NO29G01750, NO29G01750 (gene) Nannochloropsis oceanica

Overview
NameNO29G01750
Unique NameNO29G01750
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1633
Alignment locationchr29:553966..555598 +

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:553966..555598 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO29G01750 vs. NCBI_GenBank
Match: CRG94693.1 (conserved Plasmodium protein, unknown function [Plasmodium gallinaceum])

HSP 1 Score: 130.6 bits (327), Expect = 5.400e-27
Identity = 53/119 (44.54%), Postives = 72/119 (60.50%), Query Frame = 0
Query:   25 CSVCMDDLDSGNYAEYRAGADMPWLPSPYCVTCIEVILKRQFTDYKQMIEGSKCAAEFRRLFTLGPPINLRDPKAFPCSGDGEVHSFWFMHDSQIHSAKLEGSLQGEARAEYWNYLRAF 144
            C +C DD+D  NY EY+      W PS +C+ C  +++K Q+  Y   ++ S+C  E   L  +GPPIN++D   FP S   E++S WF  D QIHSAKLEGSL GE R + WN L+ F
Sbjct:   43 CLICYDDIDENNYIEYKTDEFSKWYPSLFCLNCTNILIKTQYHQYINNVQKSECLREQTNLLQMGPPINVKDKNGFPFSDGKEIYSLWFFSDKQIHSAKLEGSLVGEERIKVWNELKKF 161          
BLAST of NO29G01750 vs. NCBI_GenBank
Match: CRH01428.1 (conserved Plasmodium protein, unknown function [Plasmodium relictum])

HSP 1 Score: 129.8 bits (325), Expect = 9.300e-27
Identity = 53/123 (43.09%), Postives = 73/123 (59.35%), Query Frame = 0
Query:   21 EGSECSVCMDDLDSGNYAEYRAGADMPWLPSPYCVTCIEVILKRQFTDYKQMIEGSKCAAEFRRLFTLGPPINLRDPKAFPCSGDGEVHSFWFMHDSQIHSAKLEGSLQGEARAEYWNYLRAF 144
            E   C +C DD+D  NY EY+      W PS +C+ C  ++LK Q+  Y   ++ S+C  E   L  +GPPIN++D   FP S   E++S WF  D +IHSAKL+GSL GE R + WN L+ F
Sbjct:   38 ENLVCLICYDDIDENNYIEYKTDEFSKWYPSSFCLNCTNILLKTQYHQYINNVQKSECLREQTNLLQMGPPINIKDKNGFPFSDGKEIYSLWFFSDKKIHSAKLDGSLVGEERIKVWNELKKF 160          
BLAST of NO29G01750 vs. NCBI_GenBank
Match: GAW82589.1 (hypothetical protein, conserved [Plasmodium gonderi])

HSP 1 Score: 129.8 bits (325), Expect = 9.300e-27
Identity = 50/119 (42.02%), Postives = 73/119 (61.34%), Query Frame = 0
Query:   25 CSVCMDDLDSGNYAEYRAGADMPWLPSPYCVTCIEVILKRQFTDYKQMIEGSKCAAEFRRLFTLGPPINLRDPKAFPCSGDGEVHSFWFMHDSQIHSAKLEGSLQGEARAEYWNYLRAF 144
            C +C DD+D  NY EY+      W PS +C+ C E++++ Q+  Y   ++ S+C  E + L  +GPPIN++D   FP S   E+HS W+  D +IH+AKL+GSL GE R   WN L+ F
Sbjct:   36 CLICYDDIDESNYIEYKTSHTSEWYPSMFCLNCTEILIQTQYHKYINNVQKSECLREQKNLLEMGPPINVKDKNGFPLSEGNEIHSLWYFCDKKIHTAKLDGSLVGEERVNLWNELKNF 154          
BLAST of NO29G01750 vs. NCBI_GenBank
Match: SOV83394.1 (conserved Plasmodium protein, unknown function [Plasmodium sp. gorilla clade G3])

