NO29G01500, NO29G01500 (gene) Nannochloropsis oceanica

Overview
NameNO29G01500
Unique NameNO29G01500
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3266
Alignment locationchr29:476159..479424 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:476159..479424 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR032710NTF2-like_dom_sf
Homology
BLAST of NO29G01500 vs. NCBI_GenBank
Match: GAX22994.1 (hypothetical protein FisN_15Hh109 [Fistulifera solaris])

HSP 1 Score: 236.1 bits (601), Expect = 3.300e-58
Identity = 137/356 (38.48%), Postives = 198/356 (55.62%), Query Frame = 0
Query:   78 AKQWVQSGCGLEDPSLMADD-FKFLDP-LRGTQSKKAYLAGLEKLDLQSAFPDLDLRAHDFRVDRDDPTKVWFTTRVLGTHKYPLTLGGEEIAPTGIKMQLPPE--SNCVNIVGGKVVRAVGGGIVLDRSVGNSRGLGGVYGVAAALGRPVSAFKHTPPQKVFQDFFGRTFKPSTEAPPVFSPLPEAVMVGLAKGLLASDFGAADPGLLAKDFKFVGPLVGPLPRDTFVKAFSSFNLRRAFPDINNEAYDFRVDPYDPARVWFTVKSQGTFTGAFGEGRNSLPPNGGKYRSGPEGISVTFNAQGQCVKLTVGVLMDPEEGDTGGLGGVFGVLFAVGTPLPPFVTRPFPQHLRHWKN 430
            AK+   S  GL DPSL+ D+ F+++ P +     K  YLA     DL++AFPDL+ RAHDFRVD DD T V  T R+ GT +  L L    ++PTG  M  PPE  S   ++  GK+++ +  G  +DR VGN++G  GV   A   G+P+S +   PP  V + FFGR  KP  E     +P PE VM+ LAKG++ S+  + DP LLA+ F ++ P +GP+ +  F++ ++    +  F D++    ++RVDPYDP RVW  +K                 P G  Y+  P+ +S TF+  G C ++T G ++DP  G+ GGLGG  G+ +A G    P  TRP P+ L   KN
Sbjct:   81 AKRVFNSDLGLLDPSLLDDERFQWVSPTVDKPLDKTDYLAAGRFFDLRAAFPDLNYRAHDFRVDEDDAT-VRCTCRITGTMRGSLRLRDVILSPTGKTMICPPEGFSMTFDLESGKLIK-LCTGFAMDRLVGNTQGTTGVVAAAITGGQPISDWDIYPPATVLKRFFGRPVKPLPEVSNFLAPFPETVMIQLAKGIIGSNMASVDPSLLAQSFTYMTPSLGPIGKKEFLENYA----KEEFQDVDPRISNYRVDPYDPERVWVDLK-----------------PVGAGYQGAPQAMSFTFDGDGFCTRITAGAVLDPTIGNGGGLGGPEGLKYARGQASNPLTTRPLPRLLARMKN 413          
BLAST of NO29G01500 vs. NCBI_GenBank
Match: GAX23391.1 (hypothetical protein FisN_15Lh109 [Fistulifera solaris])

HSP 1 Score: 234.2 bits (596), Expect = 1.200e-57
Identity = 141/376 (37.50%), Postives = 206/376 (54.79%), Query Frame = 0
Query:   57 ATAGNGRATVSQTAGLANIQVAKQWVQSGCGLEDPSLMADD-FKFLDP-LRGTQSKKAYLAGLEKLDLQSAFPDLDLRAHDFRVDRDDPTKVWFTTRVLGTHKYPLTLGGEEIAPTGIKMQLPPE--SNCVNIVGGKVVRAVGGGIVLDRSVGNSRGLGGVYGVAAALGRPVSAFKHTPPQKVFQDFFGRTFKPSTEAPPVFSPLPEAVMVGLAKGLLASDFGAADPGLLAKDFKFVGPLVGPLPRDTFVKAFSSFNLRRAFPDINNEAYDFRVDPYDPARVWFTVKSQGTFTGAFGEGRNSLPPNGGKYRSGPEGISVTFNAQGQCVKLTVGVLMDPEEGDTGGLGGVFGVLFAVGTPLPPFVTRPFPQHLRHWK 429
