NO29G01680, NO29G01680 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO29G01680 vs. NCBI_GenBank
Match: EWM21349.1 (DNA-binding SAP [Nannochloropsis gaditana]) HSP 1 Score: 204.5 bits (519), Expect = 9.300e-49 Identity = 136/321 (42.37%), Postives = 160/321 (49.84%), Query Frame = 0 Query: 271 ALAVPDPKNPRSATLRVDGFIRPFRLTGVKDLLEEKGGGPLVGEHGLWMDAIKTHCYATFESEDSAARARVALYNLTWPERGGVLRADFAPITALQAFEDEKAAXXXXXXXK-------------SLPPMPTPAAVVLXXXXXXXXXXXXXXXXXXKLKVSNTLLPNAVSVEMGVAATPGLIMHPSELRETTGGGMKVQGGGDTSGKRADSFEMATGAARRKRELGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTLEELFRFTTTQPKLYWLPLPEDEVALKRQRLKELKAAEKARGRERDATQKEGAIQRVAD 579 A VP PKNPRSAT+RVDGFIRPFRL K++LEE+GGGPLVGE G+WMD IKTHCYATF+SE+ AARAR+AL+ WPERGGVL ADF+P TA Q E++K + P TP L +VSN+L+P E A P L GG SG G+ RRKRELGP PTLEELFR T+T PKLYW P+PED+VA KR+RLKELKA K ++R+A G Q AD Sbjct: 238 AALVPAPKNPRSATIRVDGFIRPFRLVAAKEMLEERGGGPLVGEDGMWMDVIKTHCYATFQSEECAARARIALHKYQWPERGGVLTADFSPKTAAQVTEEDKLLKKARAASRLQEGGDKTGGARPGEPLAATPRTTALAAASAETQ------------RVSNSLVPPPAPFE----APPHL-------------------GGAESG----------GSVRRKRELGP----SPERIVRARRDAEGAKEAVKEEEDEKPAMPTLEELFRSTSTPPKLYWTPVPEDQVARKRERLKELKAEAKLEAKKREAA--GGVRQPAAD 507
BLAST of NO29G01680 vs. NCBI_GenBank
Match: XP_005853605.1 (apoptotic chromatin condensation inducer in the nucleus, partial [Nannochloropsis gaditana CCMP526] >EKU22753.1 apoptotic chromatin condensation inducer in the nucleus, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 163.7 bits (413), Expect = 1.800e-36 Identity = 73/102 (71.57%), Postives = 85/102 (83.33%), Query Frame = 0 Query: 271 ALAVPDPKNPRSATLRVDGFIRPFRLTGVKDLLEEKGGGPLVGEHGLWMDAIKTHCYATFESEDSAARARVALYNLTWPERGGVLRADFAPITALQAFEDEK 373 A VP PKNPRSAT+RVDGFIRPFRL K++LEE+GGGPLVGE G+WMD IKTHCYATF+SE+ AARAR+AL+ WPERGGVL ADF+P TA Q E++K Sbjct: 238 AALVPAPKNPRSATIRVDGFIRPFRLVAAKEMLEERGGGPLVGEDGMWMDVIKTHCYATFQSEECAARARIALHKYQWPERGGVLTADFSPKTAAQVTEEDK 339
BLAST of NO29G01680 vs. NCBI_GenBank
Match: CBJ25459.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 95.9 bits (237), Expect = 4.700e-16 Identity = 79/272 (29.04%), Postives = 110/272 (40.44%), Query Frame = 0 Query: 284 TLRVDGFIRPFRLTGVKDLLEEKGGGPLVGEHGLWMDAIKTHCYATFESEDSAARARVALYNLTWPERG-GVLRADFAPITALQAFEDEKAAXXXXXXXKSLPPMPTPAAVVLXXXXXXXXXXXXXXXXXXKLKVSNTLLPNAVSVEMGVAATPGLIMHPSELRETTGGG--MKVQGGGDTSGKRADSFEMATGAARRKRELGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTLEELFRFTTTQPKLYWLPLPEDEVALKRQRLKE 553 T+RVD F+RPF K LLEEK P++ E G WMD IKTHCYATF+ +++A RA AL L WP + L A ++A E+ +A + P M PA V L T A S G G H ++ GG +V+G G AA + E+G L+++FR T +P LYWLPL E+EV L++++++E Sbjct: 366 TIRVDNFVRPFTAQQAKKLLEEKAEAPVM-EGGFWMDGIKTHCYATFDGKEAAERAMAALQGLQWPAQSFKRLEATLGDMSA----EEARARDGSKRSNRPFPGMDRPARV---------------------LGPRVTPTAEAKSSPEGGGQANGSGAHATDESSAVAGGSTARVRGRGSVQAPGVAGSRGGVLAANVEAEVGRSRGQDRGGLQQPQQGPEEEAEPI-----------ILDDMFRKTDAKPSLYWLPLSEEEVGLRKKKMEE 600
