NO29G01480, NO29G01480 (gene) Nannochloropsis oceanica

Overview
NameNO29G01480
Unique NameNO29G01480
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1556
Alignment locationchr29:469285..470840 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:469285..470840 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO29G01480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL062nonsL062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR079ngnoR079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G01480.1NO29G01480.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G01480.1NO29G01480.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G01480 ID=NO29G01480|Name=NO29G01480|organism=Nannochloropsis oceanica|type=gene|length=1556bp
ATGGCCGCGgtcagctgattggatttcatcatgtcaagcattgcatattc
ctcctccacacgcctctaaaacatacaacctgcttcatcttgctgggaag
caactaaactctcgtcatgtgactttataaatgccacggctgccaaagtt
ttcccataatggcccacccacccttagtcggtctgtgcgggattagatac
agcagaatccatctaacccgtggacctcgtctgcagccctggcactgaag
cgctcaatgtatctcatggaaatgcaaccatatctgtctgaccactgaaa
gctatagatgttttgctcaatcgctcatcttagcgccgcatgagacggcc
tgtgtatcaaagcatccgcgcgagagctattttcaagacagctgaagttc
ccacttaatccttcttctcactcccaaccaactatctagtgctgtcaacc
tcacaaaatcatcatgcgtcttgattaattgggacacatcgtgaggcccc
tgatcttcagtaccttgttaagggcgtgaccttgtgacgtaatgatatgg
cctaactgggtgtcgttccctttttaccatgagttttagtcacttccctc
ttttgttctcgttgtttgcttgtttctcccctttccgaaattgcgattaa
aatctgtcccgcgtctttgagGACGAGAAGGAGGACGAGAAGGAGGACGA
GAAGGAGGAGGAGGAGGGGGAGGAGGAGGACGAGAAGGCGGAGGCGGAGG
AGGAGGACGAGAAGGCGGAGGCGGAGGAGGCAGAGGCGGAGGTTGCGGAG
GAGGAGGCGGAGGCGGAGGAGGCGGAGGAGGCGGAGGCGGAGGAGGCGGA
GGAGGAGGGGGTGGAGGAGGAGGGGGTGGAGGCGGTGGAATTAGAGGAGA
AGGAGGCGGAGGAGAACGAGGACGAGGCGGAGGAGAACGAGGACGAGGCA
GAGGAGGAGGTCATGGGCGGGCCATCCGAGGACTGTATTGATGTAACACC
TGTGAACAGTTCGTGTCCCGGGACGGCAATGGGGCACGCAACATCCTGCG
GGTGTACAGGAGTATGGTCCGTGGGGAAGCTCGTCCCCATGATCTTCGGT
TTGGTCAACCACGGCAGGATATAGGGACACTCTATGTGTAGCCTTCCCGC
TGACCTCCTCTTTTATCCTCCTCCCCCCCCTCCTCCTGGCCCTGTGTGGG
CCGTCCGGGGACTTTGCCAGGTCGAAAAACCTATCGAAGTCGCTAGAAAA
ACTCGGACGAGGAATAAGGGATGACAACAATTTCTTGTTGGAAGGCTCCC
CCTCGTATGCAAGTCCTCGAAGACGTCAGGTTGCATGCGATAGTTCTAGA
GAGATGTAGGAACGCTCAAAAGAACTAACTGGGTGTCATCGTACCCGTAC
CCGCGTACCCGTACCGTACCGTACGCGTACGCGTAGTACAGGAGGGAGAC
TTTGTGGCCGTGATGGAGTGATCACTCCGATGATGTCCAAGCTTCAGCTG
CTTCTTGTCGCTTGAGTCCATCCACAGCCACAGTAATTTCATTCTCCTGT
TGTATT
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protein sequence of NO29G01480.1

>NO29G01480.1-protein ID=NO29G01480.1-protein|Name=NO29G01480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=154bp
MAADEKEDEKEDEKEEEEGEEEDEKAEAEEEDEKAEAEEAEAEVAEEEAE
AEEAEEAEAEEAEEEGVEEEGVEAVELEEKEAEENEDEAEENEDEAEEEV
MGGPSEDCIDVTPVNSSCPGTAMGHATSCGCTGVWSVGKLVPMIFGLVNH
GRI*
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Synonyms
Publications