            +TA +     S   GL  +  AK+ + S  GL DPSL+ D+ F+++ P +     K  YLA     DL++AFPDL+ RAHDFR+D DD   V  T R+ GT +  L L    ++PTG  M  PPE  S   ++  GK+V+ +  G  +DR VGN++G  GV   A   G+P+S +   PP  V + FFGR  KP  E     +P PE VM+ LAKG++ S+  + DP LLA+ F ++ P +GP+ ++ F++ F+    +  F D++    ++RVDPYDP RVW  +K                 P G  Y+  P+ +S TF+  G C ++T G ++DP  G+ GGLGG  G+ +A G    P  TRP P+ L   K
Sbjct:   62 STASSPVTFTSTPEGL--VLQAKRVLNSDLGLLDPSLLDDEKFQWVSPTVDKPLDKTDYLAAGRFFDLRAAFPDLNYRAHDFRIDIDDDATVRCTCRITGTMRGALRLRDVILSPTGKTMICPPEGFSMTFDLESGKLVK-LCTGFAMDRLVGNTQGTTGVVAAAITGGQPISDWDIYPPATVLKRFFGRPVKPLPEVSNFLAPFPETVMIQLAKGIIGSNMASVDPSLLAQSFTYMTPSLGPIGKEEFLENFA----KEEFQDVDPRISNYRVDPYDPERVWVDLK-----------------PVGTGYQGTPQAMSFTFDGDGFCTRITAGAVLDPTIGNGGGLGGPEGLKYARGQASNPLTTRPLPRLLARIK 413          
BLAST of NO29G01500 vs. NCBI_GenBank
Match: XP_002179040.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49738.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 220.7 bits (561), Expect = 1.400e-53
Identity = 127/352 (36.08%), Postives = 182/352 (51.70%), Query Frame = 0
Query:   87 GLEDPSLMAD-DFKFLDP-LRGTQSKKAYLAGLEKLDLQSAFPDLDLRAHDFRVDRDDPTKVWFTTRVLGTHKYPLTLGGEEIAPTGIKMQLPPESNCVNIVGGKVVRAVGGGIVLDRSVGNSRGLGGVYGVAAALGRPVSAFKHTPPQKVFQDFFGRTFKPSTEAPPVFSPLPEAVMVGLAKGLLASDFGAADPGLLAKDFKFVGPLVGPLPRDTFVKAFSSFNLRRAFPDINNEAYDFRVDPYDPARVWFTVKSQGTFTGAFGEGRNSLPPNGGKYRSGPEGISVTFNAQGQCVKLTVGVLMDPEEGDTGGLGGVFGVLFAVGTPLPPFVTRPFPQHLRHWKNYVIDVIT 437
            GL+DPSL+ D +FK + P L     K  Y+A     DL+  FPDLD RAHDFR+D  DP  V  T RV GT +  L L    + PT I M  PPE+  +       V  +  G  +DR VGN++G  GV   A   G+P S ++  P   V + FFGR   P  E   + +P PE VMV LAKG+L S+ G  DP LL+ DF +  P + P+ + +F+  +++      F +I+     FR+DPY+P RVW  VK                 P+   Y   P+  S TF+ +G C ++T   ++DP  G+ GGLGG  G  +A+       +TRP P+ +  ++  ++  IT
Sbjct:   99 GLQDPSLLDDQEFKCISPGLDQPLGKTDYIAAGRFFDLRGTFPDLDYRAHDFRIDETDPKTVRLTCRVTGTMRGELRLRTANLPPTNIVMFCPPEAVSMTFNDQGKVTKLCMGFCMDRQVGNTQGTTGVQAAATIAGQPPSNWELYPGLSVVKRFFGRPVTPIVENNAILAPFPETVMVQLAKGVLGSNMGLEDPTLLSNDFAYSTPFIAPVSKFSFLSNYAA----EEFANIDPSLSHFRIDPYNPTRVWVDVK-----------------PSAPGYEGAPQSYSFTFDDEGFCTRVTARYVLDPSIGNGGGLGGPDGYKYALNDAPSDLLTRPLPEAVGRFRKKILSPIT 429          
BLAST of NO29G01500 vs. NCBI_GenBank
