NO29G01530, NO29G01530 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO29G01530 vs. NCBI_GenBank
Match: EWM21333.1 (hypothetical protein Naga_100075g22 [Nannochloropsis gaditana]) HSP 1 Score: 337.8 bits (865), Expect = 2.800e-89 Identity = 154/191 (80.63%), Postives = 177/191 (92.67%), Query Frame = 0 Query: 57 TLDSSMPWDLSVVIKKEGYADIQADLRLRFVAEPGYEPPQGRIFVERDQRALIDTDDKGFALTPSPAWTLSEDKDDRQWGLWIWGLFAEPLFPYLYMTLPVLDECLADVVGEDGEKRKEMRPVFGGTGIPGRRLDFRFNHVREDGATVLSEGKVTFKEVEMQKVDPLGIGGLVNVGDIKEAGEAQLRPVLV 248 +L S++PWDLSVVIKKEGY+DIQAD R+RFV EPGYEPPQGRIFVERD ALIDTD+KGFAL P+PAWTLSEDK+DRQWGLWIWGLF EPLFPYLY +LPVLD+CL + V E+GE+RKE+RPVFGGTGIPG RL+FRFNHVR+DGA LSEG++TFKEVEM+KVDPLGIGG+VNVGD+K+AGEAQLRPVL+ Sbjct: 60 SLSSNVPWDLSVVIKKEGYSDIQADFRIRFVTEPGYEPPQGRIFVERDPLALIDTDEKGFALGPAPAWTLSEDKNDRQWGLWIWGLFDEPLFPYLYFSLPVLDDCLTE-VDEEGERRKELRPVFGGTGIPGNRLNFRFNHVRQDGAVSLSEGQLTFKEVEMRKVDPLGIGGVVNVGDVKDAGEAQLRPVLI 249
BLAST of NO29G01530 vs. NCBI_GenBank
Match: GAX29581.1 (hypothetical protein FisN_24Lh038 [Fistulifera solaris]) HSP 1 Score: 97.8 bits (242), Expect = 4.900e-17 Identity = 68/240 (28.33%), Postives = 110/240 (45.83%), Query Frame = 0 Query: 16 YLCIFLCTHAFVVPLTTNFRPLRTSLPAAPSSSPSTGIKKPTLDSSMPWDLSVVIKKEGYADIQAD--------LRLRFVAEPGYEPPQGRIFVERDQRALIDTDDKGFALT---PSPAWTLSEDKDDRQWGLWIWGLFAEPLFPYLYMTLPVLDECLADVVGEDGEKRKEMRPVFGGTGIPGRRLDFRFNHVREDGATVLSEGKVTFKEVEMQKVDPLGIGGLVNVGDIKEAGEAQLRP 245 + I +C+ +V L+T + P + ++ PTL + W++ +V++ G Q + +FV + GYEPPQG + + L +T + T W LSED +DR+ GLW+WGLF EPL+P+L +TL D L + G D +P +L + NH RE+G +L + ++ +E + DPLG V++ D G L+P Sbjct: 10 FFSILICSSLLLVTLSTTISAFVVAPPRSAHTTRWLAATAPTLTEATTWNVRLVMR--GLISAQGSKLDPLLYTIETQFVEDQGYEPPQGTL------KMLSNTKNSTTTTTIPIVKSRWILSEDPNDRKDGLWVWGLFKEPLYPFLLLTLQTDDIPLPNNNGTD--------------FVPAMQLYAQINHRREEGKVILEGKDLCWRRMETVRADPLG-AATVDLYDNVVVGTIALQP 226
BLAST of NO29G01530 vs. NCBI_GenBank
