NO29G01490, NO29G01490 (gene) Nannochloropsis oceanica

Overview
NameNO29G01490
Unique NameNO29G01490
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4722
Alignment locationchr29:471118..475839 -

Link to JBrowse

Properties
Property NameValue
DescriptionZn(2)-C6 fungal-type DNA-binding domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:471118..475839 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO29G01490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL062nonsL062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR079ngnoR079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005270NSK005270Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G01490.1NO29G01490.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G01490.1NO29G01490.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G01490 ID=NO29G01490|Name=NO29G01490|organism=Nannochloropsis oceanica|type=gene|length=4722bp
CTCGGATTTGCCTGGCCCATGAAGCCTTCGCTCTATTCACACTATCTATT
TATGCCCCCACACAAACGCAGTCATGATGCATGTAGAGTCACATTCTTAA
GTATCATCGCTGCGAGGATTCATGACCTGGACGATGGCAAGATTAAGCCC
TACTCTCCCGGTCCCATCAAACCACTCTTCTTTGTCTGGTCGTCGCGCTC
TCGACCATCCAAAAGTGTGTGTTTACTTGGTCTATTTCGGGGTTAGATTT
GCCGGTATTGACATCAAGCCCCGGAAAGGTGAAAGAAACCAGCCAGCGTC
GGTGCGGGAGTGGTTTGCTGAAGGATTCTTGCGGCACGACAGTCATTGCG
GCCCATGTATCACTCGAATGCGATCTCGAGGATCACGCTGAGGCGGATTA
TAGAGGATATGAACAGGATGGAAAGGACGGAAAATTCCAGGAACAGTGTG
ACCCTTGCATTGCTCGGACACTGGCCTGGACCGGAGGCTCTTGTTGGGCC
AAATGGGACATGAGTTAAGATTGTAAGACACAAAAGTCTATTTAAAAGAT
TATGGAAGGAAAACAGTATTATCGATCACTATCAATGTATTTTTTTGGGC
TCACACACATTATTTTTGACTTCACATGTTTTGTTTCTGTAGGGTGCAGC
GTTGGCGAAGCAGGCCAGCACAGTGCAACGTATCGGACACCATGGGGAAG
GACCTCAAGAACATGAACCATCTCGGGGTCTGTGCGACCCTGACAAGTGT
ATGCCTTTTAAAATCTATTTCACCAATTTCCTCTCTTCGCCCTGCGTATA
CACTACCGTGGTTGCAGGTCATGCGGGTATAGTTAGGGCCGGGACAAGGA
AAACAGGTCGAAGCTGAGGACTGCACATGTCTTATGATTTTAACACCTTC
CTTTCTTTATAACCTTTCTTGTCATCATATCTTGGTCGTGTGTGCTTGTT
ATCATATCTTGGTCGTGTGTGCCCGTTGACCGCGTTGTAAAAGGTGTTTT
TCGTGGAAGAAGAGCACGTACTAACTAAGCGAACCAGCGACATGGAGAAC
TTGATCGCTCGTGCTCCGTCATAGGCTCAGTCGTCATCGCCACTGGTGGA
AACGTGCTAGCCCATGTCCTCCATTCAAAGCCCTCTGACTCAACAGTATA
CACGCTTTAAACAGACGATACGTAGAGTACGCAAGAAGTCTCGCTACGCC
TTCTCTCAGTGCTTTGGGTGAGGTTTTCCTCATCAGTTCCGGCTTGCCTA
GTGCAAGATAGGAGCGCGAGAAGAGGAACAAGAAGCAAGCGGCGCAGCGT
CACACGCGAGAGCGGCCTTACCCGGCAGAGGAGGATGTAAAAAATTTCCA
TATTTGCCCATCGCGCCACCTTTCCGCCTCTTGGAAATATAAGCTTTTGA
