NO29G01690, NO29G01690 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO29G01690 vs. NCBI_GenBank
Match: XP_020613224.1 (structural maintenance of chromosomes flexible hinge domain-containing protein 1-like [Orbicella faveolata] >XP_020613225.1 structural maintenance of chromosomes flexible hinge domain-containing protein 1-like [Orbicella faveolata]) HSP 1 Score: 87.4 bits (215), Expect = 2.300e-13 Identity = 74/260 (28.46%), Postives = 110/260 (42.31%), Query Frame = 0 Query: 514 DLQEMEKEKA--RPAVTLPNHPPRNCAGFKYIGHVASLGFVKDHAMARLISSCIGNKLMGALVFEQQAEMKTYQAKVSNPVLATAIDILIPFYTYGPRGSGQKCERTNLDKSRAALPLPHIQAEGNPRYMVNLIELSEEDEKLRDTLFFNLLRHSLVFTTKDAALKYRSWCRERLTMCGKIFTEDGWKIDQSGFVEVNTCLRGRGGAPPTRLD--FVFGEIPVVKSKAFRHLKRDTAFLDKLIEPIQARESAMEELQQLE 770 +L ++E +A R +T P HPP + G VA L +V D +AR++S + +K+ AL + + K Y A S AT L+PF GS K LP P + VNL+E + ++ LR +LF+NLL ++V + YR C I T DG I G ++ + PP D F FG +P + +R LK LD+L + E EE++ E Sbjct: 1683 ELNQLESSQATTRTVITQPGHPPARIRHY-IKGIVAELAYVSDPLVARILSWYLQSKMPVALTTTTEQQRKVYDAGCSAYCEAT----LLPFSKRDFDGSDGK-------PLPLELPAPPSNYRSPIEFAVNLLEFTSDNGYLRSSLFWNLLSKTIVVKDLKSGQTYREHLTRMKQSCPTILTRDGNMIASDGLMD------PKKRCPPRMEDLRFAFGALPAREKVRYRELKERCEALDRLQLTFEKHEKEAEEVRAKE 1924
BLAST of NO29G01690 vs. NCBI_GenBank
Match: PRP81795.1 (putative fatty-acid-CoA ligase FadD9 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase) [Planoprotostelium fungivorum]) HSP 1 Score: 83.2 bits (204), Expect = 4.400e-12 Identity = 64/224 (28.57%), Postives = 98/224 (43.75%), Query Frame = 0 Query: 543 IGHVASLGFVKDHAMARLISSCIGNKLMGALVFEQQAEMKTYQAKVSNPVLATAIDILIPFYTY-GPRGSGQKCERTNLDKSRAALPLPHIQAEGNPRYMVNLIELSEEDEKLRDTLFFNLLRHSLVFTTKDAALKYRSWCRERLTMCGKIF-TEDGWKIDQSGFVEVNTCLRGRGGAPPTRLDFVFGEIPVVKSKAFRHLKRDTAFLDKLIEPIQARESAMEE 765 IG V+ L +V D + L + G K+ A++ + + K Y N A + + Y G RG + ++L + A P +G Y VN I+L + E LR T+F+NLL+ ++VF T D A KYRSW R C + E+G +D GFV + R R F FG + V + K+ + L+ I+ A +E Sbjct: 3358 IGIVSDLAYVDDERESILYAKMCGPKVQ-AILLDTNEQFKKYYNMYRNASSAASFLSMQNVLAYSGDRGRSSQGGNSDLIPLQPAAGAP---TDGFVGYAVNRIQLKPQHEFLRKTVFWNLLKETMVFRTLDQAQKYRSWVSSRGQRCPTLLAVEEGEVVDAQGFVTIGKKQRSRDA-------FSFGSMSVTDQPEYSLYKQSIDMCNALLASIKKINQAEKE 3570