HSP 1 Score: 129.0 bits (323), Expect = 1.600e-26
Identity = 52/123 (42.28%), Postives = 74/123 (60.16%), Query Frame = 0
Query:   21 EGSECSVCMDDLDSGNYAEYRAGADMPWLPSPYCVTCIEVILKRQFTDYKQMIEGSKCAAEFRRLFTLGPPINLRDPKAFPCSGDGEVHSFWFMHDSQIHSAKLEGSLQGEARAEYWNYLRAF 144
            E   C +C DD+D  NY EY+      W PS +C+TC  +++  Q+  Y   ++ S+C  E   L  +GPPIN++D   +P S D E++S W+  D QIHSAKL+GSL GE R + WN L+ F
Sbjct:   48 ENLVCLICYDDIDESNYIEYKTDEHSKWYPSKFCLTCTGILIDSQYEKYINSVQKSECLKEQTSLLQMGPPINVKDKNGYPQSDDKEIYSLWYFCDKQIHSAKLKGSLMGEERMKLWNELKNF 170          
BLAST of NO29G01750 vs. NCBI_GenBank
Match: SOV25218.1 (conserved Plasmodium protein, unknown function [Plasmodium sp. DRC-Itaito])

HSP 1 Score: 127.1 bits (318), Expect = 6.000e-26
Identity = 51/119 (42.86%), Postives = 72/119 (60.50%), Query Frame = 0
Query:   25 CSVCMDDLDSGNYAEYRAGADMPWLPSPYCVTCIEVILKRQFTDYKQMIEGSKCAAEFRRLFTLGPPINLRDPKAFPCSGDGEVHSFWFMHDSQIHSAKLEGSLQGEARAEYWNYLRAF 144
            C +C DD+D  NY EY+      W PS +C+ C  +++  Q+  Y   ++ S+C  E   L  LGPPINL+D   +P S D E++S W+  D +IHSAKL+GSL GE R + WN L+ F
Sbjct:   52 CLICYDDIDESNYIEYKTDEHSKWYPSKFCLNCTGILIDSQYEKYINSVQKSECLKEQTSLLKLGPPINLKDKNGYPESDDKEIYSLWYFCDKKIHSAKLKGSLMGEERMKLWNELKNF 170          
BLAST of NO29G01750 vs. NCBI_GenBank
Match: XP_001348648.1 (conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7] >ETW16018.1 hypothetical protein PFFVO_05120 [Plasmodium falciparum Vietnam Oak-Knoll (FVO)] >ETW29023.1 hypothetical protein PFFCH_03534 [Plasmodium falciparum FCH/4] >ETW33847.1 hypothetical protein PFTANZ_05476 [Plasmodium falciparum Tanzania (2000708)] >ETW39765.1 hypothetical protein PFNF135_05794 [Plasmodium falciparum NF135/5.C10] >ETW46421.1 hypothetical protein PFMALIP_05327 [Plasmodium falciparum MaliPS096_E11] >ETW54157.1 hypothetical protein PFUGPA_04027 [Plasmodium falciparum Palo Alto/Uganda] >ETW58466.1 hypothetical protein PFMC_05566 [Plasmodium falciparum CAMP/Malaysia] >EUR62952.1 hypothetical protein PFBG_05556 [Plasmodium falciparum 7G8] >EUT79015.1 hypothetical protein PFAG_05589 [Plasmodium falciparum Santa Lucia] >EWC73737.1 hypothetical protein C923_05615 [Plasmodium falciparum UGT5.1] >CZU00193.1 conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7] >PKC49488.1 hypothetical protein CK202_0193 [Plasmodium falciparum NF54])

