NO29G01760, NO29G01760 (gene) Nannochloropsis oceanica

Overview
NameNO29G01760
Unique NameNO29G01760
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4611
Alignment locationchr29:556245..560855 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:556245..560855 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO29G01760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR097ncniR097Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G01760.1NO29G01760.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G01760.1NO29G01760.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G01760 ID=NO29G01760|Name=NO29G01760|organism=Nannochloropsis oceanica|type=gene|length=4611bp
ATGCGACCTCAAAAGCCGCCGGGCGGGCCCTCCGCCACCAAACAGgtaaa
gcacgcacaagttaatcatcactgccgttttctctccgcccgctcaccca
ctctctcatcccttctccatttcccttcgcgttatcacagGCTGCCGCTG
TCGCGGTTGCTGCTGCCGTCTCGGCAGCCACCATCGCCACGGCTGCAGGC
CAGGCCGATGCAAAGgtaaatatatgtgtacacgtgcaaatgtataatta
tgtatacatttttcattcttctttcctccatcccttcctccattacgctc
acaaaactaccactagGCGGCTTGGGCGGCGCGGGATTTCAGCACAGCCA
GGCTCTCGATTGAGATGTTGAGCCGGCACCGCGAGgtgagggagggaggc
acagagggagggaaggacggagggagggacggaggccttctcctttggcc
cagttctagttcctgtctgcctgtcgggcgaagcatgagctgccccctgc
ccctcctccccttctcccctccctccctccctcctcctcttcctcctctt
cctccccagGTGGAGGGCTCGACGCTTTCCTTCTGCCACGGCGAGACCCC
GCGCCTGCTCCTCTTTATCCATCGCCCCCACGGCAGCATCAGGAGCAAGG
AGGAATTTCAGgtaagtgagggagggaaggagggacggaggcaggggagg
gagaggcaggagtagattacactgacccatttctctcatcgaccttcctt
ccctccctccctccctccctccctccctccctccctccctccctccctca
ctccttcttctctccctagCGCGACTGGTTTCGTTTCGCCGCCGACCTCC
GCGTCGAAGCTCGGCTCTACGACGAGGAGGGAGAGAGGGACGGAGCGAGG
GAGCGAGGCAGGCACCGACGTCTCGTGTTGATTAAGGGCTGCGTCTTGTC
GCCCTGTGCGGGAGACGCGTCGTCTGCTGgtaaattacctccctctttcc
ctccttttctctccccccttttccctcccttctttcctccctccctccct
cccttctttcctccctccttccctccttttctccgtcctttcctcatcct
tttcctccttcccttcttcctctctctttctttctctttaccccccccct
ctctctctctctacccctctttctctatatcttttttatcatctccctct
tcttcctctctctgacccccctccctccctccctccctccctccctccct
ccctccctccctccctccctccagCCCTCCCCCTCACAGACGCCGAGCGT
GCACGCGTGGCCGCCGCCGGGGCCGAAATTTGCTACCTCGTCGAGACCGA
GATGGAGgtatttccttccctccctccctccctcccttcctcctcccatc
ctgaaatctgctgatcatcggctcgagacagacgccttgggcccgcgccc
tcctccttccctccactgcgcataaagtagttcttccccctccctcccct
actccctttctccctcctcccctccctccctagGTCAAGCTACGGCAGCT
TGACCGACGCCTCGCCCTGACTCTCGTCCTCGCCTTGCCCGAATGGACGG
GAGGAGCGTCCGGCGACAGgtagggagggagggagggagggagggaggga
gggagggagggagggagggagatcagccgcgctcctcattcacccccccc
ccaacacctcttccatttcggcaccctccctccctccctccctccctccc
tccctccttccctcctttcctcagCGCTCCTCCTCTTCCTCCTCCTCCTT
CTCCTCCTTTTTCGGCCGCTGTGGCGGACATCCGATCCTCCCTCCTCCAC
CTCACCCTCGCTCCTACCTACTCCACGCCCTCCCGCGTCCTCTCTTTCCC
AATCAAGgtacaggcccttcctccctccctccctccctccctccctccct
tcctccctccctccctcccttcctccctccctccctccctccgacctccc
gtatcaccccccctccctccctccctccctccccccctcccttccctcag
ATCATCGAGCCCCTCCTCCTGACGTCCTCCTACGCCTCTCACCAGGACGG
GAGCTATATTAACGTCCAGATTGAAAACAGACACCCTTCCCAAgtacgcc
ctccctccctccctcccccctccctccctccctccctccctccctccctc
cctccctccctccctccctccctccctccctccctccctccctccctcca
tcaccttcgcattctattctgctctcgtcatgtttcttcctttcccttcc
ttccttcctccctccctccctccctccctccagGCGCTTCTTATTCAGGA
CGTCGGCTTCCACCTCGACCACTCCGTGCGGGCCGAGGGCTGGAGGGAGG
