NO29G01750, NO29G01750 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO29G01750 vs. NCBI_GenBank
Match: CRG94693.1 (conserved Plasmodium protein, unknown function [Plasmodium gallinaceum]) HSP 1 Score: 130.6 bits (327), Expect = 5.400e-27 Identity = 53/119 (44.54%), Postives = 72/119 (60.50%), Query Frame = 0 Query: 25 CSVCMDDLDSGNYAEYRAGADMPWLPSPYCVTCIEVILKRQFTDYKQMIEGSKCAAEFRRLFTLGPPINLRDPKAFPCSGDGEVHSFWFMHDSQIHSAKLEGSLQGEARAEYWNYLRAF 144 C +C DD+D NY EY+ W PS +C+ C +++K Q+ Y ++ S+C E L +GPPIN++D FP S E++S WF D QIHSAKLEGSL GE R + WN L+ F Sbjct: 43 CLICYDDIDENNYIEYKTDEFSKWYPSLFCLNCTNILIKTQYHQYINNVQKSECLREQTNLLQMGPPINVKDKNGFPFSDGKEIYSLWFFSDKQIHSAKLEGSLVGEERIKVWNELKKF 161
BLAST of NO29G01750 vs. NCBI_GenBank
Match: CRH01428.1 (conserved Plasmodium protein, unknown function [Plasmodium relictum]) HSP 1 Score: 129.8 bits (325), Expect = 9.300e-27 Identity = 53/123 (43.09%), Postives = 73/123 (59.35%), Query Frame = 0 Query: 21 EGSECSVCMDDLDSGNYAEYRAGADMPWLPSPYCVTCIEVILKRQFTDYKQMIEGSKCAAEFRRLFTLGPPINLRDPKAFPCSGDGEVHSFWFMHDSQIHSAKLEGSLQGEARAEYWNYLRAF 144 E C +C DD+D NY EY+ W PS +C+ C ++LK Q+ Y ++ S+C E L +GPPIN++D FP S E++S WF D +IHSAKL+GSL GE R + WN L+ F Sbjct: 38 ENLVCLICYDDIDENNYIEYKTDEFSKWYPSSFCLNCTNILLKTQYHQYINNVQKSECLREQTNLLQMGPPINIKDKNGFPFSDGKEIYSLWFFSDKKIHSAKLDGSLVGEERIKVWNELKKF 160
BLAST of NO29G01750 vs. NCBI_GenBank
Match: GAW82589.1 (hypothetical protein, conserved [Plasmodium gonderi]) HSP 1 Score: 129.8 bits (325), Expect = 9.300e-27 Identity = 50/119 (42.02%), Postives = 73/119 (61.34%), Query Frame = 0 Query: 25 CSVCMDDLDSGNYAEYRAGADMPWLPSPYCVTCIEVILKRQFTDYKQMIEGSKCAAEFRRLFTLGPPINLRDPKAFPCSGDGEVHSFWFMHDSQIHSAKLEGSLQGEARAEYWNYLRAF 144 C +C DD+D NY EY+ W PS +C+ C E++++ Q+ Y ++ S+C E + L +GPPIN++D FP S E+HS W+ D +IH+AKL+GSL GE R WN L+ F Sbjct: 36 CLICYDDIDESNYIEYKTSHTSEWYPSMFCLNCTEILIQTQYHKYINNVQKSECLREQKNLLEMGPPINVKDKNGFPLSEGNEIHSLWYFCDKKIHTAKLDGSLVGEERVNLWNELKNF 154
BLAST of NO29G01750 vs. NCBI_GenBank
Match: SOV83394.1 (conserved Plasmodium protein, unknown function [Plasmodium sp. gorilla clade G3]) HSP 1 Score: 129.0 bits (323), Expect = 1.600e-26 Identity = 52/123 (42.28%), Postives = 74/123 (60.16%), Query Frame = 0 Query: 21 EGSECSVCMDDLDSGNYAEYRAGADMPWLPSPYCVTCIEVILKRQFTDYKQMIEGSKCAAEFRRLFTLGPPINLRDPKAFPCSGDGEVHSFWFMHDSQIHSAKLEGSLQGEARAEYWNYLRAF 144 E C +C DD+D NY EY+ W PS +C+TC +++ Q+ Y ++ S+C E L +GPPIN++D +P S D E++S W+ D QIHSAKL+GSL GE R + WN L+ F Sbjct: 48 ENLVCLICYDDIDESNYIEYKTDEHSKWYPSKFCLTCTGILIDSQYEKYINSVQKSECLKEQTSLLQMGPPINVKDKNGYPQSDDKEIYSLWYFCDKQIHSAKLKGSLMGEERMKLWNELKNF 170
BLAST of NO29G01750 vs. NCBI_GenBank
