NO29G01520, NO29G01520 (gene) Nannochloropsis oceanica

Overview
NameNO29G01520
Unique NameNO29G01520
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1634
Alignment locationchr29:480598..482231 +

Link to JBrowse

Properties
Property NameValue
Description1-aminocyclopropane-1-carboxylate deaminase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:480598..482231 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036052Trypto_synt_PLP_dependent
Homology
BLAST of NO29G01520 vs. NCBI_GenBank
Match: EWM21350.1 (1-aminocyclopropane-1-carboxylate deaminase [Nannochloropsis gaditana])

HSP 1 Score: 380.6 bits (976), Expect = 8.000e-102
Identity = 227/469 (48.40%), Postives = 284/469 (60.55%), Query Frame = 0
Query:   80 LGLLVCLSGGTASMAKAAPAFATFTTLASRQRINVPASSSVLMRRSSSLLLPLQLQPSPVEVLNVMFDDDSQKMCVFVKRDDKLDLMGAGIYGNKARKLWALASS-SSSSSAPFPSVCVSWGGPQSNALLALAGLVCGVWEKKLVYYTKSIPEWLKARPLGNYQRALELGVDFRELPAAEYRALFSTESXXXXXXXXXXXXXXXXXXXXXXXTMTLTVSLKDLLISQEDGSNEERGEEGHDVLLVPQGAAFQGAEEGLRLLAVEIKDWWGLEKSKMEAGMANGASLAVVLPAGTGTTALYLAKHLRRMARENGQGNGEIMVYAVPCVGDGEYLKSQMARLSSS----------------GGREGG------------NMEEEDYVPHVLEGSVPHVFGKPEHGLLVIWQELKEEHGLELDLLYGPHAWRAMRENWGVLAARHRSVLYIHTGGMEGLASQLARYRRLGML 520
            +G+ +C+S  TA  A+   +        S   I +P +S+ L+ R++   LP  L  SPVE ++ +FDD    + V+VKRDDKLDL+GAGI+GNKARKLW LASS   SSS PFP+VC+SWGG QSNAL ALAG VCGV +K+L+YYTK+IP WLK  P+GNY+RALELGVDFREL A+E++ +F                                + LK  L+ +E    +    E  D+LLVPQGAAF GAEEG+  L  E++DWW  E    E   A    LAVVLPAGTGTTA YLA+ L      +  G   + VYAVPCVGDG YL++QMARL+ S                GGR+GG                +   P VLEGS PHVFG+P   L+ +W E+ E+HGLELDLLYGP AW  +R++W VL A+H  +LYIHTGGMEGL SQLARYR   ML
Sbjct:    8 VGVNMCVSLVTAFHARPGASHRFQRVSLSNLHIPLPLASAALIERAT---LPSYLHSSPVEEIHGIFDD---HLKVYVKRDDKLDLLGAGIHGNKARKLWGLASSYPLSSSRPFPAVCLSWGGIQSNALAALAGFVCGVQQKRLIYYTKTIPAWLKDHPVGNYRRALELGVDFRELRASEFQDIFGATDETEGGDGE-----------------ARCIRLKKRLVERE---GDLLAREADDLLLVPQGAAFPGAEEGIDRLGREVEDWWATESGSGE--RAEVKPLAVVLPAGTGTTAFYLARTL----ASSSLGRTPV-VYAVPCVGDGTYLRAQMARLTRSEALSETPARPEGRGVLGGRKGGKPGADHGSEGWREKAPQGAFPEVLEGSAPHVFGQPGQALIDMWHEMGEKHGLELDLLYGPRAWCVIRQHWSVLRAKHDKLLYIHTGGMEGLPSQLARYRYRKML 443          
BLAST of NO29G01520 vs. NCBI_GenBank
Match: XP_005787870.1 (hypothetical protein EMIHUDRAFT_201543 [Emiliania huxleyi CCMP1516] >EOD35441.1 hypothetical protein EMIHUDRAFT_201543 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 200.7 bits (509), Expect = 1.100e-47
Identity = 142/394 (36.04%), Postives = 196/394 (49.75%), Query Frame = 0