TATTGTAATCGTTCATGCGACCTCGGGAGGTTTTTCCCCTCCCCTATTGC
CGTCTTGCGTCTTGCAGCCAGTAGAAAGTTTGTCAATGATAACACCGGGG
AACGTCCATTCACAACCTCCACCACATAACACACCACAGGTGTCGTAGGG
TCAGTTCGTCCTCGGGCAGGCGGTGGAAAGGACTGGGAAGCGAGGACCTA
GGGCACAAGGAGGGGGGCGGGAGAAGTAGGATTTCGCAGAGGACGTGTTG
TGCATATAGACGTCTCGTCGCAAAGCTCGCGCCTCATGTACGGACAAAGC
AGCGGTGTGCATCTTCCCTATCACGTGCAGGAGCAGCAACAGCAACAGCA
AGAGCAGGAGCAGTTGTATTCCCAGGTGCCCATCCTGCACTCGCCGCACC
ACAATCAGGACCAGCAGCAGGTTGGTGGGGGTTTGAACGACGGCGCTGTC
TCCACCATTATGACTCCAAGTCCCGCAGCCTCATCCTCCAGCGATCCCAC
GACTGCTGCGACCGCTGTGCCGGCAACTGCCGCAGCCTCAGCTGTTGGGA
AGAAGAGGGTCCGGAAGCTCGGGGGTGCCAAGCAAATCCCCGGTGCCGCC
CTGGGAATGGGAAACCCGCCGGGAGTGGGAATGGATGAGGGAGCAGATGG
TGGGCATGGTCCTGTGGTGTCGGTAGTAGAAAAAAATGCGGAAGTATTGG
CAGCGGCGACGGCAGCGGCAGTGGCAGCACGGCAGCAGCAGTATAAGCAC
CAACAGCAGCTCCTGGGCTCTCAAGTGGCGACTCTGGCCGAGAGCATCTT
TCGGCGGTGGGGTGCAGAGGGCGTGCTGCGGGAAGACGTGGTAACCCGCG
TGCTCCAGCACTGGTTTCTGATGCAGAGTTGCTGGGGCACGGACCGCTCA
CGGGGTCTGCTCGAGAAATTCATGGGCCTGACAGCGCTCTCGGAAGTGGC
TTTGAAAGAGGCCGCGCTGGGCGGGGGGCCGGAGACGCCACTGCAGCGGG
CTACACAGGCGCCCACGCCCTTGCCCCCCGTGCATCCCTTCTTGGCCGTC
CTGGACGACTGGACCTCGGCAGTGGCACTGCATGTGTCGGACATGAAGGA
GGGCGTGGAGCGCGTCACGGCCAACGGCCGCTTCGAGGAGACCTTCATGG
GAGCCAAGGAGGCGCTTGAGCGACTGTGGGGCGAGAAGTTGCCCTTTGCC
TTCCTGCTGGCAGGGTTGGTCGCGCCCGAGGACCGGCAGCGACTGCTAGA
AGAGCTGCTGGCGCTAACATTCCGATCCACCAACGCCCTGGAGGACCGAC
ACATGGTGCTCAAGTGCACGGACAGGCATGGCCTCACCTTCCTCGGCATC
GTCCGCATCCGAACTCACCGGGACCTGGTGCGCCAGTACGACTCCACGAT
CGTGTCCCTTCAGCCCCTGCCGCTGGTCGTACCTCCGTCGCCCTCCTCGG
GGGCTGTCCTGGCCACCTCCACCAACCCCGGCTTCTCCCCCGTTTCCTCC
TCCAGCTCCTCTTCCACCAGGGGCCCGCGCTCCCTTTCGCCGCCCCCGCC
CAAGCCCGTCTTGAGCTGGCGGCCGACGCGCGACGGAGGCCGGTGGCGAT
ACGCGGAGCTGACTCTGGCGCAAGACACGAGCGGGCGTGTGTTGGTGCTA
GAGCGGTGGGGCGGCGGCTTGGTCCGTGGAGACGGATGGGGGCTGCGCAC
GCTCACGACAGGCACGGCGCTGTACGTGGAGGGCTCGCGCGTCTTGGGCG
TGCGTCCGCTTCCAGGCGAGGGGACAGGCGTGCTGAATGCGTCACAACAG
CAGCAGCAACAACAGCAAGCATCCGTGCCGCCCTTGCCGCAGGTGCTGCG
CATCCAGCCGCTTCAGCGCTACACGCCGTCAGCTGTCTCTCCGTCCCTGG
TGGAGGGCAGCAGCGGCGTGACCAAACGCATCTTTACTCAAGCGTCTTCC
GGGGCCTCAACTGCGCCTCTTGCACACAAAAACGAACAGCACCATCAAGC
CCAGCAGCGGCAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGTTCCACCCCCAGGTTCTCTCCAGTCCT
TCACCAAATGCCGCCTCAGCCTCAGCTATGTTCCCCTCTCCTGGAGCCCA
CAACACCTCAGCATTCGGCTCGCCAGTGCTGTCGCAGCATCAGCAGCACC
AGCAGCAGCAAGAGGGCTGCCAGGTGCGGGGCCACCACCAGTCCCCTACA