HSP 1 Score: 126.7 bits (317), Expect = 7.800e-26
Identity = 57/142 (40.14%), Postives = 83/142 (58.45%), Query Frame = 0
Query:    2 SSNGEDNIQPHPYPHHEPEEGSECSVCMDDLDSGNYAEYRAGADMPWLPSPYCVTCIEVILKRQFTDYKQMIEGSKCAAEFRRLFTLGPPINLRDPKAFPCSGDGEVHSFWFMHDSQIHSAKLEGSLQGEARAEYWNYLRAF 144
            SS  E+ I+ H    + P E   C +C DD+D  NY EY+      W PS +C+TC  +++  Q+  Y   ++ S+C  E   L  +GPPIN++D   +P S D E++S W+  D +IHSAKL+GSL GE R + WN L+ F
Sbjct:   31 SSCEEEKIEEHAL--YVP-ENLVCLICYDDIDESNYIEYKTDEHSKWYPSKFCLTCTGILIDSQYEKYINSVQKSECLKEQTSLLKMGPPINVKDKNGYPQSDDKEIYSLWYFCDKKIHSAKLKGSLMGEERMKLWNELKNF 169          
BLAST of NO29G01750 vs. NCBI_GenBank
Match: XP_012765541.1 (hypothetical protein PRSY57_1449100 [Plasmodium reichenowi] >CDO66962.1 conserved Plasmodium protein, unknown function [Plasmodium reichenowi] >KYN94148.1 hypothetical protein PRSY57_1449100 [Plasmodium reichenowi] >SOV83098.1 conserved Plasmodium protein, unknown function [Plasmodium reichenowi])

HSP 1 Score: 126.7 bits (317), Expect = 7.800e-26
Identity = 57/142 (40.14%), Postives = 83/142 (58.45%), Query Frame = 0
Query:    2 SSNGEDNIQPHPYPHHEPEEGSECSVCMDDLDSGNYAEYRAGADMPWLPSPYCVTCIEVILKRQFTDYKQMIEGSKCAAEFRRLFTLGPPINLRDPKAFPCSGDGEVHSFWFMHDSQIHSAKLEGSLQGEARAEYWNYLRAF 144
            SS  E+ I+ H    + P E   C +C DD+D  NY EY+      W PS +C+TC  +++  Q+  Y   ++ S+C  E   L  +GPPIN++D   +P S D E++S W+  D +IHSAKL+GSL GE R + WN L+ F
Sbjct:   31 SSCEEEKIEEHAL--YVP-ENLVCLICYDDIDESNYIEYKTDEHSKWYPSKFCLTCTGILIDSQYEKYINSVQKSECLKEQTSLLKMGPPINVKDKNGYPQSDDKEIYSLWYFCDKKIHSAKLKGSLMGEERMKLWNELKNF 169          
BLAST of NO29G01750 vs. NCBI_GenBank
Match: XP_012336498.1 (hypothetical protein AK88_03458 [Plasmodium fragile] >XP_012337990.1 hypothetical protein AK88_04963 [Plasmodium fragile] >KJP85390.1 hypothetical protein AK88_04963 [Plasmodium fragile] >KJP86949.1 hypothetical protein AK88_03458 [Plasmodium fragile])

HSP 1 Score: 126.7 bits (317), Expect = 7.800e-26
Identity = 50/123 (40.65%), Postives = 74/123 (60.16%), Query Frame = 0
Query:   21 EGSECSVCMDDLDSGNYAEYRAGADMPWLPSPYCVTCIEVILKRQFTDYKQMIEGSKCAAEFRRLFTLGPPINLRDPKAFPCSGDGEVHSFWFMHDSQIHSAKLEGSLQGEARAEYWNYLRAF 144
            E   C +C DD+D  NY EY+      W PS +C  C  ++++ Q+  Y   ++ S+C  E + L  +GPPIN++D   FP S   E++S W+  D +IHSAKL+GSL+GE R + WN L+ F
Sbjct:   32 ENLTCLICYDDIDESNYIEYKTSQFSEWHPSTFCQNCTGILIQTQYHKYINNVQKSECLREQKNLLEMGPPINVKDKNGFPFSDGNEIYSLWYFSDKKIHSAKLDGSLEGEERMKLWNELKNF 154          
BLAST of NO29G01750 vs. NCBI_GenBank
Match: KNG78564.1 (hypothetical protein PFMG_04602 [Plasmodium falciparum IGH-CR14])

