NO29G01470, NO29G01470 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO29G01470 vs. NCBI_GenBank
Match: CBJ26411.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 179.1 bits (453), Expect = 1.000e-41 Identity = 84/140 (60.00%), Postives = 104/140 (74.29%), Query Frame = 0
Query: 1 MSLLRRVRLRVPAGTAKPGPAIGQALGPLGLNMMEFCKAFNAETAAIIPNTPMQVSLAAYSNRTFTFKIKSPPTSWFLKRCAAVEKGAGKTVHEMVGSVHVKHIYEIAKVKQKDYHLSHLPLRSICRMIFGTCGTMGLKV 141
MS +R VR+RVPAGTAKPGPAIGQALGPLG+NMMEFCK FN ET I+ NTPM L AY++R+FTFK+ +P T+W LKRCA VEKG + HE G V +K +YEIAKVK + H LPL S+C+ + T +MGL++
Sbjct: 1 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHIVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGVEKGGSRAGHEYCGKVGLKALYEIAKVKNAEDHSVLLPLESVCKSVRATALSMGLEI 140
BLAST of NO29G01470 vs. NCBI_GenBank
Match: XP_009836271.1 (ribosomal protein L11 [Aphanomyces astaci] >ETV74165.1 ribosomal protein L11 [Aphanomyces astaci]) HSP 1 Score: 162.5 bits (410), Expect = 9.900e-37 Identity = 79/140 (56.43%), Postives = 103/140 (73.57%), Query Frame = 0
Query: 1 MSLLRRVRLRVPAGTAKPGPAIGQALGPLGLNMMEFCKAFNAETAAIIPNTPMQVSLAAYSNRTFTFKIKSPPTSWFLKRCAAVEKGAGKTVHEMVGSVHVKHIYEIAKVKQKDYHLSHLPLRSICRMIFGTCGTMGLKV 141
MS+ VRLRV AG A P PAIGQALGPLG+NMMEFCK+FN TA IP TP+ V L A ++RTFT+ K+PPT+WFLK+ A + G+ T + VG+V ++HIYEIAKVKQ+D L + L+S+C+ I G+ ++GLKV
Sbjct: 1 MSVKGVVRLRVLAGKAAPSPAIGQALGPLGVNMMEFCKSFNERTAQFIPGTPIPVQLTAMNDRTFTYATKTPPTTWFLKKAAQITSGSDLTGQKEVGTVSLRHIYEIAKVKQQDELLDFIDLQSLCKSIIGSARSIGLKV 140
BLAST of NO29G01470 vs. NCBI_GenBank
Match: OQS05966.1 (50S ribosomal protein L11 [Thraustotheca clavata]) HSP 1 Score: 162.5 bits (410), Expect = 9.900e-37 Identity = 77/134 (57.46%), Postives = 101/134 (75.37%), Query Frame = 0
Query: 7 VRLRVPAGTAKPGPAIGQALGPLGLNMMEFCKAFNAETAAIIPNTPMQVSLAAYSNRTFTFKIKSPPTSWFLKRCAAVEKGAGKTVHEMVGSVHVKHIYEIAKVKQKDYHLSHLPLRSICRMIFGTCGTMGLKV 141
VRLRV AG A P PAIGQALGPLG+NMMEFC++FN TA + PN P+ V L A ++RTFT+ IK+PPT+WFLK+ A + G+ T + VG+V ++HIYEIAKVKQ+D L ++ L S+C+ I GT +MGL+V
Sbjct: 8 VRLRVAAGKAAPSPAIGQALGPLGVNMMEFCRSFNDRTAHLTPNIPVPVQLTAMNDRTFTYAIKTPPTTWFLKKAAQITSGSDLTGQKEVGAVTLRHIYEIAKVKQQDELLDYIELPSLCKSIIGTAKSMGLRV 141
BLAST of NO29G01470 vs. NCBI_GenBank
Match: OQR93227.1 (50S ribosomal protein L11 [Achlya hypogyna]) HSP 1 Score: 162.2 bits (409), Expect = 1.300e-36 Identity = 76/134 (56.72%), Postives = 101/134 (75.37%), Query Frame = 0
Query: 7 VRLRVPAGTAKPGPAIGQALGPLGLNMMEFCKAFNAETAAIIPNTPMQVSLAAYSNRTFTFKIKSPPTSWFLKRCAAVEKGAGKTVHEMVGSVHVKHIYEIAKVKQKDYHLSHLPLRSICRMIFGTCGTMGLKV 141