Match: XP_005779577.1 (hypothetical protein EMIHUDRAFT_205097 [Emiliania huxleyi CCMP1516] >EOD27148.1 hypothetical protein EMIHUDRAFT_205097 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 214.9 bits (546), Expect = 7.800e-52
Identity = 123/327 (37.61%), Postives = 170/327 (51.99%), Query Frame = 0
Query:   94 MADDFKFLDPLRGTQSKKAYLAGLEKLDLQSAFPDLDLRAHDFRVDRDDPTKVWFTTRVLGTHKYPLTLGG--EEIAPTGIKMQLPPESNCVNIVGGKVVRAVGGGIVLDRSVGNSRGLGGVYGVAAALGRPVSAFKHTPP--QKVFQDFFGRTFKPSTEAPPVFSP-------------LPEAVMVGLAKGLLASDFGAADPGLLAKDFKFVGPLVGPLPRDTFVKAFSSFNLRRAFPDINNEAYDFRVDPYDPARVWFTVKSQGTFTGAFGEGRNSLPPNGGKYRSGPEGISVTFNAQGQCVKLTVGVLMDPEEGDTGGLGGVFG 404
            +++DF+F+ PL G   K+A +     LDL++A PD D R HDFR+D DDP +VW T R  GTH   L  GG   E     +  + PPE+  +   G   +R +  G  +DR VG + GLGG++GV   +G P+      PP   +   D  G   +    APP   P             L E  ++ L   LL +D+GA  P LLA  F F GP+VGPL +  F+ ++   NLR AFPD+     D RV P+D  RVW+T    GT +       +S PP G ++ + PE  S  F+ +G+CV LT G +MD   G+T GLGG  G
Sbjct:   52 LSEDFEFVAPLVGPLGKEALIGATASLDLEAAIPDFDARYHDFRIDADDPNRVWCTMRCRGTHTGTLNFGGIQAEAKSPPVAFESPPEAVSLRFDGAGKLREITTGYPMDRRVGTTGGLGGLFGVLEGIGVPL------PPVVTRSCGDLLGPALRLLRLAPPPPEPSLLEVPRLATSDALSEERLLELCAALLETDYGAERPELLADSFTFTGPVVGPLRKAEFLSSYGESNLREAFPDLEYSYRDVRVCPFDVNRVWYTYSRSGTHSATLRLLGSSYPPTGKRWEAPPECGSAQFDTEGRCVALTGGYVMDRRMGNTEGLGGAQG 372          
BLAST of NO29G01500 vs. NCBI_GenBank
Match: CBJ31063.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 214.2 bits (544), Expect = 1.300e-51
Identity = 131/369 (35.50%), Postives = 196/369 (53.12%), Query Frame = 0
Query:   66 VSQTAGLANIQVAKQWVQSGCGLEDPSLMADDFKFLDPLRGTQSKKAYL--AGLEKLDLQSAFPDLDLRAHDFRVDRDDPTKVWFTTRVLGTHKYPLTLGGEEIAPTGIKMQLPPESNCVNIVGGK---VVRAVGGGIVLDRSVGNSRGLGGVYGVAAALGRPVSAFKHTPPQKVFQDFFGRTFKPSTEAPPVFSPLPEAVMVGLAKGLLAS--DFGAADPGLLAKDFKFVGPLVGPLPRDTFVKAFSSFNLRRAFP--DINNEAYDFRVDPYDPARVWFTVKSQGTFTGAFGEGRNSLPPNGGKYRSGPEGISVTFNAQGQCVKLTVGVLMDPEEGDTGGLGGVFGVLFAVGTPLPPFVTRPFPQHLR 426
            VS    +A I  AK  V++  G++   ++  DF+FL    G  ++  YL         L++A PDL   ++D+RVD+ +  +VW TTR+ GTH  PL   G+E  P+GI+++  PE  CV++   +   +   + GG  +DR VGN+   GG++GV  A+G PVSA+K+ PP KV  D  G TF+P        +P  ++V + LAK +L +  D   A   LLA D     P++GPL +   V++ ++ +L   F   D ++  +D RVDP++P+RVW T        GA         P    + S P+  SVTF++ G   K+T+G  MD E GDT GL    G+L  +G PLP    RP P   R