Match: XP_002506074.1 (predicted protein [Micromonas commoda] >ACO67332.1 predicted protein [Micromonas commoda]) HSP 1 Score: 94.7 bits (234), Expect = 4.200e-16 Identity = 58/161 (36.02%), Postives = 80/161 (49.69%), Query Frame = 0 Query: 82 LRLRFVAEPGYEPPQGRIFVERDQRALIDTDDKGFALTPSPAWTLSEDKDDRQWGLWIWGLFAEPLFPYLYMTLPVLDECLADVVGEDGEKRKEMRPVFGGTGIPGRRLDFRFNHVR-EDGATVLSEGKVTFKEVEMQKVDPLGIGGLVNVGDIKEAGEAQ 242 +R RFV + GYEPPQG I +E DQ + F WTL+ED ++R+ GLWIWGLF EPL+PY+ ++ +C V E GG IP +L H R VLS+GK++FK + K D +G+ +G+ G Q Sbjct: 82 VRARFVVDEGYEPPQGSIEIEDDQ-------ELAFVQAGFHRWTLAEDPNERKAGLWIWGLFEEPLYPYMLLSF----DCNRIEVAE------------GGYHIPKGKLFAEVKHARGSKSGHVLSDGKLSFKVTKTYKADLVGLSE-ATIGEPTMCGRLQ 218
BLAST of NO29G01530 vs. NCBI_GenBank
Match: CBN76715.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 92.4 bits (228), Expect = 2.100e-15 Identity = 65/196 (33.16%), Postives = 91/196 (46.43%), Query Frame = 0 Query: 56 PTLDSSMPWDLSVVIKK-----EGYADIQADLRLRFVAEPGYEPPQGRIFVERDQRALIDTDDKGFALTPSPAWTLSEDKDDRQWGLWIWGLFAEPLFPYLYMTLPVLDECLADVVGEDGEKRKEMRPVFGGTGIPGRRLDFRFNHVREDG-ATVLSEGKVTFKEVEMQKVDPLGIGGLVNVGDIKEAGEAQLRPV 246 PTL S W + + +K E + +R+RF E +EPPQG + V D T G A WTLSE +D R GLW+WGLF +PL+P+L + + L+ P+ GG I RL + +H R+D L G V K VE +VDPLG+ ++ ++ G Q RPV Sbjct: 90 PTLSGSTQWRMFLSLKDPTLGGEAGDTTEVAVRVRFDEERDFEPPQGSLEVIEDNPYF--TQQAGKA-----RWTLSEAEDTRGAGLWVWGLFKDPLYPFLLLQVNNLE-----------------IPLKGGAKIAPGRLYVKVDHRRDDELGPTLKSGTVGVKIVERVRVDPLGMAE-ADITNVVPCGSVQFRPV 260
BLAST of NO29G01530 vs. NCBI_GenBank
Match: XP_003062875.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH52814.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 87.4 bits (215), Expect = 6.700e-14 Identity = 66/215 (30.70%), Postives = 97/215 (45.12%), Query Frame = 0 Query: 56 PTLDSSMPWDLSVV----IKKEGYADIQADLRLRFVAEPGYEPPQGRI-FVERDQRALIDTDDKGFAL---------------------TPSPAWTL-SEDKDDRQWGLWIWGLFAEPLFPYLYMTLPVLDECLADVVGEDGEKRKEMRPVFGGTGIPGRRLDFRFNHVR-EDGATVLSEGKVTFKEVEMQKVDPLGIGGLVNVGDIKEAGEAQL 243 P+LD+S W L + + D D R FV + GYEPPQG + VE D +D + L P+P L S+D ++R+ GLWIWGLF EPL+PY+ ++ V R E+R GG +P +L H R VLS+G+++FK + + D +G+ V+VG+ E G +L Sbjct: 51 PSLDASSTWRLRLELFSGVGASSEPDRVVDARCVFVVDEGYEPPQGVVQIVEDDDGVFVDGGLHRWTLEELVCDIVSSESPSSRVVAFVPPTPHSPLPSQDPNERKAGLWIWGLFEEPLYPYMLLSFDV--------------NRVEVRE--GGYHVPAGKLFGEMRHARGSKSGHVLSDGRLSFKVTKTYQADLVGL-SKVSVGEPTECGRVRL 248
BLAST of NO29G01530 vs. NCBI_GenBank