BLAST of NO29G01680 vs. NCBI_GenBank
Match: XP_008607648.1 (hypothetical protein SDRG_03783 [Saprolegnia diclina VS20] >EQC38824.1 hypothetical protein SDRG_03783 [Saprolegnia diclina VS20]) HSP 1 Score: 87.8 bits (216), Expect = 1.300e-13 Identity = 41/94 (43.62%), Postives = 55/94 (58.51%), Query Frame = 0 Query: 272 LAVPDPKNPRSATLRVDGFIRPFRLTGVKDLLEEKGGGPLVGEHGLWMDAIKTHCYATFESEDSAARARVALYNLTWP-ERGGVLRADFAPITA 365 ++VP KNP S TLR+D F+RPF L V L++ G V +HG W+D IKTHCY TF + + A R L+ + WP G L D++ TA Sbjct: 165 MSVPPAKNPLSCTLRIDNFVRPFTLPAVHALVQ--ADGSFVEDHGFWIDGIKTHCYVTFATPEIATATRQRLHGVVWPAHHGKTLSVDYSASTA 256
BLAST of NO29G01680 vs. NCBI_GenBank
Match: XP_008607649.1 (hypothetical protein, variant [Saprolegnia diclina VS20] >EQC38825.1 hypothetical protein, variant [Saprolegnia diclina VS20]) HSP 1 Score: 87.8 bits (216), Expect = 1.300e-13 Identity = 41/94 (43.62%), Postives = 55/94 (58.51%), Query Frame = 0 Query: 272 LAVPDPKNPRSATLRVDGFIRPFRLTGVKDLLEEKGGGPLVGEHGLWMDAIKTHCYATFESEDSAARARVALYNLTWP-ERGGVLRADFAPITA 365 ++VP KNP S TLR+D F+RPF L V L++ G V +HG W+D IKTHCY TF + + A R L+ + WP G L D++ TA Sbjct: 163 MSVPPAKNPLSCTLRIDNFVRPFTLPAVHALVQ--ADGSFVEDHGFWIDGIKTHCYVTFATPEIATATRQRLHGVVWPAHHGKTLSVDYSASTA 254
BLAST of NO29G01680 vs. NCBI_GenBank
Match: XP_020697677.1 (actin cytoskeleton-regulatory complex protein PAN1 [Dendrobium catenatum] >PKU73839.1 hypothetical protein MA16_Dca011986 [Dendrobium catenatum]) HSP 1 Score: 87.8 bits (216), Expect = 1.300e-13 Identity = 41/87 (47.13%), Postives = 54/87 (62.07%), Query Frame = 0 Query: 274 VPDPKNPRSATLRVDGFIRPFRLTGVKDLLEEKGGGPLVGEHGLWMDAIKTHCYATFESEDSAARARVALYNLTWPERGG-VLRADF 360 VP PK P + +LR+D F+RPF L V++LL + G WMD IKTHCY T+ S + AA R A+YN+ WP GG +L A+F Sbjct: 639 VPTPKKPATTSLRIDNFLRPFTLKAVQELLAQTG-----NVCDFWMDHIKTHCYVTYSSVEEAAETRKAVYNIQWPPNGGRLLAAEF 720
BLAST of NO29G01680 vs. NCBI_GenBank
Match: XP_008875997.1 (hypothetical protein H310_11196 [Aphanomyces invadans] >ETV95296.1 hypothetical protein H310_11196 [Aphanomyces invadans]) HSP 1 Score: 86.3 bits (212), Expect = 3.700e-13 Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 0 Query: 273 AVPDPKNPRSATLRVDGFIRPFRLTGVKDLLEEKGGGPLVGEHGLWMDAIKTHCYATFESEDSAARARVALYNLTWPERGG-VLRADFAPITAL 366 A+PD + T+R+D FIRPF L VK ++E+ E+G WMDAIKTHCY T+ + D+A AR +Y TWPE G L +F+ TA+ Sbjct: 150 AIPDSMIAPTPTIRIDNFIRPFTLNAVKAFVQEEAA---FVENGFWMDAIKTHCYVTYATTDAAIAARGRIYGTTWPELSGRRLTVEFSAETAM 240