Sbjct:   14 VSADEAIALIDKAKTIVEADMGVKVADMLGPDFRFLWQFNGDMARADYLTEGTGPYATLRTALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVFDGKEYPPSGIRVEAAPE--CVSVTFDEKSGLATKITGGFCIDRGVGNTGPAGGIWGVLQAIGEPVSAWKYFPPVKVLVDVLGPTFRPKGSQGKAKAPYRDSVAIALAKQVLTALRDDTGALADLLADDCMIYAPILGPLKKKEIVQS-ATVDLVDFFSGLDTDDNYHDARVDPFEPSRVWITTIPTTKVVGATTCFGTKFEPKRQSFVSTPQTFSVTFDSDGFASKITLGCPMDTEVGDTEGLTNFQGILAGLGIPLPDPFGRPAPDSFR 379          
BLAST of NO29G01500 vs. NCBI_GenBank
Match: XP_002287111.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED96752.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 203.4 bits (516), Expect = 2.300e-48
Identity = 119/303 (39.27%), Postives = 172/303 (56.77%), Query Frame = 0
Query:  146 VWFTTRVLGTHK-YPLTLGGEEIAPTGIKMQLPPESNCVNIV-----GGKVVRAVGGGIVLDRSVGNSRGLGGVYGVAAALGRPVSAFKHTPPQKVFQDFFGRTFKPSTE---APPVFSPLPEAVMVGLAKGLLASDFGAADPGLLAKDFKFVGPLVGPLPRDTFVKAFSS-FNLRRAFPDINNEAYDFRVDPYDPARVWFTVKSQGTFTGAFGEGRNSLPPN--GGKYRSGPEGISVTFNAQGQCVKLTVGVLMDPEEGDTGGLGGVFGVLFAVGTPLPPFVTRPFPQHLRHWKNYVIDVIT 437
            V FTT   GT +  PL L    I P G  M+ PP S  +         GK+V+ V   +VLDR  GN++GL G+ G A   G P++ ++ +PP      FFGR  K   E         P P++VM+ LAKG+ AS FG  DP LL+ DF ++ PL+GPL ++ +V+ F++ +N+R A PD++ +  ++RVDPYDP RVW   +++GT  G    G  +LP N    K+ S PE +S TF+A G C ++T   ++DP  G+TG LGGV+G+L+A GTP     TR     L   +  ++  IT
Sbjct:   22 VRFTTLTTGTFRGAPLRLRHSTIQPNGKVMKCPPTSISITYATKGRNAGKIVKLV-NDVVLDRQFGNTKGLSGIAGAAICAGVPLNEWELSPPLVAMGKFFGRPMKQIDEQSGGDVGMPPFPDSVMIQLAKGVTASSFGLDDPDLLSIDFTYLEPLMGPLKKEAYVELFTTKYNVRDAVPDLDYQFQNYRVDPYDPFRVWVDTRAKGTRIGPI--GAKALPANIQSAKFESPPECMSFTFDADGYCKRITAASVLDPLLGNTGLLGGVYGILYATGTPEIVLKTRTVDLILNRSQKAILKEIT 321          
BLAST of NO29G01500 vs. NCBI_GenBank
Match: EJK59593.1 (hypothetical protein THAOC_20160 [Thalassiosira oceanica])

HSP 1 Score: 192.6 bits (488), Expect = 4.100e-45
Identity = 130/388 (33.51%), Postives = 191/388 (49.23%), Query Frame = 0
Query:   93 LMADDFKFL------DPLRGTQSKKAYLAGLEKLDLQSAFPDLDLRAHDFR--------------------VDRD-----------------------DPTKVWFTTRVLGTHK-YPLTLGGEEIAPTGIKMQLPPESNCVNIV-----GGKVVRAVGGGIVLDRSVGNSRGLGGVYGVAAALGRPVSAFKHTPP-----QKVFQDFFGRTFKPSTEAPPVFSPLPEAVMVGLAKGLLASDFGAADPGLLAKDFKFVGPLVGPLPRDTFVKAFSSFNLRRAFPDINNEAYDFRVDPYDPARVWFTVKSQGTFTGAFGEGRNSLPPN--GGKYRSGPEGISVTFNAQGQCVKLTVGVLMDPEEGDTGGLGGVFGVLFAVGTPLPPFVTR 419