GCCCTGTACGACCCCCCGTCAACCCCTCTGCTCGGCCCACAAGCCCCCAC
AAGCTGCGGCTTCATGACCCAGTTGCCGCCCACGCCCTCGGCGTCACGGG
GAAGGAGAGAGAAGGGCCGAGGACGGGGGAGGGGGAGGGGCGCAAGCAAG
CGGGGTCGCACCACCCTCTCGTCCGCAGCACCGCAGACAATGCTCTCACC
AGTGCCCGTCCCCCCAGCGGAGGTCGACATAGACCCCTTGTCCGCCAATG
CCATTACCACAGTCGAGAAATTAGCCGGCTGGGCGGAAGGAGGGGAGTCG
CCCGCGGCCTCCCAAGCCCTCGCGGAGCTGCTGCAGGTGAGCGGGTCTTT
GCCGTCCACTTTCTTCGAGGCCGCAGACGGAGAAATGGTCCCAGAGACGA
CAGCTGCTTCCTCTTCCCCTGTGGGTGGGGTTAAGGGAGGGTCGTCAATG
CCTGAATGGCAGGTTTCGGCTCTGGAGCACGCCATGGAGCATCACAATAA
CCATTTCTCGCCGCAGGATGTGGCGATATCACCGCATCAACGGGATGGGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCAGGAGATGATG
GCGCCGCCTTCACGGCAACCCATCATTGCGCCCGTACTCCGCAAGACCGA
GTCCTTCAACGCGGCGGCCACAATCCTCATGCTCACGGATGGTGCTGGTG
ACGGGGAGAAGGGGATGCTGCCCGAGGGCGCATTGGAAGGAGGGGGAGAA
GGAAGAGCAGGGAGATACGAAAGGATGGGATTTGGAGAAGGAAGGGAAGG
GGGAAAAGAAGAGAAGCTGAAAGAGGAACATCTTCAAGAGGAAGACGACC
ATTTGCACTTCTTACAGTAGGAGAGCCGCGGGCGGGGGTCGATGAACGGC
GAATATGGGGAAAGACGAGTTTGTAGATGAGCATGTCAGGAGATGCGAGG
GAGACGAGAGAATGGGATGGAGTGTGCAAGGAAAATGCGTATTTGTTTTT
TTAGGTTCCAGAAAGCAATGCGAAGGCCAGCATCAATAAAAAGACTTTCA
CAATTAAATAACAAGTTCTCAT
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protein sequence of NO29G01490.1

>NO29G01490.1-protein ID=NO29G01490.1-protein|Name=NO29G01490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=945bp
MYGQSSGVHLPYHVQEQQQQQQEQEQLYSQVPILHSPHHNQDQQQVGGGL
NDGAVSTIMTPSPAASSSSDPTTAATAVPATAAASAVGKKRVRKLGGAKQ
IPGAALGMGNPPGVGMDEGADGGHGPVVSVVEKNAEVLAAATAAAVAARQ
QQYKHQQQLLGSQVATLAESIFRRWGAEGVLREDVVTRVLQHWFLMQSCW
GTDRSRGLLEKFMGLTALSEVALKEAALGGGPETPLQRATQAPTPLPPVH
PFLAVLDDWTSAVALHVSDMKEGVERVTANGRFEETFMGAKEALERLWGE
KLPFAFLLAGLVAPEDRQRLLEELLALTFRSTNALEDRHMVLKCTDRHGL
TFLGIVRIRTHRDLVRQYDSTIVSLQPLPLVVPPSPSSGAVLATSTNPGF
SPVSSSSSSSTRGPRSLSPPPPKPVLSWRPTRDGGRWRYAELTLAQDTSG
RVLVLERWGGGLVRGDGWGLRTLTTGTALYVEGSRVLGVRPLPGEGTGVL
NASQQQQQQQQASVPPLPQVLRIQPLQRYTPSAVSPSLVEGSSGVTKRIF
TQASSGASTAPLAHKNEQHHQAQQRQKQQQQQQQQQQQQQQQQQQQFHPQ
VLSSPSPNAASASAMFPSPGAHNTSAFGSPVLSQHQQHQQQQEGCQVRGH
HQSPTALYDPPSTPLLGPQAPTSCGFMTQLPPTPSASRGRREKGRGRGRG
RGASKRGRTTLSSAAPQTMLSPVPVPPAEVDIDPLSANAITTVEKLAGWA
EGGESPAASQALAELLQVSGSLPSTFFEAADGEMVPETTAASSSPVGGVK
GGSSMPEWQVSALEHAMEHHNNHFSPQDVAISPHQRDGQQQQQQQQQQQQ
RQEMMAPPSRQPIIAPVLRKTESFNAAATILMLTDGAGDGEKGMLPEGAL
EGGGEGRAGRYERMGFGEGREGGKEEKLKEEHLQEEDDHLHFLQ*
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Synonyms
Publications