Match: SOV25218.1 (conserved Plasmodium protein, unknown function [Plasmodium sp. DRC-Itaito]) HSP 1 Score: 127.1 bits (318), Expect = 6.000e-26 Identity = 51/119 (42.86%), Postives = 72/119 (60.50%), Query Frame = 0 Query: 25 CSVCMDDLDSGNYAEYRAGADMPWLPSPYCVTCIEVILKRQFTDYKQMIEGSKCAAEFRRLFTLGPPINLRDPKAFPCSGDGEVHSFWFMHDSQIHSAKLEGSLQGEARAEYWNYLRAF 144 C +C DD+D NY EY+ W PS +C+ C +++ Q+ Y ++ S+C E L LGPPINL+D +P S D E++S W+ D +IHSAKL+GSL GE R + WN L+ F Sbjct: 52 CLICYDDIDESNYIEYKTDEHSKWYPSKFCLNCTGILIDSQYEKYINSVQKSECLKEQTSLLKLGPPINLKDKNGYPESDDKEIYSLWYFCDKKIHSAKLKGSLMGEERMKLWNELKNF 170
BLAST of NO29G01750 vs. NCBI_GenBank
Match: XP_001348648.1 (conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7] >ETW16018.1 hypothetical protein PFFVO_05120 [Plasmodium falciparum Vietnam Oak-Knoll (FVO)] >ETW29023.1 hypothetical protein PFFCH_03534 [Plasmodium falciparum FCH/4] >ETW33847.1 hypothetical protein PFTANZ_05476 [Plasmodium falciparum Tanzania (2000708)] >ETW39765.1 hypothetical protein PFNF135_05794 [Plasmodium falciparum NF135/5.C10] >ETW46421.1 hypothetical protein PFMALIP_05327 [Plasmodium falciparum MaliPS096_E11] >ETW54157.1 hypothetical protein PFUGPA_04027 [Plasmodium falciparum Palo Alto/Uganda] >ETW58466.1 hypothetical protein PFMC_05566 [Plasmodium falciparum CAMP/Malaysia] >EUR62952.1 hypothetical protein PFBG_05556 [Plasmodium falciparum 7G8] >EUT79015.1 hypothetical protein PFAG_05589 [Plasmodium falciparum Santa Lucia] >EWC73737.1 hypothetical protein C923_05615 [Plasmodium falciparum UGT5.1] >CZU00193.1 conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7] >PKC49488.1 hypothetical protein CK202_0193 [Plasmodium falciparum NF54]) HSP 1 Score: 126.7 bits (317), Expect = 7.800e-26 Identity = 57/142 (40.14%), Postives = 83/142 (58.45%), Query Frame = 0 Query: 2 SSNGEDNIQPHPYPHHEPEEGSECSVCMDDLDSGNYAEYRAGADMPWLPSPYCVTCIEVILKRQFTDYKQMIEGSKCAAEFRRLFTLGPPINLRDPKAFPCSGDGEVHSFWFMHDSQIHSAKLEGSLQGEARAEYWNYLRAF 144 SS E+ I+ H + P E C +C DD+D NY EY+ W PS +C+TC +++ Q+ Y ++ S+C E L +GPPIN++D +P S D E++S W+ D +IHSAKL+GSL GE R + WN L+ F Sbjct: 31 SSCEEEKIEEHAL--YVP-ENLVCLICYDDIDESNYIEYKTDEHSKWYPSKFCLTCTGILIDSQYEKYINSVQKSECLKEQTSLLKMGPPINVKDKNGYPQSDDKEIYSLWYFCDKKIHSAKLKGSLMGEERMKLWNELKNF 169
BLAST of NO29G01750 vs. NCBI_GenBank
Match: XP_012765541.1 (hypothetical protein PRSY57_1449100 [Plasmodium reichenowi] >CDO66962.1 conserved Plasmodium protein, unknown function [Plasmodium reichenowi] >KYN94148.1 hypothetical protein PRSY57_1449100 [Plasmodium reichenowi] >SOV83098.1 conserved Plasmodium protein, unknown function [Plasmodium reichenowi]) HSP 1 Score: 126.7 bits (317), Expect = 7.800e-26 Identity = 57/142 (40.14%), Postives = 83/142 (58.45%), Query Frame = 0 Query: 2 SSNGEDNIQPHPYPHHEPEEGSECSVCMDDLDSGNYAEYRAGADMPWLPSPYCVTCIEVILKRQFTDYKQMIEGSKCAAEFRRLFTLGPPINLRDPKAFPCSGDGEVHSFWFMHDSQIHSAKLEGSLQGEARAEYWNYLRAF 144 SS E+ I+ H + P E C +C DD+D NY EY+ W PS +C+TC +++ Q+ Y ++ S+C E L +GPPIN++D +P S D E++S W+ D +IHSAKL+GSL GE R + WN L+ F Sbjct: 31 SSCEEEKIEEHAL--YVP-ENLVCLICYDDIDESNYIEYKTDEHSKWYPSKFCLTCTGILIDSQYEKYINSVQKSECLKEQTSLLKMGPPINVKDKNGYPQSDDKEIYSLWYFCDKKIHSAKLKGSLMGEERMKLWNELKNF 169
