NO30G00400, NO30G00400 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO30G00400 vs. NCBI_GenBank
Match: EWM20126.1 (hypothetical protein Naga_101689g2, partial [Nannochloropsis gaditana]) HSP 1 Score: 180.3 bits (456), Expect = 8.600e-42 Identity = 90/128 (70.31%), Postives = 103/128 (80.47%), Query Frame = 0 Query: 1 MPRFHALLLLLLSVLSLLALTHGQASFAEDIFADEDEVPILGYDTAGNPIKPEVKREINTQVHTTNPDLGKRAQKVDLPFIACDVCTLVMTELHNQTAVLATKAENLVNGKPKKSVMLKLTKRVCDHA 129 MPR A LLL++ LSLL+ GQASFAEDI+ EDE+P LGYDTAGNPIKPE KRE+NTQVHTTNPDLGKRAQK DLP+IACDVC L M +L N T LA + ENL GKPKKS++LK TK+VCD+A Sbjct: 1 MPRLQAFFLLLVASLSLLSHVRGQASFAEDIWESEDEIPPLGYDTAGNPIKPETKRELNTQVHTTNPDLGKRAQKTDLPYIACDVCMLTMEQLSNVTRNLALREENLHKGKPKKSLVLKATKKVCDYA 128
BLAST of NO30G00400 vs. NCBI_GenBank
Match: XP_015775852.1 (PREDICTED: uncharacterized protein LOC107353970 [Acropora digitifera]) HSP 1 Score: 74.7 bits (182), Expect = 5.100e-10 Identity = 48/173 (27.75%), Postives = 85/173 (49.13%), Query Frame = 0 Query: 73 AQKVDLPFIACDVCTLVMTELHNQTAVLATKAENLVNGKPKKSVMLKLTKRVCDHATFEGRWISYYDIQEKERVGGIALKLVKQPESGMCEVEAETIAKSCSDLFKKDHVERDEVVDDLVEQVISKSGLVTKYCKDISSRCSKNTQSLMEKGKRRDHKFHVKTKEAKSYDRIM 246 A K DLP+I C+ C + L+ +T + +N + ++ L ++ C EG WIS +D+ EK L+L +Q + G C+ E +TI+K+C + + E+ L + +S S L+ + C +SS C + L ++ D KF++ T++ K D I+ Sbjct: 45 AVKEDLPYIKCETCQKAVKHLYGKTQEMRGGGTKKLN----EDKIIDLVEKSCSPEKEEGSWISKFDLIEKNG----ELRLSEQKDVGKCQRECQTISKACEESVADVDTDLAEL---LWKNKLSLSKLINEVCYSMSSVCKEKRPKLKPGERKDDEKFNILTEDEKKADEIL 206
BLAST of NO30G00400 vs. NCBI_GenBank
Match: CBN80275.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 72.0 bits (175), Expect = 3.300e-9 Identity = 60/168 (35.71%), Postives = 85/168 (50.60%), Query Frame = 0 Query: 75 KVDLPFIACDVCTLVMTELHNQTAVLATKAENLVNGKPKKSVMLKLTKRVCDHATFEGRWISYYDIQEKERVGGIALKLVKQPESGMCEVEAETIAKSCSDLFKKDHVERDEVVDDLVEQVISKSGLVTKYCKDISSRCSKNTQSLMEKGKRRDHKFHVKTKEAKSYD 243 K DL I C VC + L+ + A + A GK + + + + CD AT EGRWI+ YDI E+ G L+L KQ C+ E ETIAKSC+ L D ++ +EVV L + + S L C + S RCS + K R+D++F KT AK ++ Sbjct: 32 KGDLAAIKCGVCQGLAEHLYEKVAEMREAAP---FGKVHEDDISTVIEGACDPATKEGRWITEYDIVEE----GGYLELKKQDSFSHCKEECETIAKSCTVLV-DDELDVEEVVVALWKNKLGLSELQKAACGEWSDRCSGKKRVKAPK-DRQDYEFEPKT--AKDFE 188
BLAST of NO30G00400 vs. NCBI_GenBank