Query:  133 QLQPSPVEVLNVMFDDDSQKMCVFVKRDDKLDLMGAGIYGNKARKLWALASSSSSSSAPFPSVCVSWGGPQSNALLALAGLVCGVWEKKLVYYTKSIPEWLKARPLGNYQRALELGVDFRELPAAEYRALFSTESXXXXXXXXXXXXXXXXXXXXXXXTMTLTVSLKDLLISQEDGSNEERGEEGHDVLLVPQGAAFQGAEEGLRLLAVEIKDWWGLEKSKMEAGMANGASLAVVLPAGTGTTALYLAKHLRRMARENGQGNGEIMVYAVPCVGDGEYLKSQMARLS-SSGGREGGNMEEEDYVPHVL--EGSVPHVFGKPEHGLLVIWQELKEEHGLELDLLYGPHAWRAMRENWGVLAARHR------SVLYIHTGGMEGLASQLARYRRLG 518
            QL  SP+E  ++      +   + VKRDD+L L G+G+ GNKARKL AL + S     P PS+  S+GG QSNA+ ALA  V      + +Y+TK +P WL A P GN +RAL LG++  EL  AEY +LF                                                       + L +PQG A   AE G+  LA E+++WW     +++          +V+PAGTGTTAL+LA+HL +           + V+AVPCVGDG+Y+++QM  L   +GG  G N +    +P  L   G   H FG  +   L +WQE     GL++DLLY PHA R +   +  L +  R      + LY+HTGG+EG+ SQL RYRR G
Sbjct:   13 QLAASPIEAFSL------RGTQLLVKRDDRLAL-GSGVSGNKARKLLALEAMS-----PGPSLIGSFGGHQSNAMAALAA-VADAHGARFLYFTKPLPRWLAAAPSGNLERALSLGMELVELADAEYASLFGAGGGVLPAVAPRPPAALLPP----------------------------------EALWLPQGGAAALAEPGVATLAREVREWWQPRSGRLD----------LVVPAGTGTTALFLARHLSQ--------TSAVTVWAVPCVGDGDYIEAQMLALDRCTGGAVGTNRKA---LPRTLAMPGGAAHHFGALDGEELAMWQEAARA-GLDVDLLYAPHALRVL---FDTLLSHERAGEGDATTLYLHTGGLEGVESQLRRYRRAG 334          
BLAST of NO29G01520 vs. NCBI_GenBank
Match: XP_005792686.1 (hypothetical protein EMIHUDRAFT_471383 [Emiliania huxleyi CCMP1516] >EOD40257.1 hypothetical protein EMIHUDRAFT_471383 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 200.7 bits (509), Expect = 1.100e-47
Identity = 142/394 (36.04%), Postives = 196/394 (49.75%), Query Frame = 0
Query:  133 QLQPSPVEVLNVMFDDDSQKMCVFVKRDDKLDLMGAGIYGNKARKLWALASSSSSSSAPFPSVCVSWGGPQSNALLALAGLVCGVWEKKLVYYTKSIPEWLKARPLGNYQRALELGVDFRELPAAEYRALFSTESXXXXXXXXXXXXXXXXXXXXXXXTMTLTVSLKDLLISQEDGSNEERGEEGHDVLLVPQGAAFQGAEEGLRLLAVEIKDWWGLEKSKMEAGMANGASLAVVLPAGTGTTALYLAKHLRRMARENGQGNGEIMVYAVPCVGDGEYLKSQMARLS-SSGGREGGNMEEEDYVPHVL--EGSVPHVFGKPEHGLLVIWQELKEEHGLELDLLYGPHAWRAMRENWGVLAARHR------SVLYIHTGGMEGLASQLARYRRLG 518
            QL  SP+E  ++      +   + VKRDD+L L G+G+ GNKARKL AL + S     P PS+  S+GG QSNA+ ALA  V      + +Y+TK +P WL A P GN +RAL LG++  EL  AEY +LF                                                       + L +PQG A   AE G+  LA E+++WW     +++          +V+PAGTGTTAL+LA+HL +           + V+AVPCVGDG+Y+++QM  L   +GG  G N +    +P  L   G   H FG  +   L +WQE     GL++DLLY PHA R +   +  L +  R      + LY+HTGG+EG+ SQL RYRR G