BLAST of NO29G01690 vs. NCBI_GenBank
Match: XP_001632125.1 (predicted protein [Nematostella vectensis] >EDO40062.1 predicted protein [Nematostella vectensis]) HSP 1 Score: 83.2 bits (204), Expect = 4.400e-12 Identity = 78/280 (27.86%), Postives = 120/280 (42.86%), Query Frame = 0 Query: 503 DVQREHHKLSRDLQEMEKEKARPAVTLPN----HPPRNCAGFKYI-GHVASLGFVKDHAMARLISSCIGNKLMGALVFEQQAEMKTYQAKVSNPVLATAIDILIPFYTYGPRGSGQKCERTNLDKSRAAL-----PLPHIQAEGNPRYMVNLIELSEEDEKLRDTLFFNLLRHSLVFTTKDAALKYRSWCRERLTMCGKIFTEDGWKIDQSGFVEVNTCLRGRGGAPPTRLD---FVFGEIPVVKSKAFRHLKRDTAFLDKLIEPIQARESAMEELQQLE 770 DV ++ + L +M A+ +V LP+ HPP +YI G VA L +V D ++RL+S + +K+ AL Q + K Y A + A D L+PF + N D S + P P + ++ +NL+E S + LR TLF++LL ++V + YR C I T DG I G ++ P RLD F FG +P + FR L +L L E +Q ++ +E ++Q E Sbjct: 1774 DVSKQLQSVMGQLAQM--AVAQNSVRLPSIPHGHPPTRIR--QYIKGIVAELAYVSDPDLSRLLSWYLQHKMGVALTSTIQQQRKVYDANCA----AYCEDTLLPF------------NKKNFDGSDGRVLPLEFPQPPANFSSSIQFAINLLEFSSSNGYLRSTLFWSLLSKTMVIDDLRSGQVYREHLVRMRFPCPTILTRDGHVIASDGLMDPKK-------RCPQRLDNLKFTFGALPPAEQPHFRELNETQRYLQDLSEALQEFDNDVEVVKQAE 2026
BLAST of NO29G01690 vs. NCBI_GenBank
Match: PFX31845.1 (Structural maintenance of chromosomes flexible hinge domain-containing protein 1 [Stylophora pistillata]) HSP 1 Score: 82.4 bits (202), Expect = 7.500e-12 Identity = 72/263 (27.38%), Postives = 110/263 (41.83%), Query Frame = 0 Query: 504 VQREHHKLSRDLQEMEKEKARPAVTLPNHPPRNCAGFKYI-GHVASLGFVKDHAMARLISSCIGNKLMGALVFEQQAEMKTYQAKVSNPVLATAIDILIPFYTYGPRGSGQKCERTNLDKSRAALPLPHIQAEGNPRYMVNLIELSEEDEKLRDTLFFNLLRHSLVFTTKDAALKYRSWCRERLTMCGKIFTEDGWKIDQSGFVEVNTCLRGRGGAPPTRLD---FVFGEIPVVKSKAFRHLKRDTAFLDKLIEPIQARESAM 763 +Q H+L++ E + RP + HPP +YI G VA L FV D +AR++S + +K+ +L + + K Y A AT L+PF G K LP P + VNL+E + ++ LR TLF+NLL ++V + YR + C I T DG I G ++ P RL+ F FG +P ++ +R LK L++L ++ E M Sbjct: 1676 LQNRRHELNQ--FEANRTNTRPPIMQQGHPPARIR--QYIKGVVAELAFVSDPLLARILSWYLQSKMSVSLTSTTEQQRKVYDAGCPAYCEAT----LLPFTKRDFDGIDGK-------SLPLELPSPPSNYRSPIEFAVNLLEFTSDNGYLRSTLFWNLLSKTIVVKDLKSGQAYREHLTKMKQSCPTILTRDGNMIASDGLMDPKR-------RCPQRLEDLKFAFGALPARETTHYRELKERCEALERLNATVEKYEQEM 1916
BLAST of NO29G01690 vs. NCBI_GenBank