            L++D F ++      D   G  ++  YLA     D++ +FPDLD RA+DFR                    VD+D                           V FTTR +G+ K   L L  + + P G  M+ PP S  V         GKV + V   +V+DR  GN+RG+ G+   A   G   S+F  TPP     + +FQ    +     +       P P++V++ LA+G++ S+FG  D  LL++DF ++ PL+GPL ++ ++  F  +N+    PD++    +FR+D YDP RVW   ++ GT TG+   G   LPPN    KY S PE IS+TF+  G   +LT G + DP  G+TGGLG V+G+L+A GTP     TR
Sbjct:  252 LLSDSFVWISGNNLADGRTGILNRAEYLAAGRFFDIRRSFPDLDYRAYDFRIVNEGSTDGIEDGETSKKEGVDKDLTPLEKLQAKQREXXXXXXXXXXGEVTVRFTTRTVGSFKGKGLRLRSKVLEPNGRLMKCPPSSVSVTYCTTGPDTGKVTKLV-TDMVMDREFGNTRGVSGLPAAAIVAG-DESSFDATPPLVALERLLFQKKPKQIMDDESVLDSYAPPFPKSVLLQLAEGVVDSNFGLDDSNLLSRDFTYIEPLLGPLSKEQYISQFEEYNVLGGMPDLDYGLEEFRIDQYDPYRVWVDSRATGTRTGSI--GNRPLPPNVESAKYTSPPEAISLTFDDDGFLTRLTAGAVHDPTLGNTGGLGSVYGMLYATGTPENDLKTR 635          
BLAST of NO29G01500 vs. NCBI_GenBank
Match: XP_002508011.1 (predicted protein [Micromonas commoda] >ACO69269.1 predicted protein [Micromonas commoda])

HSP 1 Score: 160.6 bits (405), Expect = 1.700e-35
Identity = 76/171 (44.44%), Postives = 107/171 (62.57%), Query Frame = 0
Query:  256 PLPEAVMVGLAKGLLASDFGAADPGLLAKDFKFVGPLVGPLPRDTFVKAFSSFNLRRAFPDINNEAYDFRVDPYDPARVWFTVKSQGTFTGAFGEGRNSLPPNGGKYRSGPEGISVTFNAQGQCVKLTVGVLMDPEEGDTGGLGGVFGVLFAVGTPLPPFVTRPFPQHLRH 427
            P+    ++   K +LA+  G  +P LLA DFKFV P+VGPLP+D F++AF  F L   FPD N   Y FR+DP++P RVWF  + +GT TG    G  SL   G K  + P+  S+ FN +G+C +LT G +MD + G+TGGLGGVFG+ +A+G  LP    +P+ +  R+
Sbjct:   93 PISPDDLIARTKAILANKNGVENPALLASDFKFVAPVVGPLPKDDFLQAFDGFKLEEGFPDANAGYYAFRIDPFEPNRVWFDTRFRGTNTGPLSGG--SLAATGKKVEAPPQACSMLFNERGECTQLTAGYVMDKQVGNTGGLGGVFGIFYAIGYGLPFPEAQPWKKSKRY 261          
BLAST of NO29G01500 vs. NCBI_GenBank
Match: XP_002507412.1 (predicted protein [Micromonas commoda] >ACO68670.1 predicted protein [Micromonas commoda])

HSP 1 Score: 159.5 bits (402), Expect = 3.900e-35
Identity = 76/171 (44.44%), Postives = 110/171 (64.33%), Query Frame = 0
Query:  256 PLPEAVMVGLAKGLLASDFGAADPGLLAKDFKFVGPLVGPLPRDTFVKAFSSFNLRRAFPDINNEAYDFRVDPYDPARVWFTVKSQGTFTGAFGEGRNSLPPNGGKYRSGPEGISVTFNAQGQCVKLTVGVLMDPEEGDTGGLGGVFGVLFAVGTPLPPFVTRPFPQHLRH 427
            P+P A ++   K +LA + G  DP LLA DFKFV P+VGPL ++ F+ AF SF +   FPD     Y FRVDP++P+RVW+  +  GT TG    G  +LP    K  S P+  S+ FN +G+C +LTVG +MD + G+TGGLGGV+G+L+A+G  LP    +P+ + +++