Sbjct:   13 QLAASPIEAFSL------RGTQLLVKRDDRLAL-GSGVSGNKARKLLALEAMS-----PGPSLIGSFGGHQSNAMAALAA-VADAHGARFLYFTKPLPRWLAAAPSGNLERALSLGMELVELADAEYASLFGAGGGVLPAVAPRPPAALLPP----------------------------------EALWLPQGGAAALAEPGVATLAREVREWWQPRSGRLD----------LVVPAGTGTTALFLARHLSQ--------TSAVTVWAVPCVGDGDYIEAQMLALDRCTGGAVGTNRKA---LPRTLAMPGGAAHHFGALDGEELAMWQEAARA-GLDVDLLYAPHALRVL---FDTLLSHERAGEGDATTLYLHTGGLEGVESQLRRYRRAG 334          
BLAST of NO29G01520 vs. NCBI_GenBank
Match: CEM33219.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 188.0 bits (476), Expect = 7.600e-44
Identity = 142/418 (33.97%), Postives = 192/418 (45.93%), Query Frame = 0
Query:  132 LQLQPSPVEVLNVMFDDDSQKMCVFVKRDDKLDLMGAGIYGNKARKLWALASS--SSSSSAPFPSVCVSWGGPQSNALLALAGLVCGVWEK----KLVYYTKSIPEWLKARPLGNYQRALELGVDFRELPAAEYRALFSTESXXXXXXXXXXXXXXXXXXXXXXXTMTLTVSLKDLLISQEDGSNEERGEEGHDVLLVPQGAAFQGAEEGLRLLAVEIKDWWGLEKSKMEAGMANGASLAVVLPAGTGTTALYLAKHLRRMARENGQGNGEIMVYAVPCVGDGEYLKSQMARLSSSGGREGGNMEEEDYVPHVLEGSVPHVFGKPEHGLLVIWQELKEEHGLELDLLYGPHAWRAMRENW-------------------------GVLAARHRSVLYIHTGGMEGLASQLARYRRLGM 519
            L   PSP++ +N        +M V VKRDD L L  + I GNKARK  AL      S SS   P V VS GG QSNAL AL+ LV    E+    +L+YY K IP WL+ RP+G +  ALE GV+FR L  AEY   F  ++                           + SL   L+ QE+           DVL +PQG A   AEEG+ LLA E+        +++ + +   A+  +VLP GTG+TAL+LA+H++R          ++ V  VP VGD  Y+  QM+RL    G  G       +    +  + P VFG+P  G   +W+EL    G++ DL+Y    W  +RE W                         G      R  + +H GG EG  S LAR R  G+
Sbjct:   26 LHPSPSPLQEINAF-----GQMGVMVKRDDLLHLHPSDINGNKARKFLALHRRLFDSDSSTSAPRVIVSHGGVQSNALRALSALVRTYNERGGSCRLLYYCKKIPSWLRERPVGTFAAALEQGVEFRPLANAEYAKHFGGDAG--------------------------SPSLPQTLMPQEE-----------DVLFIPQGGACGSAEEGVALLAEEL-------LTQLPSLLPPAAAATIVLPGGTGSTALFLARHMQR--------RKDVEVVVVPVVGDWAYMARQMSRLDHLTGGHG------VFPSIAVPSTPPSVFGEPTQGNFQLWRELVSSTGIDFDLMYSVPMWGVLREAWEGARGSVMCWDGGAGEWAGRRWPIGGGAEREERMCVVLHCGGAEGNVSWLARARYKGL 380          
BLAST of NO29G01520 vs. NCBI_GenBank
Match: XP_002186162.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65632.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 177.6 bits (449), Expect = 1.000e-40
Identity = 135/419 (32.22%), Postives = 199/419 (47.49%), Query Frame = 0
Query:  135 QPSPVEVLNVMFDDDSQKMCVFVKRDDKLDLMGAGIYGNKARKLWALASSSSSSSAPFPSVCVSWGGPQSNALLALAGLV------CGVWEK------KLVYYTKSIPEWLKARPLGNYQRALELGVDFRELPAAEYRALFSTESXXXXXXXXXXXXXXXXXXXXXXXTMTLTVSLKDLLISQEDGSNEERGEEGHDVLLVPQGAAFQGAEEGLRLLAVEIKDWWGLEKSKMEAGMANGASLAVVLPAGTGTTALYLAKHLRRM-ARENGQGNGEIMVYAVPCVGDGEYLKSQMARLSSSGGREGGNMEEEDYVPHVLEGSVPH---------VFGKPEHGLLVIWQELKEEHGLELDLLYGPHAWRAMRENW-------GVLAAR----HRSVLYIHTGGMEGLASQLARYRRLGMLK 521