Match: XP_022780250.1 (LOW QUALITY PROTEIN: structural maintenance of chromosomes flexible hinge domain-containing protein 1-like [Stylophora pistillata]) HSP 1 Score: 82.4 bits (202), Expect = 7.500e-12 Identity = 72/263 (27.38%), Postives = 110/263 (41.83%), Query Frame = 0 Query: 504 VQREHHKLSRDLQEMEKEKARPAVTLPNHPPRNCAGFKYI-GHVASLGFVKDHAMARLISSCIGNKLMGALVFEQQAEMKTYQAKVSNPVLATAIDILIPFYTYGPRGSGQKCERTNLDKSRAALPLPHIQAEGNPRYMVNLIELSEEDEKLRDTLFFNLLRHSLVFTTKDAALKYRSWCRERLTMCGKIFTEDGWKIDQSGFVEVNTCLRGRGGAPPTRLD---FVFGEIPVVKSKAFRHLKRDTAFLDKLIEPIQARESAM 763 +Q H+L++ E + RP + HPP +YI G VA L FV D +AR++S + +K+ +L + + K Y A AT L+PF G K LP P + VNL+E + ++ LR TLF+NLL ++V + YR + C I T DG I G ++ P RL+ F FG +P ++ +R LK L++L ++ E M Sbjct: 1669 LQNRRHELNQ--FEANRTNTRPPIMQQGHPPARIR--QYIKGVVAELAFVSDPLLARILSWYLQSKMSVSLTSTTEQQRKVYDAGCPAYCEAT----LLPFTKRDFDGIDGK-------SLPLELPSPPSNYRSPIEFAVNLLEFTSDNGYLRSTLFWNLLSKTIVVKDLKSGQAYREHLTKMKQSCPTILTRDGNMIASDGLMDPKR-------RCPQRLEDLKFAFGALPARETTHYRELKERCEALERLNATVEKYEQEM 1909
BLAST of NO29G01690 vs. NCBI_GenBank
Match: XP_015762340.1 (PREDICTED: structural maintenance of chromosomes flexible hinge domain-containing protein 1-like [Acropora digitifera]) HSP 1 Score: 75.1 bits (183), Expect = 1.200e-9 Identity = 66/251 (26.29%), Postives = 106/251 (42.23%), Query Frame = 0 Query: 517 EMEKEKARPAVTLPNHPPRNCAGFKYIGHVASLGFVKDHAMARLISSCIGNKLMGALVFEQQAEMKTYQAKVSNPVLATAIDILIPFYTYGPRGSGQKCERTNLDKSRAALPLPHIQAEGNPRYMVNLIELSEEDEKLRDTLFFNLLRHSLVFTTKDAALKYRSWCRERLTMCGKIFTEDGWKIDQSGFVEVNTCLRGRGGAPPTRLDFVFGEIPVVKSKAFRHLKRDTAFLDKLIEPIQARESAMEELQQ 768 E + RPA+ +P PP + G VA L +V D +AR++S + +K+ AL + + K Y A S AT + S + + + LP P + VNL+E + E+ LR TLF+NLL ++V + YR + C I T DG I G ++ + R A L F FG +P ++ R L L+KL + ++ E +E +++ Sbjct: 1641 EASETATRPAI-VPQGPPARIRQYMK-GIVAELAYVSDPLLARILSWHLQSKMSVALTSTTEQQRKVYDAGYSAYCEATILGF-----------SKRDFDGNDGKPLPLELPSPPSNYRSPIEFAVNLLEFTGENGYLRCTLFWNLLSKTIVVKDLRSGQIYREHLTKMKQSCPTILTRDGNMIASDGLMDP----KRRCPARLEDLKFAFGAMPARETAKHRDLTEKCEALEKLHKVCESHEKEIENVRE 1874
BLAST of NO29G01690 vs. NCBI_GenBank