Match: XP_005768446.1 (hypothetical protein EMIHUDRAFT_211059 [Emiliania huxleyi CCMP1516] >EOD16017.1 hypothetical protein EMIHUDRAFT_211059 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 84.7 bits (208), Expect = 4.300e-13 Identity = 53/151 (35.10%), Postives = 71/151 (47.02%), Query Frame = 0 Query: 84 LRFVAEPGYEPPQGRIFVERDQRALIDTDDKGFALTPSPA-WTLSEDKDDRQWGLWIWGLFAEPLFPYLYMTLPVLDECLADVVGEDGEKRKEMRPVFGGTGIPGRRLDFRFNHVREDGATVLSEGKVTFKEVEMQKVDPLGIGGLVNVGD 234 +RF E GYEPPQG++ V+ + L PA W+LSED +DR+ LWIWGLF++PL+P+L L + G IP L F+ +H R+DGA L EG VT+K V LV + D Sbjct: 74 VRFAEEEGYEPPQGKLSVDS------CLPEGSLRLGEQPAQWSLSEDPEDRKDSLWIWGLFSDPLYPFLLFQLDL---------------------AAPGVCIPAGPLYFQVDHRRKDGAVQLGEGDVTYKARRTHAVSEQLQADLVGLSD 197
BLAST of NO29G01530 vs. NCBI_GenBank
Match: EJK53411.1 (hypothetical protein THAOC_27162 [Thalassiosira oceanica]) HSP 1 Score: 81.3 bits (199), Expect = 4.800e-12 Identity = 70/253 (27.67%), Postives = 109/253 (43.08%), Query Frame = 0 Query: 7 STVARVLLAYLCIFLCTHAFVVPLTTNFRPLRTSLPAAPSS--SPSTGIKKPTLDSSMPWDLSVV---IKKEGYADIQADLRL---RFVAEPGYEPPQGRIFVERDQRALIDTD----DKGFALTPSPAWTLSEDKDDRQWGLWIWGLFAEPLFPYLYMTLPVLDECLADVVGEDGEKRKEMRPVFGGTGIPGRRLDFRFNHVR-EDGATVLSEGKVTFKEVEMQKVDPLGIGGLVNVGDIKEAGEAQLRPVL 247 S+ + +L L + HAF P T + S AA +S T + TL W L ++ + A + L + F+ E GYEPPQG FV ++R+ D D S W LSED DD + GLWIWGLF EPL+P++ + + L + E+ + IP +L + NH R ED L + + +E ++ G V++ + + G+ +P+L Sbjct: 2 SSPSAAILLLLALVASVHAFTAPNTA-----KRSKNAATTSLFMSETATARTTLTDETTWRLRLLLNDVTSSKGAKLDGKLFVIEGSFIEEEGYEPPQG-TFVANERRSSSGEDLSESDTTILKVKSSRWKLSEDPDDPKDGLWIWGLFKEPLYPFMLLQIETEKLTLPSGIDEEAD------------SIPPLKLFAQINHARKEDVGVELQAANLNVRILEQIQLP----GASVDLYEEEPVGQISFQPLL 232
BLAST of NO29G01530 vs. NCBI_GenBank
Match: GAX12464.1 (hypothetical protein FisN_24Hh038 [Fistulifera solaris]) HSP 1 Score: 79.7 bits (195), Expect = 1.400e-11 Identity = 46/147 (31.29%), Postives = 73/147 (49.66%), Query Frame = 0 Query: 98 RIFVERDQRALIDTDDKGFALTPSPAWTLSEDKDDRQWGLWIWGLFAEPLFPYLYMTLPVLDECLADVVGEDGEKRKEMRPVFGGTGIPGRRLDFRFNHVREDGATVLSEGKVTFKEVEMQKVDPLGIGGLVNVGDIKEAGEAQLRP 245 R+ + D I + + + S W LSED +DR+ GLW+WGLF EPL+P+L +TL D L + G D +P +L + NH R++G +L + ++++E + DPLG V++ D G L+P Sbjct: 62 RLVMRGDIENAIKHEKQHDKINNSSRWILSEDPNDRKDGLWVWGLFKEPLYPFLLLTLQTDDIPLPNNNGTD--------------FVPAMQLYAQVNHRRDEGKVILEGKDLCWRQMETVRADPLG-AATVDLYDNVVVGTIALQP 193