            QPS V+V  +      Q   V+VKRDD L L G+ I GNKARK+ AL     ++   FP   VS+GGPQSNA++ALA +V       G+ +       + +YYTK +P++L+ +P GN  RA  LG++  ELP  EYR LF  +                           LT  +                    D L +PQG +   A  G RLLA EI ++W L+         NG  L+V +P GT +TA+ +   +  + ++ +     +I V  +PC+GD  Y + QM  L++  G    ++      P   + +  H          FG+PE  +L  +  +KE+  + LDLLYG  AW  +  +W        V  A      RSV+Y+H+GG+EG+ +QL RYR  G+LK
Sbjct:   56 QPSSVDVTVI------QDRLVYVKRDDHLRLQGSQIAGNKARKMLAL-----NNLKDFPLCVVSYGGPQSNAMVALAAVVNFQNIKQGIDDHHDPHRCRFIYYTKKLPKFLRNQPTGNLFRAKMLGIEMIELPPEEYRTLFGGK-----------------WGANTHAPQGLTPPVPG------------------DSLWIPQGGSSGMAHAGTRLLAQEICEFWSLK--------GNGRPLSVAIPGGTCSTAVLVHTAIESLQSKLSNDKQMDIKVVVIPCIGDDTYARRQMMALNTQLGNASNDL-PTILKPSPFDLATQHNHKHSDKYFTFGEPEKDILETFVYIKEKCDITLDLLYGAPAWAVLLRHWKGKQTSPSVFDANAPFADRSVMYVHSGGIEGVNTQLLRYRYKGLLK 419          
BLAST of NO29G01520 vs. NCBI_GenBank
Match: GAX09940.1 (hypothetical protein FisN_11Lh072 [Fistulifera solaris])

HSP 1 Score: 170.2 bits (430), Expect = 1.600e-38
Identity = 130/418 (31.10%), Postives = 194/418 (46.41%), Query Frame = 0
Query:  136 PSPVEVLNVMFDDDSQKMCVFVKRDDKLDLMGAGIYGNKARKLWALASSSSSSSAPFPSVCVSWGGPQSNALLALAGLV--------CGVWEKKLVYYTKSIPEWLKARPLGNYQRALELGVDFRELPAAEYRALFSTESXXXXXXXXXXXXXXXXXXXXXXXTMTLTVSLKDLLISQEDGSNEERGEEGHDVLLVPQGAAFQGAEEGLRLLAVEIKDWWGLEKSKMEAGMANGASLAVVLPAGTGTTALYLAKHLRRMARE-NGQGNGEIMVYAVPCVGDGEYLKSQMARLSSSGGREGGNMEEEDYVPHVLEGSVPHV-------------FGKPEHGLLVIWQELKEEHGLELDLLYGPHAWRAMRENWGV----LAARH--------RSVLYIHTGGMEGLASQLARYRRLGML 520
            PSPV+ + +      +   V++KRDD+L L G+ + GNKARK+  L          FP   VS+GGPQSNA+LALA +V            +K+ VYYTK +P +L+++P GN  RAL LG++  E+   +Y  LF                                    D   S E   N      G  +  +PQG A   A  G +LLA EI  +W             G  L V +P GT +TA+ L   +R +  E   +G  ++ V  +PCVGD  Y + QMA L S   + G N      +P +L     ++             FG P+  +L +++E+ +E G++LDLLYG  AW  +  +W       ++ H        R ++Y+H+GG+EG+ SQL RY   G++
Sbjct:   99 PSPVDQVWI------RDRPVYIKRDDQLRLPGSQLSGNKARKMLTLTCMQD-----FPDCIVSYGGPQSNAMLALAAVVHFQNQKINYADNKKRFVYYTKKLPRFLRSQPNGNLFRALLLGMELVEVSVQDYNDLFG----------------------------------GDFGGSPEPPKNLPPPIPGKSI-WIPQGGACGVAVAGAKLLAEEIISYW--------RDNGRGRPLTVAVPGGTCSTAVLLYNAIRSLQNEQTDEGKLDVKVLVIPCVGDDGYARRQMASLLSQTRQTGTNDGVLCELPEILPPYPENMSGLGRSNTEQYVTFGTPDASVLDVYREINDECGVQLDLLYGASAWTVLLRHWRSELLWESSEHPTSANFQGRQLMYVHSGGLEGINSQLLRYHYKGLV 462          
BLAST of NO29G01520 vs. NCBI_GenBank