Match: EWM24681.1 (hypothetical protein Naga_100123g10 [Nannochloropsis gaditana]) HSP 1 Score: 74.7 bits (182), Expect = 1.600e-9 Identity = 66/267 (24.72%), Postives = 125/267 (46.82%), Query Frame = 0 Query: 510 KLSRDLQEMEKEKARPAVTLPNH--PPRNCAGFKYIGHVASLGFVKDHAMARLISSCIGNKLMGALVFEQQAEMKTYQAKVSNPVLATAIDILIPFYTYGPRGSGQKCERTNLDKSRAALPLPHIQAEGNPR-YMVNLIELSEEDEKLRDTLFFNLLRHSLVFTTKDAALKYRSWCRERLTMCGKIFT-EDGWKIDQSGFVEVNTCLRGRGGAPPTRLDFVFGEIPVVKSKAFRHLKRDTAFLDKLIEPIQARESAMEELQQLESDS 773 +L DL+ + ++ P H P GFK V ++G V D +A ++S + M A++ + A+ K + S+ + + D T + E+ DK LPL + + N R + VN I L +EDE LR ++F+++ ++++ T+D AL YR +C+ R I DG ++ SG ++ + C R + RL+FVFG +++ AF+ +++L++ + + + +Q+ D+ Sbjct: 1644 RLENDLRALRSQEITPLRRREGHLVPAVLSQGFK---EVVAVGLVADRRLAEMLSWYATPRNMKAVICQTNADYKRIRLLQSDVTVYSLQD------TEEYWSKSRTKEQILKDK---CLPLQPVDPKFNFRCHAVNAIILRDEDEHLRMSVFWSMFSNTIILETEDDALAYREYCKRRGIRRPTILCYTDGRRLRGSGPLDGSDCFR---PSDAQRLEFVFGGQDPLETDAFKKQVIAVEKVEQLLQLLTEKNMYQDMIQEGRQDN 1895
BLAST of NO29G01690 vs. NCBI_GenBank
Match: XP_020438814.1 (hypothetical protein PPL_00513 [Heterostelium album PN500] >EFA86710.1 hypothetical protein PPL_00513 [Heterostelium album PN500]) HSP 1 Score: 71.6 bits (174), Expect = 1.300e-8 Identity = 66/247 (26.72%), Postives = 111/247 (44.94%), Query Frame = 0 Query: 515 LQEMEKEKARP--AVTLPNHP---------PRNCAGFKYIGHVASLGFVKDHAMARLISSCIGNKLMGALVFEQQAEMKTYQ--AKVSNPVLATAIDILIPFYTYGPRGSGQKCERTNLDKSRAA-LPL---PHIQAEGNPRYMVNLIELSEEDEKLRDTLFFNLLRHSLVFTTKDAALKYRSWCRERLTMCGKIFTEDGWK-IDQSGFVEVNTCLRGRGGAPPTRLD--FVFGEIPVVKSKAFRHL 742 LQE++ ++P A +LP++P + IG V L ++ AR+IS G KL +V + + Y NPV ++D++ F+ + S D+ R+ LPL P+ +G ++VN I++ E+ EKLR +L + L + +VF + + YR +C + CG I + + I+ SG V V G T D F+ G++P+ +S F L Sbjct: 1720 LQEIDDMNSQPRRAASLPSNPISREMSELARSSTEETGIIGLVLDLFCIESKEEARVISKMAGRKLETVVVLNKDYLSRYYTQFQHSRNPVHFMSLDLISAFHDRNEQSS-------QYDQPRSTKLPLQLVPNAPTQGFVDFLVNRIQMKEKHEKLRRSLGWTLFKDCIVFQSLKDGMAYRDFCMKMKRNCGTIIALNELELIESSGMVMV--------GKKETATDDRFLLGQLPISESPDFARL 1951
BLAST of NO29G01690 vs. NCBI_GenBank