BLAST of NO29G01680 vs. NCBI_GenBank
Match: XP_024396615.1 (apoptotic chromatin condensation inducer in the nucleus-like [Physcomitrella patens] >XP_024396616.1 apoptotic chromatin condensation inducer in the nucleus-like [Physcomitrella patens] >XP_024396617.1 apoptotic chromatin condensation inducer in the nucleus-like [Physcomitrella patens] >XP_024396618.1 apoptotic chromatin condensation inducer in the nucleus-like [Physcomitrella patens] >PNR39790.1 hypothetical protein PHYPA_020070 [Physcomitrella patens]) HSP 1 Score: 84.7 bits (208), Expect = 1.100e-12 Identity = 44/103 (42.72%), Postives = 60/103 (58.25%), Query Frame = 0 Query: 274 VPDPKNPRSATLRVDGFIRPFRLTGVKDLLEEKGGGPLVGEHGLWMDAIKTHCYATFESEDSAARARVALYNLTWPERGG-VLRADFAPITALQAFED-EKAA 375 VP P + +L++D F+RPF VK+LL + G +WMD IKTHCY T+ S + A R ALYNL WP +GG +L A+F + ++ D EKAA Sbjct: 498 VPPSAKPATTSLKIDKFLRPFTFKAVKELLAQTG-----TVEDVWMDQIKTHCYVTYSSVEEATATRNALYNLQWPPQGGRLLTAEFVDPSEVKVRSDGEKAA 595
BLAST of NO29G01680 vs. NCBI_GenBank
Match: XP_006827011.1 (apoptotic chromatin condensation inducer in the nucleus isoform X1 [Amborella trichopoda] >ERM94248.1 hypothetical protein AMTR_s00010p00217580 [Amborella trichopoda]) HSP 1 Score: 84.7 bits (208), Expect = 1.100e-12 Identity = 42/87 (48.28%), Postives = 52/87 (59.77%), Query Frame = 0 Query: 274 VPDPKNPRSATLRVDGFIRPFRLTGVKDLLEEKGGGPLVGEHGLWMDAIKTHCYATFESEDSAARARVALYNLTWPERGG-VLRADF 360 VP + P + +LR+D F+RPF L V++LL + G WMD IKTHCY T+ SED A R ALYNL WP GG L A+F Sbjct: 552 VPPSEKPATTSLRIDQFLRPFTLKAVQELLAKTG-----TVSKFWMDHIKTHCYVTYSSEDEAMATRNALYNLQWPSNGGRCLTAEF 633
BLAST of NO29G01680 vs. NCBI_GenBank
Match: XP_011621565.1 (apoptotic chromatin condensation inducer in the nucleus isoform X2 [Amborella trichopoda]) HSP 1 Score: 84.7 bits (208), Expect = 1.100e-12 Identity = 42/87 (48.28%), Postives = 52/87 (59.77%), Query Frame = 0 Query: 274 VPDPKNPRSATLRVDGFIRPFRLTGVKDLLEEKGGGPLVGEHGLWMDAIKTHCYATFESEDSAARARVALYNLTWPERGG-VLRADF 360 VP + P + +LR+D F+RPF L V++LL + G WMD IKTHCY T+ SED A R ALYNL WP GG L A+F Sbjct: 551 VPPSEKPATTSLRIDQFLRPFTLKAVQELLAKTG-----TVSKFWMDHIKTHCYVTYSSEDEAMATRNALYNLQWPSNGGRCLTAEF 632 The following BLAST results are available for this feature:
BLAST of NO29G01680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G01680 ID=NO29G01680|Name=NO29G01680|organism=Nannochloropsis oceanica|type=gene|length=1857bpback to top protein sequence of NO29G01680.1 >NO29G01680.1-protein ID=NO29G01680.1-protein|Name=NO29G01680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=619bpback to top Synonyms
Publications
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