Sbjct:   88 PIPPADLIAKCKLILAKNNGGEDPSLLASDFKFVAPVVGPLEKERFLAAFQSFKIDEGFPDAKFNYYHFRVDPFEPSRVWYDARFVGTNTGPLIGG--TLPATNKKVESPPQSCSMRFNERGECTQLTVGYVMDKQLGNTGGLGGVYGILYAIGYGLPFPEAQPWQKSVQY 256          
BLAST of NO29G01500 vs. NCBI_GenBank
Match: GAQ79407.1 (hypothetical protein KFL_000300050 [Klebsormidium nitens])

HSP 1 Score: 151.0 bits (380), Expect = 1.400e-32
Identity = 77/174 (44.25%), Postives = 108/174 (62.07%), Query Frame = 0
Query:  254 FSPLPEAVMVGLAKGLLASDFGAADPGLLAKDFKFVGPLVGPLPRDTFVKAFSSFNLRRAFPDINNEAYDFRVDPYDPARVWFTVKSQGTFTGAFGEGRNSLPPNGGKYRSGPEGISVTFNAQGQCVKLTVGVLMDPEEGDTGGLGGVFGVLFAVGTPLPPFVTRPFPQHLRHW 428
            FS  P+  ++ L K +LA + G  DP LLA DFKF  P++  L +  F+KAF+SF L+ AFPD+    Y+F VDPY+P RVWF  +++ T TG    G  ++ P   +  + PE  S+TFN +G+  KLTVG + D   G+TGGLG +FG+L+AVG PLP    RP+     +W
Sbjct:   16 FSIAPDR-LIELTKNVLAKNQGVDDPLLLADDFKFAAPII-YLGKKEFLKAFASFQLKVAFPDVEANFYNFFVDPYEPNRVWFFTRTRATHTGPLKFGARTIKPTYKRVEAAPEVSSMTFNEEGKVTKLTVGYVADRRVGNTGGLGALFGILYAVGHPLPFPEARPYKASWTYW 187          
The following BLAST results are available for this feature:
BLAST of NO29G01500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GAX22994.13.300e-5838.48hypothetical protein FisN_15Hh109 [Fistulifera sol... [more]
GAX23391.11.200e-5737.50hypothetical protein FisN_15Lh109 [Fistulifera sol... [more]
XP_002179040.11.400e-5336.08predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_005779577.17.800e-5237.61hypothetical protein EMIHUDRAFT_205097 [Emiliania ... [more]
CBJ31063.11.300e-5135.50conserved unknown protein [Ectocarpus siliculosus][more]
XP_002287111.12.300e-4839.27predicted protein, partial [Thalassiosira pseudona... [more]
EJK59593.14.100e-4533.51hypothetical protein THAOC_20160 [Thalassiosira oc... [more]
XP_002508011.11.700e-3544.44predicted protein [Micromonas commoda] >ACO69269.1... [more]
XP_002507412.13.900e-3544.44predicted protein [Micromonas commoda] >ACO68670.1... [more]
GAQ79407.11.400e-3244.25hypothetical protein KFL_000300050 [Klebsormidium ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL062nonsL062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR079ngnoR079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005269NSK005269Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G01500.1NO29G01500.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673263gene_8328Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G01500.1NO29G01500.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G01500 ID=NO29G01500|Name=NO29G01500|organism=Nannochloropsis oceanica|type=gene|length=3266bp