Match: GAX82084.1 (hypothetical protein CEUSTIGMA_g9512.t1 [Chlamydomonas eustigma]) HSP 1 Score: 70.5 bits (171), Expect = 9.600e-9 Identity = 53/186 (28.49%), Postives = 89/186 (47.85%), Query Frame = 0 Query: 73 AQKVDLPFIACDVCTLVMTELHNQTAVLATKAENLVNGKPKKSVMLKLTKRVCDHATFEGRWISYYDIQEKERVGGIALKLVKQPESGMCEVEAETIAKSCSDLFKKDHVERDEVVDDLVEQV---ISKSGLVTKYCKDISSRCSKNTQSLMEKGKRRDHKFHVKTKEAKSYDRIMDAFAEAGVLG 256 A K DL +I C C + + +V K+E K ++S +L + + +CD T G WI+ D+QE G L+LV+ P+SG C E TIA++CSD+ + D + +L E + S+ CK+++S C + L K + +F T++ S + M ++G+ G Sbjct: 58 AVKTDLKYIICGTCEGIAKQA--VLSVKRNKSEETPIKKYRESDVLDMLEEICDPDTAAGEWITNIDLQET----GDRLQLVEMPQSGKCRRECRTIARACSDIME------DADITELSEGLWHGFSRGDTSKLLCKELTSSCKRKIPPL-PKDRPVGEEFQPLTEDELSMRQTMRGMKKSGMSG 230
BLAST of NO30G00400 vs. NCBI_GenBank
Match: XP_004287526.1 (PREDICTED: uncharacterized protein LOC101311604 [Fragaria vesca subsp. vesca]) HSP 1 Score: 68.9 bits (167), Expect = 2.800e-8 Identity = 43/142 (30.28%), Postives = 70/142 (49.30%), Query Frame = 0 Query: 73 AQKVDLPFIACDVCTLVMTELHNQTAVLATKAENLVNGKPKKSVMLKLTKRVCDHATFEGRWISYYDIQEKERVGGIALKLVKQPESGMCEVEAETIAKSCSDLFKKDHVERDEVVDDLVEQVISKSGLVTKYCKDISSRCS 215 A+K D+PFI C VC + +LH+Q + K + K + ++++T+ VC+ E WI DI E+ G L+LV+Q G C E +TI ++C ++ +V + L + V CKD+S+ CS Sbjct: 34 ARKEDIPFIKCQVCEKLAAQLHHQ---VEKKRAEIQPKKISEYQIIEITENVCNLKKAEADWILLIDIVEQ----GDKLQLVEQESEGQCNSECKTIERACQEVLGYSDT---DVAEYLYKSKPDIGSFVNYLCKDLSTACS 165
BLAST of NO30G00400 vs. NCBI_GenBank
Match: XP_009802306.1 (PREDICTED: uncharacterized protein LOC104247871 [Nicotiana sylvestris]) HSP 1 Score: 68.9 bits (167), Expect = 2.800e-8 Identity = 45/143 (31.47%), Postives = 74/143 (51.75%), Query Frame = 0 Query: 73 AQKVDLPFIACDVCTLVMTELHNQTAVLATKAENLVNGKPKKSVMLKLTKRVCDHATFEGRWISYYDIQEKERVGGIALKLVKQPESGMCEVEAETIAKSCSDLFKKDHVERDEVVDDLVEQVISKSGLVTKYCKDISSRCSK 216 A+K D+P+I C VC + +L+NQ + K + K + ++++++ VC+ E WI DI E+ G L+LV+Q G C E +TI ++C D+ D+ + D V + L + L + CKD+S CSK Sbjct: 32 ARKEDIPYIKCQVCEKLAYQLYNQ---VQNKRAEISPKKISEYQIIEISENVCNLKKQEADWILKIDIVEQ----GDRLELVEQDSEGQCNSECKTIERACQDVM--DYSDTD-VAEYLYKHNPDLDSLKSFLCKDLSKSCSK 164
BLAST of NO30G00400 vs. NCBI_GenBank
Match: XP_016472040.1 (PREDICTED: uncharacterized protein LOC107794096 [Nicotiana tabacum]) HSP 1 Score: 68.9 bits (167), Expect = 2.800e-8 Identity = 45/143 (31.47%), Postives = 74/143 (51.75%), Query Frame = 0 Query: 73 AQKVDLPFIACDVCTLVMTELHNQTAVLATKAENLVNGKPKKSVMLKLTKRVCDHATFEGRWISYYDIQEKERVGGIALKLVKQPESGMCEVEAETIAKSCSDLFKKDHVERDEVVDDLVEQVISKSGLVTKYCKDISSRCSK 216 A+K D+P+I C VC + +L+NQ + K + K + ++++++ VC+ E WI DI E+ G L+LV+Q G C E +TI ++C D+ D+ + D V + L + L + CKD+S CSK Sbjct: 32 ARKEDIPYIKCQVCEKLAYQLYNQ---VQNKRAEISPKKISEYQIIEISENVCNLKKQEADWILKIDIVEQ----GDRLELVEQDSEGQCNSECKTIERACQDVM--DYSDTD-VAEYLYKHNPDLDSLKSFLCKDLSKSCSK 164
BLAST of NO30G00400 vs. NCBI_GenBank