HSP 1 Score: 126.7 bits (317), Expect = 7.800e-26
Identity = 57/142 (40.14%), Postives = 83/142 (58.45%), Query Frame = 0
Query:    2 SSNGEDNIQPHPYPHHEPEEGSECSVCMDDLDSGNYAEYRAGADMPWLPSPYCVTCIEVILKRQFTDYKQMIEGSKCAAEFRRLFTLGPPINLRDPKAFPCSGDGEVHSFWFMHDSQIHSAKLEGSLQGEARAEYWNYLRAF 144
            SS  E+ I+ H    + P E   C +C DD+D  NY EY+      W PS +C+TC  +++  Q+  Y   ++ S+C  E   L  +GPPIN++D   +P S D E++S W+  D +IHSAKL+GSL GE R + WN L+ F
Sbjct:   31 SSCEEEKIEEHAL--YVP-ENLVCLICYDDIDESNYIEYKTDEHSKWYPSKFCLTCTGILIDSQYEKYINSVQKSECLKEQTSLLKMGPPINVKDKNGYPQSDDKEIYSLWYFCDKKIHSAKLKGSLMGEERMKLWNELKNF 169          
BLAST of NO29G01750 vs. NCBI_GenBank
Match: SOS81322.1 (conserved Plasmodium protein, unknown function [Plasmodium sp. gorilla clade G1])

HSP 1 Score: 126.7 bits (317), Expect = 7.800e-26
Identity = 57/142 (40.14%), Postives = 83/142 (58.45%), Query Frame = 0
Query:    2 SSNGEDNIQPHPYPHHEPEEGSECSVCMDDLDSGNYAEYRAGADMPWLPSPYCVTCIEVILKRQFTDYKQMIEGSKCAAEFRRLFTLGPPINLRDPKAFPCSGDGEVHSFWFMHDSQIHSAKLEGSLQGEARAEYWNYLRAF 144
            SS  E+ I+ H    + P E   C +C DD+D  NY EY+      W PS +C+TC  +++  Q+  Y   ++ S+C  E   L  +GPPIN++D   +P S D E++S W+  D +IHSAKL+GSL GE R + WN L+ F
Sbjct:   31 SSCEEEKIEEHAL--YVP-ENLVCLICYDDIDESNYIEYKTDEHSKWYPSKFCLTCTGILIDSQYEKYINSVQKSECLKEQTSLLKMGPPINVKDKNGYPQSDDKEIYSLWYFCDKKIHSAKLKGSLMGEERMKLWNELKNF 169          
The following BLAST results are available for this feature:
BLAST of NO29G01750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CRG94693.15.400e-2744.54conserved Plasmodium protein, unknown function [Pl... [more]
CRH01428.19.300e-2743.09conserved Plasmodium protein, unknown function [Pl... [more]
GAW82589.19.300e-2742.02hypothetical protein, conserved [Plasmodium gonder... [more]
SOV83394.11.600e-2642.28conserved Plasmodium protein, unknown function [Pl... [more]
SOV25218.16.000e-2642.86conserved Plasmodium protein, unknown function [Pl... [more]
XP_001348648.17.800e-2640.14conserved Plasmodium protein, unknown function [Pl... [more]
XP_012765541.17.800e-2640.14hypothetical protein PRSY57_1449100 [Plasmodium re... [more]
XP_012336498.17.800e-2640.65hypothetical protein AK88_03458 [Plasmodium fragil... [more]
KNG78564.17.800e-2640.14hypothetical protein PFMG_04602 [Plasmodium falcip... [more]
SOS81322.17.800e-2640.14conserved Plasmodium protein, unknown function [Pl... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR097ncniR097Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G01750.1NO29G01750.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO29G01750.2NO29G01750.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|613508gene_11553Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G01750.1NO29G01750.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO29G01750.2NO29G01750.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G01750 ID=NO29G01750|Name=NO29G01750|organism=Nannochloropsis oceanica|type=gene|length=1633bp