Match: XP_002287303.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94746.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 165.6 bits (418), Expect = 4.000e-37
Identity = 140/472 (29.66%), Postives = 198/472 (41.95%), Query Frame = 0
Query:  136 PSPVEVLNVMFDDDSQKMCVFVKRDDKLDLMGAGIYGNKARKLWALASSSSSSSAPFPSVCVSWGGPQSNALLALAGLVCG----------------------------VWE---------------------------------------------KKLVYYTKSIPEWLKARPLGNYQRALELGVDFRELPAAEYRALFSTESXXXXXXXXXXXXXXXXXXXXXXXTMTLTVSLKDLLISQEDGSNEERGEEGHDVLLVPQGAAFQGAEEGLRLLAVEIKDWWGLEKSKMEAGMANGASLAVVLPAGTGTTALYLAKHLRRMARENGQGNGEIMVYAVPCVGDGEYLKSQMARLSSS-GGREGGNMEEEDYV----PHVLEGSVPH------VFGKPEHGLLVIWQELKEEHGLELDLLYGPHAWRAMRENWGV----LAARHRSVLYIHTGGMEGLASQLARYRRLGML 520
            PSPVE L +      +   V++K D+ L L  + + GNKARK ++L   ++  +  FP   VS+GGPQSNA+LALA +V                               WE                                             K+ +Y+TKS+P +LK  P GN  RAL LG++ R L   EY  LF                                      +++  D      G+     L VPQG A   A  G  LLA EI D+W +           G  LAV LPAGT TTAL L + ++ +  +   G  +I +  +PCVGD EY + QM  L  + GGR  G +++  ++      V  GS          FG+P   +L  + E+ E  GL LDLLYG  +W  + ++W           R V+Y+H+GG+EG+ASQL RY+  G+L
Sbjct:   29 PSPVERLLI------RDRLVYIKHDEYLHLPSSNLSGNKARKFYSL---NNIPAGEFPDAVVSYGGPQSNAMLALAAIVSSKNWELGSKGDSNRNSNAIENNESQGKDPFWELDVLEEDIRIRALETDLIEVEDDITNTPSNQPKQSTPVASSSQPKKRFIYFTKSMPRYLKKYPNGNLLRALALGMEIRTLSHGEYNRLFGGLHGGS-------------------------------VMAPADLDPPIPGKS----LWVPQGGACSVATPGSNLLAKEIVDYWKVN--------GKGMPLAVCLPAGTCTTALLLHRSIQHLMEQQKTGTMDIRIVVIPCVGDDEYARRQMMSLDKAVGGR--GKLKDLPWILRPRSDVEYGSARRRSGGYFRFGEPAKAILQAFDEMNEA-GLFLDLLYGAPSWSLLLQHWRSRDEDCPIADRQVMYVHSGGLEGIASQLTRYKHKGLL 445          
BLAST of NO29G01520 vs. NCBI_GenBank
Match: SFP04679.1 (1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase, PLP-dependent ACC family [Hydrogenimonas thermophila])

HSP 1 Score: 163.7 bits (413), Expect = 1.500e-36
Identity = 120/364 (32.97%), Postives = 169/364 (46.43%), Query Frame = 0
Query:  156 FVKRDDKLDLMGAGIYGNKARKLWALASSSSSSSAPFPSVCVSWGGPQSNALLALAGLVCGVWEKKLVYYTKSIPEWLKARPLGNYQRALELGVDFRELPAAEYRALFSTESXXXXXXXXXXXXXXXXXXXXXXXTMTLTVSLKDLLISQEDGSNEERGEEGHDVLLVPQGAAFQGAEEGLRLLAVEIKDWWGLEKSKMEAGMANGASLAVVLPAGTGTTALYLAKHLRRMARENGQGNGEIMVYAVPCVGDGEYLKSQMARLSSSGGREGGNMEEEDYVPHVLEGSVPHVFGKPEHGLLVIWQELKEEHGLELDLLYGPHAWRAMRENWGVLAARHRSVLYIHTGGMEGLASQLARYRRLGML 520
            FVKRD+ +DL      GNK RKL+ L  +         S  +S+GG QSNA+L++A L C +   + +YY K +P+WLK  P GN + ALELG+   E+P  E+                                               D  N  R     D + VPQG A + A+EG+R+LA EI  W      K E G+    S +V  P+GTGTTALYL ++L +          EI V   P VGD + L SQ   L   G          + +P +L     H F KP+   L +W  LK+  G+E DL+Y P  W  + +++  L    + +LY+H+GG+ G  SQ+ +YR  G L