TCCGCGGCCTTCACTTATTTGTTTCTTGGTGCAAACGTCAGTCTAGGCTT
TCCCTCATATCGTCAAATCCACGGCTCACGATGTATCCGCGGTACCACAA
AATAAGGATGCTTTCCTTCTTGACCTTCATGGTGACCGCCAATGCTTTTA
CCTTTCCTTCGTTCCTCGACACACCGGCGGAAGGgtaagtgaatgatggc
atgagtaagatggaggtttgggttttccatttgggaagcgcgggtactcg
gcagtggtattagcggtgaagtataaatccaccccatgcgaccgatttaa
caacgacacctaagaggggatccgtgcatattgtcacgtatttttacaat
acacacagGCTTGTGCAGAAACAGTCAGGCGCGGTGGAGGGGGGCAGTAG
GAGAAGTCGTGGCACACTCTTTGCGACGGCCGGGAACGGACGGGCTACAG
TCTCGCAGACGGCCGGCCTGGCCAACATCCAGGTAGCCAAGCAATGGGTA
CAGTCGGGATGTGGCCTAGAGGATCCCAGCCTTATGGCGGACGACTTCAA
GTTTTTAGATCCCTTGCGCGGGACACAAAGTAAGAAGGCTTATTTGGCTG
GCTTGGAGAAGCTTGACTTGCAGTCGGCTTTCCCCGACCTGGATTTGCGG
GCGCACGACTTCCGTGTGGATCGAGACGACCCAACAAAAGTCTGGTTCAC
TACTCGGGTGCTGGGCACGCACAAGTACCCCTTGACACTTGGCGGGGAGG
AGATCGCCCCCACGGGCATTAAGATGCAGCTGCCGCCTGAGAGCAATTGC
GTGAATATCGTGGGGGGCAAGGTTGTGCGGGCGGTGGGTGGAGGGATCGT
TTTGGATCGCTCTGTCGGGAACTCGCGGGGCTTGGGGGGCGTGTACGGTG
TCGCCGCCGCTTTGGGCCGGCCCGTGAGCGCCTTTAAGCACACGCCGCCC
CAGAAGGTGTTCCAGGATTTCTTCGGGCGCACATTCAAGCCCTCAACGGA
GGCGCCCCCCGTTTTCTCCCCCCTCCCCGAGGCGGTCATGGTGGGGCTGG
CCAAGGGCTTGTTAGCGTCTGACTTCGGAGCTGCCGACCCAGGCCTGCTA
GCGAAAGACTTTAAGTTCGTTGGCCCCTTGGTCGGGCCTCTGCCCCGGGA
CACTTTCGTCAAGGCGTTCTCCTCTTTCAACCTCAGGCGTGCTTTCCCCG
ACATCAACAACGAGGCCTACGACTTCCGTGTGGACCCCTATGACCCCGCC
CGGGTCTGGTTCACCGTCAAGTCCCAGGGCACCTTCACGGGGGCATTCGG
GGAGGGCAGGAACTCGTTGCCGCCGAATGGAGGCAAGTACCGGAGTGGCC
CGGAGGGGATCTCGGTGACTTTTAACGCGCAAGGCCAGTGCGTGAAGCTG
ACCGTGGGCGTACTGATGGACCCGGAGGAAGGGGACACAGGGGGCTTGGG
CGGTGTCTTCGGGGTCTTGTTTGCCGTGGGCACGCCATTGCCGCCCTTCG
TAACCAGGCCTTTCCCCCAGCACCTCCGACACTGGAAGAACTACGTCATC
GACGTCATCACCAGCCCCTTCTCCGGCAGCAGCAGCAGCAGCAGCAGCAG
CGACAAGCCTGCAGCAGCAACAGCAGCAGTTAAAGAAGTTTCGGAAGCCC
CGAAGCCCAAGGCGATCGCTGAAGCGCTGAAGAAGTCTGCGGCTCCCCCT
CCTCCTCCCCCTGCCGCCAAGGTCCAGGCCGTCAAACCATTGGTGGCATC
CAAATCCAAGCCCACTCCTCCGGTCGTGAAGAAGGTCACCCCTCCTCCTC
CCTCTCCTCCTCGTTCTCCTGCAGCGAAAAAGGCTGCTCCTCCCGCTGCC
TCAAAGGTGCAGGTCGCTCCTAAACCTGCCGCCACCATCACCACCACCAC
CACCACCAGTAGCAGTAGCAGTAGCAGCAATCCTTTCAGGAGTTTCTTCG