CAGGCGCAGACCGTAGCCACCGCCGCAGCAGTAGGCTGTCACCCCTCCCC
TCCCTTCCTCCCTGCCTCCTTCCATGAGTAGCAACGGCGAGGACAATATC
CAGCCTCATCCATACCCCCACCACGAGCCGGAGGAGGGAAGTGAGTGCTC
AGTGTGCATGGACGACTTGGACAGTGGGAATTATGCAGAATACAGGGCAG
GCGCAGgtaggtagggagggaggggtgatcgtaccaataatgtacagaga
gaacacgtctaataagcgctctgtagccgactgatccctccctccttctc
tcccatactccctacctccctctttcttttcgcagACATGCCCTGGCTTC
CCTCTCCTTACTGCGTAACTTGCATCGAGGTTATCCTCAAACGgtacctc
tccaccctacctccttccaaccctctctccgtctcccttttcttccgtat
gggcccttaatttgattcatcaacccaccctccctccctccctccctccg
acccgcattcgatcctccctccttgccctcagACAGTTCACGGACTACAA
GCAGATGATCGAAGGCAGCAAATGCGCCGCTGAATTCCGTCGTCTTTTCA
CCCTTGGCCCGCCCATCAACCTCCGGgtaggtcgaaaaaccagcctttcc
tctcttcctccctccttccctacttttgtccctcccctctctacggcaat
ccaacctccctccctctaattttccttccctccctcaccagGATCCGAAA
GCCTTTCCGTGTTCGGGCGACGGGGAAGTCCACTCGTTTTGgtagggagg
gaggcaggcagggagggagggaggatagacgaggtgcatatctcactttc
ccttccttacgtccttaccttttccctcccttcctgacccagGTTCATGC
ACGACAGCCAAATCCACTCTGCCAAGCTTGAAGGGTAAGACGGGCTCTCG
CCCCCTCCCTCCTTCCCTCCCTTCCCGACTTCCCTCTTCTTTCATCCCCT
TTCTCCCTCGCTTTCCTCTTTCTCCACCTATCTTTTGAGATGCTTCAACT
CGTCCTTTCATTTCTACCTTCACTCCCTCCCTCCCTCTTTTCTCCTCCCT
CCCTCCCTCCCTCCAGCTCCCTCCAAGGCGAGGCCCGGGCCGAGTACTGG
AATTACTTGAGAGCCTTCCAACCACCACCCAAGGAGGGAGGGAAGGAGgt
gagggagggaaggagggagggagggagggagggagggagggagggaagga
gggaaggtttctggcgagtgctcattatctttctcatggtacctataaat
cgctcacataaagGAGGATGACGAAGAGGAGGAGAGGGGAAAGGAAATGG
GAGATGAGAAGGACGAGAAGGAGCAGGGAAATAGAGGAGGAGGAGGAGGA
AGAGGAGAAGGAGGAGAAATAAAAACAGCAGTGAAGACATAATTGGAAGG
GGACAGAAGGAGAGAGGCGGAGAGGAAGGATGAGAGGAAGCACAATGTTT
ATAAGTATATTCACAGAAAAAAAGCATAAGACCGTGCCCAGAATTTCACA
TGATAAAATGAAATGAAATGGTGGGTTTTGTTGTGGGTATTTTTCCTTGT
CTGAGCGTCTCTTTTTTCGATGCTGGTGACTTG
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protein sequence of NO29G01750.1

>NO29G01750.1-protein ID=NO29G01750.1-protein|Name=NO29G01750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=196bp
MSSNGEDNIQPHPYPHHEPEEGSECSVCMDDLDSGNYAEYRAGADMPWLP
SPYCVTCIEVILKRQFTDYKQMIEGSKCAAEFRRLFTLGPPINLRDPKAF
PCSGDGEVHSFWFMHDSQIHSAKLEGSLQGEARAEYWNYLRAFQPPPKEG
GKEEDDEEEERGKEMGDEKDEKEQGNRGGGGGRGEGGEIKTAVKT*
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protein sequence of NO29G01750.2

>NO29G01750.2-protein ID=NO29G01750.2-protein|Name=NO29G01750.2|organism=Nannochloropsis oceanica|type=polypeptide|length=127bp
MSSNGEDNIQPHPYPHHEPEEGSECSVCMDDLDSGNYAEYRAGADMPWLP
SPYCVTCIEVILKRQFTDYKQMIEGSKCAAEFRRLFTLGPPINLRDPKAF
PCSGDGEVHSFWFMHDSQIHSAKLEG*
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Synonyms
Publications