Sbjct:   12 FVKRDELIDLR---FSGNKLRKLYPLLQTDPKEF----STLISFGGAQSNAMLSIAYL-CDLKGWEFIYYVKKMPKWLKDAPSGNLKLALELGMKIVEIPHLEF----------------------------------------------YDHINRVRSNISEDAVFVPQGGACKLAKEGVRILAEEILSW------KRENGI---DSFSVATPSGTGTTALYLRQYLPK----------EISVVTTPVVGDRDTLISQWKSLEPDG----------ENLPEILGNLPKHPFAKPKKEYLDVWASLKDA-GIEFDLVYAPKMWLELLDSYNTL---KKPILYVHSGGVIGNISQIEQYRYKGFL 288          
BLAST of NO29G01520 vs. NCBI_GenBank
Match: WP_092911150.1 (hypothetical protein [Hydrogenimonas thermophila])

HSP 1 Score: 163.7 bits (413), Expect = 1.500e-36
Identity = 120/364 (32.97%), Postives = 169/364 (46.43%), Query Frame = 0
Query:  156 FVKRDDKLDLMGAGIYGNKARKLWALASSSSSSSAPFPSVCVSWGGPQSNALLALAGLVCGVWEKKLVYYTKSIPEWLKARPLGNYQRALELGVDFRELPAAEYRALFSTESXXXXXXXXXXXXXXXXXXXXXXXTMTLTVSLKDLLISQEDGSNEERGEEGHDVLLVPQGAAFQGAEEGLRLLAVEIKDWWGLEKSKMEAGMANGASLAVVLPAGTGTTALYLAKHLRRMARENGQGNGEIMVYAVPCVGDGEYLKSQMARLSSSGGREGGNMEEEDYVPHVLEGSVPHVFGKPEHGLLVIWQELKEEHGLELDLLYGPHAWRAMRENWGVLAARHRSVLYIHTGGMEGLASQLARYRRLGML 520
            FVKRD+ +DL      GNK RKL+ L  +         S  +S+GG QSNA+L++A L C +   + +YY K +P+WLK  P GN + ALELG+   E+P  E+                                               D  N  R     D + VPQG A + A+EG+R+LA EI  W      K E G+    S +V  P+GTGTTALYL ++L +          EI V   P VGD + L SQ   L   G          + +P +L     H F KP+   L +W  LK+  G+E DL+Y P  W  + +++  L    + +LY+H+GG+ G  SQ+ +YR  G L
Sbjct:   19 FVKRDELIDLR---FSGNKLRKLYPLLQTDPKEF----STLISFGGAQSNAMLSIAYL-CDLKGWEFIYYVKKMPKWLKDAPSGNLKLALELGMKIVEIPHLEF----------------------------------------------YDHINRVRSNISEDAVFVPQGGACKLAKEGVRILAEEILSW------KRENGI---DSFSVATPSGTGTTALYLRQYLPK----------EISVVTTPVVGDRDTLISQWKSLEPDG----------ENLPEILGNLPKHPFAKPKKEYLDVWASLKDA-GIEFDLVYAPKMWLELLDSYNTL---KKPILYVHSGGVIGNISQIEQYRYKGFL 295          
BLAST of NO29G01520 vs. NCBI_GenBank
Match: GAX14467.1 (hypothetical protein FisN_11Hh072 [Fistulifera solaris])

HSP 1 Score: 161.0 bits (406), Expect = 1.000e-35
Identity = 128/412 (31.07%), Postives = 191/412 (46.36%), Query Frame = 0
Query:  136 PSPVEVLNVMFDDDSQKMCVFVKRDDKLDLMGAGIYGNKARKLWALASSSSSSSAPFPSVCVSWGGPQSNALLALAGLV--------CGVWEKKLVYYTKSIPEWLKARPLGNYQRALELGVDFRELPAAEYRALFSTESXXXXXXXXXXXXXXXXXXXXXXXTMTLTVSLKDLLISQEDGSNEERGEEGHDVLLVPQGAAFQGAEEGLRLLAVEIKDWWGLEKSKMEAGMANGASLAVVLPAGTGTTALYLAKHLRRMARENGQGNG--EIMVYAVPCVGDGEYLKSQMARLSSSGGREGGNMEE-------------EDYVPHVLEGSVPHV-FGKPEHGLLVIWQELKEEHGLELDLLYGPHAWRAMRENWGVLAA------------RHRSVLYIHTGGMEGLASQLA 512