BLAST of NO29G01750 vs. NCBI_GenBank
Match: XP_012336498.1 (hypothetical protein AK88_03458 [Plasmodium fragile] >XP_012337990.1 hypothetical protein AK88_04963 [Plasmodium fragile] >KJP85390.1 hypothetical protein AK88_04963 [Plasmodium fragile] >KJP86949.1 hypothetical protein AK88_03458 [Plasmodium fragile]) HSP 1 Score: 126.7 bits (317), Expect = 7.800e-26 Identity = 50/123 (40.65%), Postives = 74/123 (60.16%), Query Frame = 0 Query: 21 EGSECSVCMDDLDSGNYAEYRAGADMPWLPSPYCVTCIEVILKRQFTDYKQMIEGSKCAAEFRRLFTLGPPINLRDPKAFPCSGDGEVHSFWFMHDSQIHSAKLEGSLQGEARAEYWNYLRAF 144 E C +C DD+D NY EY+ W PS +C C ++++ Q+ Y ++ S+C E + L +GPPIN++D FP S E++S W+ D +IHSAKL+GSL+GE R + WN L+ F Sbjct: 32 ENLTCLICYDDIDESNYIEYKTSQFSEWHPSTFCQNCTGILIQTQYHKYINNVQKSECLREQKNLLEMGPPINVKDKNGFPFSDGNEIYSLWYFSDKKIHSAKLDGSLEGEERMKLWNELKNF 154
BLAST of NO29G01750 vs. NCBI_GenBank
Match: KNG78564.1 (hypothetical protein PFMG_04602 [Plasmodium falciparum IGH-CR14]) HSP 1 Score: 126.7 bits (317), Expect = 7.800e-26 Identity = 57/142 (40.14%), Postives = 83/142 (58.45%), Query Frame = 0 Query: 2 SSNGEDNIQPHPYPHHEPEEGSECSVCMDDLDSGNYAEYRAGADMPWLPSPYCVTCIEVILKRQFTDYKQMIEGSKCAAEFRRLFTLGPPINLRDPKAFPCSGDGEVHSFWFMHDSQIHSAKLEGSLQGEARAEYWNYLRAF 144 SS E+ I+ H + P E C +C DD+D NY EY+ W PS +C+TC +++ Q+ Y ++ S+C E L +GPPIN++D +P S D E++S W+ D +IHSAKL+GSL GE R + WN L+ F Sbjct: 31 SSCEEEKIEEHAL--YVP-ENLVCLICYDDIDESNYIEYKTDEHSKWYPSKFCLTCTGILIDSQYEKYINSVQKSECLKEQTSLLKMGPPINVKDKNGYPQSDDKEIYSLWYFCDKKIHSAKLKGSLMGEERMKLWNELKNF 169
BLAST of NO29G01750 vs. NCBI_GenBank
Match: SOS81322.1 (conserved Plasmodium protein, unknown function [Plasmodium sp. gorilla clade G1]) HSP 1 Score: 126.7 bits (317), Expect = 7.800e-26 Identity = 57/142 (40.14%), Postives = 83/142 (58.45%), Query Frame = 0 Query: 2 SSNGEDNIQPHPYPHHEPEEGSECSVCMDDLDSGNYAEYRAGADMPWLPSPYCVTCIEVILKRQFTDYKQMIEGSKCAAEFRRLFTLGPPINLRDPKAFPCSGDGEVHSFWFMHDSQIHSAKLEGSLQGEARAEYWNYLRAF 144 SS E+ I+ H + P E C +C DD+D NY EY+ W PS +C+TC +++ Q+ Y ++ S+C E L +GPPIN++D +P S D E++S W+ D +IHSAKL+GSL GE R + WN L+ F Sbjct: 31 SSCEEEKIEEHAL--YVP-ENLVCLICYDDIDESNYIEYKTDEHSKWYPSKFCLTCTGILIDSQYEKYINSVQKSECLKEQTSLLKMGPPINVKDKNGYPQSDDKEIYSLWYFCDKKIHSAKLKGSLMGEERMKLWNELKNF 169 The following BLAST results are available for this feature:
BLAST of NO29G01750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G01750 ID=NO29G01750|Name=NO29G01750|organism=Nannochloropsis oceanica|type=gene|length=1633bpback to top protein sequence of NO29G01750.1 >NO29G01750.1-protein ID=NO29G01750.1-protein|Name=NO29G01750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=196bpback to top protein sequence of NO29G01750.2 >NO29G01750.2-protein ID=NO29G01750.2-protein|Name=NO29G01750.2|organism=Nannochloropsis oceanica|type=polypeptide|length=127bpback to top Synonyms
Publications
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