATGAGGGGCAAGAGAGGGCAGATTGGATAAAACCT
AAAATGTGGCTTGGACCCGGAAGGGCAGGTGAAAGAAGCCAAAGTGGCTT
TATTTGTATAATGGCCTGCACTGGCAGTGAGGCCGAGAGACAGAGGTAAA
GAGCATCTGATGGTGGTAGGAAGGACCAGGAGACGGGATGGAGGGAAGAA
AGAGCAAACATCTGAATATAATGCCTTGTTGGGCGGAAGAGACAGGGTTC
TGGTGGGGGATAATTAAAGGAAGAGACTGTGCTGTATTTGAATGGAGGGA
CAGACTTTGACGCACAGACCCACTGCATGTCTAGGAAAAAGAGCACCTTC
AAAGAAAGAGGATAAAAGGAAATAACACAATTGAAAGAAATGCTTGGAAA
GATTTCGTCGCCTTGACATCAGCGA
back to top

protein sequence of NO30G00460.1

>NO30G00460.1-protein ID=NO30G00460.1-protein|Name=NO30G00460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=537bp
MVYVPHRKKFYSVEVPNTETATSGPIRRFPDGEINPQLAYDGCYTIYELF
RRSVAVYPHRPFLGHRPIDSEGNAAPYVFESYEEAARRVDHLASALEHED
LCPATPDGLRLLGLYMKNCPEWILADQAAFTIHGATVPLYDTLGPDAVGY
IIQQTELSTVVCGPQELENLVAAAPKCPSLKAAVLICPVLSDHHRALARK
GGLKLYSLLDLEKLGFRYPQPHLPPDPEDVATFSYTSGTTGGPKGALLTH
RNFLTVYCAGKALEVENFPDDIHFSYLPLPHVFERVMLLAVLGNGAAMGF
WQGAPEKLVDDMQALRPTCMPAVPRVLNRMYDKVMAGVRASSPLKQALFQ
RAYAAKLRDLEERCELSKGVWDKLVFAKVRRAIGLDRMRVMVTGSAPIAP
HVLQFMRVLCACPIHEGYGQTETTAMTSLTFPGDWTTGHVGGVAPVSEVR
LVDVPEMGYLHTDRQHGGSGRGAEEGRGEPRASRRNLASAAARSAYAGRM
CSRDTTSSRTRRPRRLTRRAGCIRATWACGPPRAGW*
back to top
Synonyms
Publications