            PSPV+ + +      +   V++KRDD+L L G+ + GNKARK+  L          FP   VS+GGPQSNA+LALA +V            +K+ VYYTK +P +L+++P GN  RAL LG++  E+   +Y  LF                                    D   S E   N      G  +  +PQG A   A  G +LLA EI  +W             G  L V +P GT +TA+ L   +R +  EN   +   +I V  +PCVGD  Y + QMA L S   R+ G +++             ED        +  +V FG P+  +L +++E+K+E G +LDLLYG  AW  +  +W   +             + R ++Y+H+GG+EG+ SQ++
Sbjct:   76 PSPVDQVWI------RDRPVYIKRDDQLRLPGSQLSGNKARKMLTLTCLQD-----FPECIVSYGGPQSNAMLALAAVVHFQNQKMNNADNKKRFVYYTKKLPRFLRSQPNGNLFRALLLGMELVEVSVQDYNDLFG----------------------------------GDFGGSPEPPKNLPPPIPGKSI-WIPQGGACGVAVAGAKLLAEEIISYW--------RDHGRGRPLTVAVPGGTCSTAVLLHNAVRSLQSENTTADKQLDIQVLVIPCVGDDGYARRQMASLLSQ-IRQTGTIDDVLCDLPEILPPYPEDLSGRGRSNTEQYVTFGTPDASVLDVYREIKDECGFQLDLLYGASAWTVLLRHWRSESLWESSEHPTSANFQGRQLMYVHSGGLEGINSQVS 432          
The following BLAST results are available for this feature:
BLAST of NO29G01520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21350.18.000e-10248.401-aminocyclopropane-1-carboxylate deaminase [Nanno... [more]
XP_005787870.11.100e-4736.04hypothetical protein EMIHUDRAFT_201543 [Emiliania ... [more]
XP_005792686.11.100e-4736.04hypothetical protein EMIHUDRAFT_471383 [Emiliania ... [more]
CEM33219.17.600e-4433.97unnamed protein product [Vitrella brassicaformis C... [more]
XP_002186162.11.000e-4032.22predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX09940.11.600e-3831.10hypothetical protein FisN_11Lh072 [Fistulifera sol... [more]
XP_002287303.14.000e-3729.66predicted protein [Thalassiosira pseudonana CCMP13... [more]
SFP04679.11.500e-3632.971-aminocyclopropane-1-carboxylate deaminase/D-cyst... [more]
WP_092911150.11.500e-3632.97hypothetical protein [Hydrogenimonas thermophila][more]
GAX14467.11.000e-3531.07hypothetical protein FisN_11Hh072 [Fistulifera sol... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL062nonsL062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR079ngnoR079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005267NSK005267Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G01520.1NO29G01520.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|532268gene_8330Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100075g23gene9070Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G01520.1NO29G01520.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G01520 ID=NO29G01520|Name=NO29G01520|organism=Nannochloropsis oceanica|type=gene|length=1634bp