GCGGCGACGAGGCGAAGGCAGTATCCCCCAAACCAGCCGCTAAGCCAGCA
GCTTCTCCAGCCCCTAGAGCTACTGCTAGCGGCAAGGCCTCCGTGTCGAC
CTTCAAGGGCATCCCCTCCAAGCCCACCCCCAAGCCCGCAGTGAAGAAGG
CCACTCCTCCCCCTCCTCCCGTCAAGAAAGCACCAGCACCAGCAGCCGTC
ACAAAGGTAGCAGCACCATCAAAACCCAGCGGTGGCGGATTCAGTCTTTT
CGGTGGGGGCAACAAAAAGGAAGACACCAAGCCGGCGGCCAAGAGCCCTC
CTACTCCTCCTCCTGCCAAGGTGGGGCCCAAGCCGAGCATACAGTCGCAG
TCGAGTCGACCAAAGGTGACGGGGATGGGCAAGAAGAAGTGAGGAAGCAC
TGAGGGAGAGTTTCAGAGAAAATAGGTGAAGTAGGTAGAGGAAGAGGAGG
TTAAAGAGGTAGAGGGGGATGGCCGAGGAATCAGGCAAAGGAGGAGGCGT
GAGGTTGATCATCATTCTTTGTGTTTGTTGTGTATGTAGTGGGTATCTCC
GTGGGTGTGGTGCTGAGAGCATCTCAGCTACACTTCCTCGGCTGCCACCG
CACTTTGTGTATCTACATATATGGAGAAAAGCCGAAAACCAACAGACAAA
GGATGCGGTCTTGTCGGTCTCACTGCCGAGGCAAGCCAGGCGTGGAGAAG
AGGGGGATGAAGGGGAAGGTGATGAGAGAGTGAGGCGGTCGGTTGAGGAG
GGACATCGTAGGTGCTTACCTCTTTTAAGGAGATTCAAGGGAGAGGGCCG
AGCGGGCCAGAGACGGTATCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTTGTTTTGTTTTTTTA
AATATGTTTTGGGTGTGAATTAGCAGTGTGTGCTTTTTGGTCTGGTTGTA
TGGGATGAGTAAGAGGTAGAGTTAGTAAGAGAAAGGAAGGAAGACGAAGG
AGTGGGCTGGCCTCCTGCTCCAGGCAGGCAAGGGCAGGAGACAGAAGAGA
TGGAGAGAAGGGGGGAGGCAGAAAGGGACCGAGGAGGCAGAAAGATGTGA
AGAAAGAGAGCTAGGGGAATATTCTTTTTGAGACACAACCAAAATTTTGC
GAGATGCATGTCCCTCCTTCTCCTTCTACTTCCCCTTCTCCTTTCAGCTT
GACGGAACGGACTGGCTCCTTAGCGAGTCAGATAGGTAGGCTCAGGCTGC
CCTTTAGGTTACGGGCCGCAAGTGGAACAATAACCAACTAAATAAAACGA
AAACAATGCCGAAGAG
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protein sequence of NO29G01500.1

>NO29G01500.1-protein ID=NO29G01500.1-protein|Name=NO29G01500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=696bp
MYPRYHKIRMLSFLTFMVTANAFTFPSFLDTPAEGLVQKQSGAVEGGSRR
SRGTLFATAGNGRATVSQTAGLANIQVAKQWVQSGCGLEDPSLMADDFKF
LDPLRGTQSKKAYLAGLEKLDLQSAFPDLDLRAHDFRVDRDDPTKVWFTT
RVLGTHKYPLTLGGEEIAPTGIKMQLPPESNCVNIVGGKVVRAVGGGIVL
DRSVGNSRGLGGVYGVAAALGRPVSAFKHTPPQKVFQDFFGRTFKPSTEA
PPVFSPLPEAVMVGLAKGLLASDFGAADPGLLAKDFKFVGPLVGPLPRDT
FVKAFSSFNLRRAFPDINNEAYDFRVDPYDPARVWFTVKSQGTFTGAFGE
GRNSLPPNGGKYRSGPEGISVTFNAQGQCVKLTVGVLMDPEEGDTGGLGG
VFGVLFAVGTPLPPFVTRPFPQHLRHWKNYVIDVITSPFSGSSSSSSSSD
KPAAATAAVKEVSEAPKPKAIAEALKKSAAPPPPPPAAKVQAVKPLVASK
SKPTPPVVKKVTPPPPSPPRSPAAKKAAPPAASKVQVAPKPAATITTTTT
TSSSSSSSNPFRSFFGGDEAKAVSPKPAAKPAASPAPRATASGKASVSTF
KGIPSKPTPKPAVKKATPPPPPVKKAPAPAAVTKVAAPSKPSGGGFSLFG
GGNKKEDTKPAAKSPPTPPPAKVGPKPSIQSQSSRPKVTGMGKKK*
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Synonyms
Publications