VRLRV AG A P PAIGQALGPLG+NMMEFC++FN TA + PN P+ V L A ++RTFT+ IK+PPT+WFLK+ A + G+ T + VG+V ++HIYEIAKVKQ+D L ++ L S+C+ I G+ +MGL+V
Sbjct: 8 VRLRVAAGKAAPSPAIGQALGPLGVNMMEFCRSFNDRTAHLTPNIPVPVQLTAMADRTFTYTIKTPPTTWFLKKAAQITSGSDLTGQKEVGTVSLRHIYEIAKVKQQDELLDYIELESLCKSIIGSAKSMGLRV 141
BLAST of NO29G01470 vs. NCBI_GenBank
Match: XP_002898261.1 (50S ribosomal protein L11 [Phytophthora infestans T30-4] >EEY63376.1 50S ribosomal protein L11 [Phytophthora infestans T30-4]) HSP 1 Score: 161.4 bits (407), Expect = 2.200e-36 Identity = 76/134 (56.72%), Postives = 100/134 (74.63%), Query Frame = 0
Query: 7 VRLRVPAGTAKPGPAIGQALGPLGLNMMEFCKAFNAETAAIIPNTPMQVSLAAYSNRTFTFKIKSPPTSWFLKRCAAVEKGAGKTVHEMVGSVHVKHIYEIAKVKQKDYHLSHLPLRSICRMIFGTCGTMGLKV 141
VRLRV AG A P PAIGQALGPLG+NMMEFCKAFN T+ + N P+ V L AYS+RTF F K+PPTSWFLK+ A ++ G+ ++VG+VH++ IYEIAKVKQ+D + ++ L+SIC+ + G+ +MGL V
Sbjct: 9 VRLRVLAGKASPSPAIGQALGPLGVNMMEFCKAFNDRTSKMTENIPVPVVLTAYSDRTFNFVTKTPPTSWFLKKAAGIKSGSSTPGQQVVGTVHLRQIYEIAKVKQQDEMVDYIDLQSICKTLIGSAKSMGLDV 142
BLAST of NO29G01470 vs. NCBI_GenBank
Match: XP_008879110.1 (ribosomal protein L11 [Aphanomyces invadans] >ETV92146.1 ribosomal protein L11 [Aphanomyces invadans]) HSP 1 Score: 159.5 bits (402), Expect = 8.300e-36 Identity = 78/140 (55.71%), Postives = 103/140 (73.57%), Query Frame = 0
Query: 1 MSLLRRVRLRVPAGTAKPGPAIGQALGPLGLNMMEFCKAFNAETAAIIPNTPMQVSLAAYSNRTFTFKIKSPPTSWFLKRCAAVEKGAGKTVHEMVGSVHVKHIYEIAKVKQKDYHLSHLPLRSICRMIFGTCGTMGLKV 141
MS+ VRLRV AG A P PAIGQALGPLG+NMMEFCK+FN T+ IIP TP+ V L A ++RTFT+ K+PPT+WFLK+ A + G+ T + VG+V ++HI+EIAKVKQ+D L + L S+C+ I G+ ++GLKV
Sbjct: 1 MSVKGVVRLRVLAGKAAPSPAIGQALGPLGVNMMEFCKSFNDRTSHIIPGTPIPVQLTAMTDRTFTYATKTPPTTWFLKKAAQITSGSDLTGQKEVGTVSLRHIFEIAKVKQQDELLDFIDLPSLCKSIIGSARSIGLKV 140
BLAST of NO29G01470 vs. NCBI_GenBank
Match: OWY90174.1 (Ribosomal protein L11 [Phytophthora megakarya] >OWZ06274.1 Ribosomal protein L11 [Phytophthora megakarya]) HSP 1 Score: 158.7 bits (400), Expect = 1.400e-35 Identity = 75/134 (55.97%), Postives = 98/134 (73.13%), Query Frame = 0
Query: 7 VRLRVPAGTAKPGPAIGQALGPLGLNMMEFCKAFNAETAAIIPNTPMQVSLAAYSNRTFTFKIKSPPTSWFLKRCAAVEKGAGKTVHEMVGSVHVKHIYEIAKVKQKDYHLSHLPLRSICRMIFGTCGTMGLKV 141
VRLRV AG A P PAIGQALGPLG+NMMEFCKAFN T+ + N P+ V L A+++RTFTF K+PP SWFLK+ A + G+ +VGSVH++ IYEIAKVKQ+D + ++ L+SIC+ + G+ +MGL V
Sbjct: 9 VRLRVLAGKASPSPAIGQALGPLGVNMMEFCKAFNERTSKMTENIPVPVVLTAFTDRTFTFATKTPPASWFLKKAAGITSGSATPGQAVVGSVHLRQIYEIAKVKQQDEMVDYIDLQSICKTLIGSAKSMGLDV 142
BLAST of NO29G01470 vs. NCBI_GenBank