BLAST of NO29G01530 vs. NCBI_GenBank
Match: OEU07892.1 (hypothetical protein FRACYDRAFT_271884 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 78.2 bits (191), Expect = 4.000e-11 Identity = 55/202 (27.23%), Postives = 86/202 (42.57%), Query Frame = 0 Query: 57 TLDSSMPWDLSVVI--------KKEGYADIQADLRLRFVAEPGYEPPQG----------------RIFVERDQRALIDTDDKGFA---LTPSPAWTLSEDKDDRQWGLWIWGLFAEPLFPYLYMTLPVLDECLADVVGEDGEKRKEMRPVFGGTGIPGRRLDFRFNHVREDGATVLSE--GKVTFKEVEMQKVDPLGIGGLV 230 TL W+ + + KK G I A ++ +F+ EPGYEPPQG + ++ ++DT S WTLSED +DR+ LWIWGLF EPL+P+L + + D + G + ++P +L + NH R + V+ + + +E E K DP G ++ Sbjct: 3 TLTEETTWNFRMALSNLPTEKGKKAGVDGIFA-IQAKFIEEPGYEPPQGIIQQIFEVASSSEEVVEVETTPEEDGVVDTSSLPTTTQMTIKSGRWTLSEDPNDRKDSLWIWGLFKEPLYPFLLLNFEI------DRISLPGGEDDSIKPF---------QLYAQVNHKRGENGEVMLDLVSDINIREKESFKADPFGAANVL 188
BLAST of NO29G01530 vs. NCBI_GenBank
Match: XP_002296078.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >ACI64795.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 73.9 bits (180), Expect = 7.600e-10 Identity = 45/163 (27.61%), Postives = 79/163 (48.47%), Query Frame = 0 Query: 86 FVAEPGYEPPQG--RIFVERDQRALIDTDDKGFALTPSPAWTLSEDKDDRQWGLWIWGLFAEPLFPYLYMTLPVLDECLADVVGEDGEKRKEMRPVFGGTGIPGRRLDFRFNHVR-EDGATVLSEGKVTFKEVEMQKVDPLGIGGLVNVGDIKEAGEAQLRPV 246 F+ E GYEPPQG R F + D+ WTLSED +D++ GLWIWGLF EPL+P++ + + + L + + R++++ IP +L + H+R E+ L + + +E ++ G V++ + + G+ +P+ Sbjct: 62 FIEEEGYEPPQGLFRPFAKERVEGGTGKDNAMVLEVIRSRWTLSEDPNDKKDGLWIWGLFKEPLYPFMLLQIETKELELPSGTQQAQDGREDIK----SDTIPPLKLYAQVTHIRNEEVGVELKTANLNVRVLEKIQLP----GASVDLYEEERVGQVSFQPL 216 The following BLAST results are available for this feature:
BLAST of NO29G01530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 11
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G01530 ID=NO29G01530|Name=NO29G01530|organism=Nannochloropsis oceanica|type=gene|length=744bpback to top protein sequence of NO29G01530.1 >NO29G01530.1-protein ID=NO29G01530.1-protein|Name=NO29G01530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=248bpback to top Synonyms
Publications
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