ATGAGGGGACATTTGTCCATTCTATATTGGTATCGTGCTCTTTTGGAGGC
CACTCAATTTTTCTTACCACCTTTCTCTTCGGCCTACACCTCACACACAG
TCTACAGGCAAGCGGGCCAGGGGCCCTGCAACCTTGGAGAGGCGGAGAAC
GGCACACACGGTCTCGCAACGCAACAGCAAACGCAACAATCGCCAGCAAC
CTCAACCGGGCCAGGTACTGGTATGCGCCTGTTCCTCTTGGGCCTCCTCG
TTTGTCTGAGCGGTGGAACTGCCAGCATGGCCAAGGCCGCTCCCGCCTTT
GCAACCTTCACGACGCTTGCCTCGCGGCAAAGAATAAATGTGCCGGCCAG
CTCGTCAGTCCTCATGCGCCGGAGCAGCAGCCTCCTCCTACCTCTCCAGC
TTCAGCCTTCCCCTGTCGAGGTGCTCAATGTCATGTTTGACGATGACTCC
CAGAAAATGTGCGTGTTTGTTAAAAGGGATGATAAGCTGGACTTAATGGG
TGCCGGCATTTACGGTAACAAAGCACGCAAACTCTGGGCCTTGGCTTCTT
CTTCCTCCTCTTCCTCCGCCCCGTTTCCGTCAGTGTGCGTTAGCTGGGGA
GGGCCCCAAAGCAACGCACTCTTGGCACTGGCAGGCTTGGTGTGTGGGGT
GTGGGAAAAGAAGTTGGTGTACTACACTAAAAGCATTCCGGAATGGCTGA
AAGCCCGGCCCTTGGGCAACTACCAAAGGGCGCTTGAGTTGGGCGTGGAT
TTCCGGGAGCTACCCGCGGCCGAGTATCGAGCCCTCTTCAGCACTGAGAG
TGAAGGGGGAGGAGGGGGAGCAAGAAGAGGAGCAGTAGAGAGAAGAGAAG
GCGGAGGAGGAAAAGAAAGAACGATGACGCTGACGGTGTCCCTGAAAGAT
TTGCTTATTAGTCAGGAGGATGGCTCCAATGAAGAGAGGGGGGAAGAAGG
CCATGATGTCCTGCTTGTCCCTCAAGGGGCAGCGTTCCAAGGCGCGGAGG
AGGGGCTGCGGCTTCTGGCGGTCGAGATAAAGGACTGGTGGGGATTGGAG
AAGAGCAAGATGGAGGCTGGGATGGCAAACGGCGCCTCTCTCGCGGTCGT
GCTCCCGGCGGGCACAGGGACCACGGCTTTGTACCTGGCGAAGCACTTGC
GGAGAATGGCGAGGGAGAATGGACAGGGGAATGGGGAGATAATGGTATAT
GCGGTGCCCTGTGTGGGAGACGGCGAGTACTTGAAGTCCCAAATGGCTCG
TCTGTCGTCATCAGGAGGAAGGGAGGGAGGGAACATGGAAGAAGAGGATT
ACGTCCCTCATGTACTGGAAGGCTCCGTACCCCACGTGTTTGGCAAGCCC
GAGCACGGCCTTTTAGTCATATGGCAGGAACTAAAAGAGGAGCACGGTCT
GGAGCTGGACCTGCTATATGGACCTCATGCTTGGCGGGCGATGAGGGAGA
ACTGGGGGGTCCTGGCCGCGAGGCATCGGTCCGTGTTGTACATCCACACG
GGGGGCATGGAGGGGCTGGCTAGTCAGCTGGCACGGTACCGGCGTTTGGG
GATGCTTAAATGAGTAGGCAAGTGTATGATTTGTAACATCTCTTTAATTT
AATGGAAAGAAAAGGCGTTAGATAAATAAATGGA
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protein sequence of NO29G01520.1

>NO29G01520.1-protein ID=NO29G01520.1-protein|Name=NO29G01520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=521bp
MRGHLSILYWYRALLEATQFFLPPFSSAYTSHTVYRQAGQGPCNLGEAEN
GTHGLATQQQTQQSPATSTGPGTGMRLFLLGLLVCLSGGTASMAKAAPAF
ATFTTLASRQRINVPASSSVLMRRSSSLLLPLQLQPSPVEVLNVMFDDDS
QKMCVFVKRDDKLDLMGAGIYGNKARKLWALASSSSSSSAPFPSVCVSWG
GPQSNALLALAGLVCGVWEKKLVYYTKSIPEWLKARPLGNYQRALELGVD
FRELPAAEYRALFSTESEGGGGGARRGAVERREGGGGKERTMTLTVSLKD
LLISQEDGSNEERGEEGHDVLLVPQGAAFQGAEEGLRLLAVEIKDWWGLE
KSKMEAGMANGASLAVVLPAGTGTTALYLAKHLRRMARENGQGNGEIMVY
AVPCVGDGEYLKSQMARLSSSGGREGGNMEEEDYVPHVLEGSVPHVFGKP
EHGLLVIWQELKEEHGLELDLLYGPHAWRAMRENWGVLAARHRSVLYIHT
GGMEGLASQLARYRRLGMLK*
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Synonyms
Publications