Match: CCI47766.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 158.3 bits (399), Expect = 1.900e-35 Identity = 71/134 (52.99%), Postives = 100/134 (74.63%), Query Frame = 0
Query: 7 VRLRVPAGTAKPGPAIGQALGPLGLNMMEFCKAFNAETAAIIPNTPMQVSLAAYSNRTFTFKIKSPPTSWFLKRCAAVEKGAGKTVHEMVGSVHVKHIYEIAKVKQKDYHLSHLPLRSICRMIFGTCGTMGLKV 141
VRLRV AG A P PAIGQALGPLG+NMMEFCK+FN TA ++ + P V+L A+++RTF F+IK+PPT+WFLK+CA + G+ VG++ ++ IYEIAK+KQ D +L ++ L S+C+ I G+ +MGL++
Sbjct: 8 VRLRVAAGKASPSPAIGQALGPLGVNMMEFCKSFNDRTAHLLADVPTPVTLTAFADRTFEFQIKTPPTTWFLKKCAGITSGSATPGEVYVGNIKLRQIYEIAKIKQTDENLDYMDLPSLCKSIIGSAKSMGLRI 141
BLAST of NO29G01470 vs. NCBI_GenBank
Match: XP_008609307.1 (50S ribosomal protein L11 [Saprolegnia diclina VS20] >EQC37145.1 50S ribosomal protein L11 [Saprolegnia diclina VS20]) HSP 1 Score: 157.9 bits (398), Expect = 2.400e-35 Identity = 75/134 (55.97%), Postives = 100/134 (74.63%), Query Frame = 0
Query: 7 VRLRVPAGTAKPGPAIGQALGPLGLNMMEFCKAFNAETAAIIPNTPMQVSLAAYSNRTFTFKIKSPPTSWFLKRCAAVEKGAGKTVHEMVGSVHVKHIYEIAKVKQKDYHLSHLPLRSICRMIFGTCGTMGLKV 141
VRLRV AG A P PAIGQALGPLG+NMMEFC++FN TA + P+ P+ V L A ++RTF++ IK+PPT+WFLK+ A V G+ T + VG V ++HIYEIAKVKQ+D L ++ L S+C+ I G+ +MGL+V
Sbjct: 8 VRLRVAAGKAAPSPAIGQALGPLGVNMMEFCRSFNDRTAHLTPSIPVPVQLTAMNDRTFSYTIKTPPTTWFLKKAAQVTSGSELTGQKEVGQVSLRHIYEIAKVKQQDELLDYIELESLCKNIIGSAKSMGLRV 141
BLAST of NO29G01470 vs. NCBI_GenBank
Match: CCA16557.1 (50S ribosomal protein L11 putative [Albugo laibachii Nc14]) HSP 1 Score: 157.5 bits (397), Expect = 3.200e-35 Identity = 72/134 (53.73%), Postives = 97/134 (72.39%), Query Frame = 0
Query: 7 VRLRVPAGTAKPGPAIGQALGPLGLNMMEFCKAFNAETAAIIPNTPMQVSLAAYSNRTFTFKIKSPPTSWFLKRCAAVEKGAGKTVHEMVGSVHVKHIYEIAKVKQKDYHLSHLPLRSICRMIFGTCGTMGLKV 141
VRLRV AG A P PAIGQALGPLG+NMMEFCK+FN T+ +I P V+L A ++RTF F+IK+PPT+WFLK+CA + + VG++ ++HIYEIAK+KQ D +L + L S+C+ I G+ +MGLK+
Sbjct: 8 VRLRVAAGKASPSPAIGQALGPLGVNMMEFCKSFNERTSHLIAEVPTPVTLTALADRTFEFQIKTPPTTWFLKKCAGITSASATPGEVFVGNIKLRHIYEIAKIKQTDENLDFMELPSLCKSIIGSAKSMGLKI 141 The following BLAST results are available for this feature:
BLAST of NO29G01470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G01470 ID=NO29G01470|Name=NO29G01470|organism=Nannochloropsis oceanica|type=gene|length=820bpback to top protein sequence of NO29G01470.1 >NO29G01470.1-protein ID=NO29G01470.1-protein|Name=NO29G01470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=150bpback to top Synonyms
Publications
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