GCGGGAGGGAGGGCGAGAGGGAGGGCGAGAGTGAGAGCGGGAGGGGGGGA
GCGACGGGTGCAAATGTCTTTTTGGGGGGAACGGCTGAGgtaggtggagg
gagggagggagggagggagagagggagggagggagggagggagggaggga
gagtgggagggagggagggcctgcccgatatacatcgaaaggaccttttt
ttgacataggcgatttgaaattcccccctccctccctccctccctccctc
cctccctccctcccttcctccctccagCCCCACCCCCGCTTCCACAAGAC
TGTTGGCTATCATCCCTTTCCCCTCCAGgtatatctcgctcctccctcta
tacctttctaaccccgccctccctccctccctccctccctccctcctttc
tgactcctccctccctccctcccttcctccttccctccctctcgcccgca
gGACGAGGACAACAAGGAAAAAGAAGCAAAAACCCCTGCAGCTCCCACCC
CCACCGCGGCCAAAGGCAGAAGgtgaaagcttccctccctccctccctcc
ctccctccctccctccctccctgacctcactcacatcttcctcccccccg
ccctctctccctcgctcccttcctcctcttcagCGGCAGCCGCTACCTCC
AGCATCCTAACTCCCTGCACAGGATCATTGTTCGTCCGCCGACCCCTGTC
TCCCCCCCTCCCTCCTCCTCCTCCTCCTCTTCCTCTTCCTCCGTCATGCC
GTCCAAGAAAAAGgtttttgcttaagcctccccctccctccctccctccc
tccctttttttctctttgatcaacacccacccacgctcgcctttcctccc
tccctcccaccctcccttcctccctcccctagTCCCCCGTAGGCTTCTCC
AAACACAGAGAAAGACGAGAAGAGGAATCAATGACAGCTTCGAGgtaggg
agggagggagggaaggaggaaggggtttcatttctcttcctcttcatgac
aagaagtaggagactatgacactcaccctccctccctcccttcctccctc
cctccctccctccctccctctttctttattcgtagCGGCCAGCCCGCCgt
cctcccccccaaaccaagaagggagggagggagggcgggacgaaggacaa
gcacacgacactcccacctctctcatctctccctccccctgccatcgaca
cctcccgttccccgcagCCACATCAGGgtaggtcgctccctccctccctc
cctccctccctccctccctccctccctcccttcctcccgttctcccgtta
atcatctcaaacccctctccctccctccctccctcggtccctccctccag
CCCTCCCTCTCCCCCGCCTTCCCCCCACCCCTACCAATAAGGGGCAAGAG
CCCTTCCTTTCCTTCCTCTCCTCCCTCTTCCGACTCAATTGGGTGGAGAC
GGCGCTGTTCCCCCTCTCTATCCCGCCGGgtaggcaagcacctgccctcc
ctctctcccttcctcccttcctcccttccttcctctcctccctctttcga
ctcaattgcctgtcctgccttctctccctccctcccttcctccctccctc
cctcccatccttccttccttcctccttttcttgtttgcatcttctttttc
ccctccctgctactgaccatccctccctccctccctccctccctccctcc
ctccagGGGCACGGTACGGCCTCGTCTTTCACATCGAGCCCGTCGGGCCC
TCCCTCCCTTCCTCCGCCGCCTCCTCCCTCCCTTCCTCCACCCCCTATTC
GTCCAGGgtagggagggagggagggagcgaagggagggagggagggagcg
aagggaggaggcgggtggcatgaccaactctggctttgactagtgtcttt
gtcgtggggtgggggaagagggagggagggagggagggagggagggaggg
agggaggaagggagggaccaaaggaaaaagggacgaaactctagagagcc
gtggggttgattcactcattcccatcgccctcctccggtccctccctcca
cccctccctccttccagCCCTCCCGCCACCCCTCCTTGGGCACCCTCAAC
ACCGAATTTACCGTCCAAGATGGCAAGATCACTCTTGCCCCTCCCCCCCT
CCCTCCCTCCTCCTCCCTCCCTCCTCCTCCTCCTCCTGTCTGTGTCGCGG
GCCCTTCCTAA
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protein sequence of NO29G01760.1

>NO29G01760.1-protein ID=NO29G01760.1-protein|Name=NO29G01760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=571bp
MRPQKPPGGPSATKQAAAVAVAAAVSAATIATAAGQADAKAAWAARDFST
ARLSIEMLSRHREVEGSTLSFCHGETPRLLLFIHRPHGSIRSKEEFQRDW
FRFAADLRVEARLYDEEGERDGARERGRHRRLVLIKGCVLSPCAGDASSA
ALPLTDAERARVAAAGAEICYLVETEMEVKLRQLDRRLALTLVLALPEWT
GGASGDSAPPLPPPPSPPFSAAVADIRSSLLHLTLAPTYSTPSRVLSFPI
KIIEPLLLTSSYASHQDGSYINVQIENRHPSQALLIQDVGFHLDHSVRAE
GWREGGREGEREGESESGRGGATGANVFLGGTAEPHPRFHKTVGYHPFPL
QDEDNKEKEAKTPAAPTPTAAKGRSGSRYLQHPNSLHRIIVRPPTPVSPP
PSSSSSSSSSSVMPSKKKSPVGFSKHRERREEESMTASSGQPAPHQALPL
PRLPPTPTNKGQEPFLSFLSSLFRLNWVETALFPLSIPPGARYGLVFHIE
PVGPSLPSSAASSLPSSTPYSSRPSRHPSLGTLNTEFTVQDGKITLAPPP
LPPSSSLPPPPPPVCVAGPS*
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Synonyms
Publications