NO30G00440, NO30G00440 (gene) Nannochloropsis oceanica

Overview
NameNO30G00440
Unique NameNO30G00440
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2165
Alignment locationchr30:182253..184417 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr30genomechr30:182253..184417 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO30G00440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR051ncniR051Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR102ngnoR102Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO30G00440.1NO30G00440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO30G00440.1NO30G00440.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO30G00440 ID=NO30G00440|Name=NO30G00440|organism=Nannochloropsis oceanica|type=gene|length=2165bp
GGTCTCAGTGAGTCTCTGTGGTCCTCGGTGAGTCTCTTATGGCCTTTTAC
CAGTCCCTTGATGCGATTGTGTGTTTATCATGAGTTTACGATCCTGAGCA
AGCCGGCTTTGGAGCTGTTCTTTCTTCCGAACGGCGGGAGGAGAGGCACA
TGCATACCTGACTTCCGCATGGAGGAGGGCAAACTGTCTACAGGACAATT
CCTTGCGTTGCCCAGTCGCGTGGAGACATCGCATACCCCTTTTACAAATG
TCTGTGGGCTTGGTTGCTGCAAAGGCTGCTTGGCCAAGTTTATCGCATCT
GCTGACGCGCGTCTTCCGGGCCTTTGGCTTTTTCTTCTTGGATGCTTCCA
TCACTGTCAGTATCACAGCCAGAGCTCGCACATGTACTCACGACTCACAT
TCACTTTTTCACCCTGACCTTGTATAGGTGTCTGCAGAGTGCTTTGTCTC
ATCCTCTGCCTTGTTTGTGCCTGGTCTCATCGGTCACAGGCAAAGTTTTT
CCTTGAGTGCAGCTCTGCTGCCCCAGACTTCAATACCCCCAACCCAGCCA
TAGCCAATATCAGGTGCCTCTAGGAGGGCCAGAACTACCCCACGCCCGGC
AATCCTGCCATAATACTACGCCCCTAAACTGCTCACATACAATCGAGTGC
CTTAGGTAGCTTCGACCGGCGTCAAAAATGCGCCGGTCCTTGCCGGAAGG
CGTAGAAGACGTGCAAGATGCCGCTGCCTCCTCCTCGGATCCTGATGCAG
CCGCCCGTGGGGTGGTGCCGGTGAACAACGTGACGCTCATGATCTCAAGA
CGGGCTGGACGCTTGAACTCGTTGTCAGACGATGAAGACGATGACAATGA
GGACCAGTTGACGCTGGAGGAGGAGCAAGCCACGGCGGCAGCAGCAGCAG
CAGCAGCAACAGGAGGAGGACCAACAGCAGCAACAGCAGCAGCAGCTGGA
GTCAGGACAGCGGTGGAAGGATCTAATGAGAGGGTAGAAAGTAGCGTGGA
TCCAACCAATAGCAGCAGGAGTGCAACCTCGCCAGGAACCTCATCGTCCT
CATCACCCTGGCCCGCACCTTCCTCATCACCGGCGGCGGGAGGGGGGCAA
GACGGGTTGTTAAGTTTGTTTGGACAGGTCTTACGGAGGCCTCTCTGGAC
TGCCCCCACTTCAGCGTTTGCAGTACCTCCTCCGGGTGCTGCTGCATTTA
GGGAGGAAGCCAAAGAGGACGAGCACGAGGGCATGGTGATCATCCCGCTG
GGGGGATCTGCTACCGCGTCAGCGGTGGCAACAACGGCGGCAGCAGCTGC
AGCAGAAGGAGTGTCAACGACGGCTGATGCGGCATCAGGGGAAGGAAGGC
GGCATTTGTTTGCGTGGATATGTTCTCAATGCCTCCGTCCAGGTGGACCC
GGGGCTTGGAGGAGCGCGCACTCAGCCGCCGCTGCGACTGGCGCAGGCGG
TGCTGCCTCCAGGCTGCCCCACCGCGGGGGCGAGGACGAGGATGAGGACG
AGGACGAGGCGGCAGACACCGACACAGGCGCCTCCCCGCACCCAGTCGCT
CCCCCCTCCTCTTCCTCCTCCTCGACCTCCTACTCCCCATCGGTCCTGGC
GGCCGCCTGCGCCACGGCCGTCCGCCGGCATCACCTCCTCATCCTCTGGT
CGTTTGGAGGCCTGATGCTCCTGCGAATGGCCCTGGTGGCGTTCCAACGC
CGCGACAGCAAGCTACTCGTATTCACCTCCCTGGTCCTGGCCCTGGCCGT
CTACATCTGGTGGACCAGGAGGGTCAGGCAAGCCCGCCTGGAGGCCCTGC
GCGAGGCGGCGATGCACAGCGAGCACGTGGCCATGATGCAGCACATCGCC
AGCGCCAGGGAGGGGGGGAGGGGGGGAAGGAGGGGGGGCTTGGAGTCGGT
CGACTTGGAGGAGTTGCAGAGCATCATGTTGGAGGCGCGGAGGCAAGGGG
AGCTCCAGGGAGGGCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGTGGG
CTGTCGCCTCACAGTAAGGCCGCCCTGGTCAGATTTTCATTTCGATCCAA
CTCCAGCTCCAGTGGCTACTTCGGGGCGGAGGGAGGTCGGGGAGGAGAGG
AGGAGGAAGCAGAGGGGGAAGGGAAGGAAAGTGGATGGCAGGGGGGGGGA
GCGGTGTGTCCCTAG
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protein sequence of NO30G00440.1

>NO30G00440.1-protein ID=NO30G00440.1-protein|Name=NO30G00440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=496bp
MRRSLPEGVEDVQDAAASSSDPDAAARGVVPVNNVTLMISRRAGRLNSLS
DDEDDDNEDQLTLEEEQATAAAAAAAATGGGPTAATAAAAGVRTAVEGSN
ERVESSVDPTNSSRSATSPGTSSSSSPWPAPSSSPAAGGGQDGLLSLFGQ
VLRRPLWTAPTSAFAVPPPGAAAFREEAKEDEHEGMVIIPLGGSATASAV
ATTAAAAAAEGVSTTADAASGEGRRHLFAWICSQCLRPGGPGAWRSAHSA
AAATGAGGAASRLPHRGGEDEDEDEDEAADTDTGASPHPVAPPSSSSSST
SYSPSVLAAACATAVRRHHLLILWSFGGLMLLRMALVAFQRRDSKLLVFT
SLVLALAVYIWWTRRVRQARLEALREAAMHSEHVAMMQHIASAREGGRGG
RRGGLESVDLEELQSIMLEARRQGELQGGLQQQQQQQQQRGLSPHSKAAL
VRFSFRSNSSSSGYFGAEGGRGGEEEEAEGEGKESGWQGGGAVCP*
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Synonyms
Publications