Match: XP_002170798.2 (PREDICTED: uncharacterized protein LOC100207705 [Hydra vulgaris]) HSP 1 Score: 68.2 bits (165), Expect = 4.800e-8 Identity = 52/181 (28.73%), Postives = 86/181 (47.51%), Query Frame = 0 Query: 77 DLPFIACDVCTLVMTELHNQTAVLATKAENLVNGKP-KKSVMLKLTKRVCDHATFEGRWISYYDIQEKERVGGIALKLVKQPESGMCEVEAETIAKSCSDLFKKDHVERDEVVDDLVEQVISKSGLVTKYCKDISSRCSKNTQSLMEKGKRRDHKF-HVKTKEAKSYDRIMDAFAEAGVLG 256 DLPFI CDVC VL EN + K + +L + ++ CD G WIS DI EKE LK+V+ P+ G C+ E +TI++SC D+ + E+ L + + + + C +++ C + + KG +D+KF + KE ++ D + + + G+ G Sbjct: 34 DLPFIKCDVC-------QKAAKVLFKTIENQRSEKKLDEDDVLSIVEKSCDTDVLYGDWISRLDIVEKEN----DLKVVEHPQEGKCDRECKTISRSCEDIIGDIDTDIGEL---LWKNEMKLATFINHVCYKLTNSCKAKKKYV--KGSHKDYKFVEMSEKEKQARDLMRNMKSVPGMPG 198
BLAST of NO30G00400 vs. NCBI_GenBank
Match: XP_008352365.1 (PREDICTED: uncharacterized protein LOC103415863 [Malus domestica]) HSP 1 Score: 68.2 bits (165), Expect = 4.800e-8 Identity = 49/173 (28.32%), Postives = 79/173 (45.66%), Query Frame = 0 Query: 73 AQKVDLPFIACDVCTLVMTELHNQTAVLATKAENLVNGKPKKSVMLKLTKRVCDHATFEGRWISYYDIQEKERVGGIALKLVKQPESGMCEVEAETIAKSCSDLFKKDHVERDEVVDDLVEQVISKSGLVTKYCKDISSRCSKNTQSLMEKGKRRDHKFHVKTKEAKSYDRIM 246 A+K D+PFI C VC + ++LH Q + K + K + ++++++ VC+ E WI DI EK G L+LV Q G C E +TI ++C ++ +V + L LV CKD + CS + K + F K+++ +RIM Sbjct: 34 ARKEDIPFIKCQVCEKLASQLHQQ---VEKKRAEIAPKKISEYQIIEISENVCNLKKQEADWILQIDIVEK----GDKLELVDQGSEGQCNSECKTIERACQEVLGYSDT---DVAEYLYTSKPDXGSLVNYLCKDFTKACSTKPPP-VPKNRIPGEAFVAKSEKEAEMERIM 195
BLAST of NO30G00400 vs. NCBI_GenBank
Match: XP_019436205.1 (PREDICTED: nucleophosmin-like [Lupinus angustifolius]) HSP 1 Score: 68.2 bits (165), Expect = 4.800e-8 Identity = 44/153 (28.76%), Postives = 75/153 (49.02%), Query Frame = 0 Query: 63 HTTNPDLGKRAQKVDLPFIACDVCTLVMTELHNQTAVLATKAENLVNGKPKKSVMLKLTKRVCDHATFEGRWISYYDIQEKERVGGIALKLVKQPESGMCEVEAETIAKSCSDLFKKDHVERDEVVDDLVEQVISKSGLVTKYCKDISSRCSK 216 H++ +G A+K D+P+I C VC + ELH+Q + K + K + ++++ + +C+ E WI DI EKE L+LV+Q G C E +TI ++C ++ +V + L + L+ CKD++ CSK Sbjct: 19 HSSKKPVGV-ARKEDVPYIKCQVCEKLAKELHHQ---VYNKQVQISPKKISEYQIIEMAENICNLKKAEADWILRIDIVEKED----RLELVEQDSEGQCNSECKTIERACQEVMGYSDT---DVAEYLYKSKPDVDSLLNYLCKDLTKACSK 160 The following BLAST results are available for this feature:
BLAST of NO30G00400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO30G00400 ID=NO30G00400|Name=NO30G00400|organism=Nannochloropsis oceanica|type=gene|length=3437bpback to top protein sequence of NO30G00400.1 >NO30G00400.1-protein ID=NO30G00400.1-protein|Name=NO30G00400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=283bpback to top Synonyms
Publications
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