Match: KXJ11881.1 (Structural maintenance of chromosomes flexible hinge domain-containing protein 1 [Exaiptasia pallida]) HSP 1 Score: 66.6 bits (161), Expect = 4.200e-7 Identity = 58/228 (25.44%), Postives = 96/228 (42.11%), Query Frame = 0 Query: 544 GHVASLGFVKDHAMARLISSCIGNKLMGALVFEQQAEMKTYQAKVSNPVLATAIDILIPFYTYGPRGSGQKCERTNLDKSRAALPLPHIQAEGNPRYMVNLIELSEEDEKLRDTLFFNLLRHSLVFTTKDAALKYRSWCRERLTMCGKIFTEDGWKIDQSGFVEVNTCLRGRGGAPPTRLDFVFGEIPVVKSKAFRHLKRDTAFLDKLIEPIQARESAMEELQQLESD 772 G VA L +V D +ARL+S + +K+ L + K Y S A ++PF G K NL P P + ++ +NL+E S + LR TL+++LL ++V ++A YR + C I T DG I G ++ + R + L F FG +P + R L+ L+ L ++ E +E +++ E + Sbjct: 1295 GVVAELAYVSDPDIARLLSWYLQSKMGVCLTTSIDKQKKVYDLGFS----AYCESTILPFSKKDFDGRDGK----NLP---LEFPRPPNNFKSTIQFAINLLEFSSSNGYLRSTLYWSLLSKTMVIENLESAQIYRQHLVQMRYPCPTILTRDGHVIASDGLMDP----KRRCPRSLSDLKFTFGALPPSELPVNRELQTTLVHLEDLNTSVEEYEKTLETVKRKEDE 1507
BLAST of NO29G01690 vs. NCBI_GenBank
Match: XP_020904654.1 (structural maintenance of chromosomes flexible hinge domain-containing protein 1-like [Exaiptasia pallida]) HSP 1 Score: 66.6 bits (161), Expect = 4.200e-7 Identity = 58/228 (25.44%), Postives = 96/228 (42.11%), Query Frame = 0 Query: 544 GHVASLGFVKDHAMARLISSCIGNKLMGALVFEQQAEMKTYQAKVSNPVLATAIDILIPFYTYGPRGSGQKCERTNLDKSRAALPLPHIQAEGNPRYMVNLIELSEEDEKLRDTLFFNLLRHSLVFTTKDAALKYRSWCRERLTMCGKIFTEDGWKIDQSGFVEVNTCLRGRGGAPPTRLDFVFGEIPVVKSKAFRHLKRDTAFLDKLIEPIQARESAMEELQQLESD 772 G VA L +V D +ARL+S + +K+ L + K Y S A ++PF G K NL P P + ++ +NL+E S + LR TL+++LL ++V ++A YR + C I T DG I G ++ + R + L F FG +P + R L+ L+ L ++ E +E +++ E + Sbjct: 1700 GVVAELAYVSDPDIARLLSWYLQSKMGVCLTTSIDKQKKVYDLGFS----AYCESTILPFSKKDFDGRDGK----NLP---LEFPRPPNNFKSTIQFAINLLEFSSSNGYLRSTLYWSLLSKTMVIENLESAQIYRQHLVQMRYPCPTILTRDGHVIASDGLMDP----KRRCPRSLSDLKFTFGALPPSELPVNRELQTTLVHLEDLNTSVEEYEKTLETVKRKEDE 1912 The following BLAST results are available for this feature:
BLAST of NO29G01690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 10
Relationships
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G01690 ID=NO29G01690|Name=NO29G01690|organism=Nannochloropsis oceanica|type=gene|length=5910bpback to top protein sequence of NO29G01690.1 >NO29G01690.1-protein ID=NO29G01690.1-protein|Name=NO29G01690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=863bpback to top Synonyms
Publications
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