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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr29 | genome | chr29:421474..424863 + |
Analyses
This gene is derived from or has results from the following analyses
Homology
BLAST of NO29G01340 vs. NCBI_GenBank
Match: EWM27837.1 (hypothetical protein Naga_100074g8 [Nannochloropsis gaditana]) HSP 1 Score: 300.8 bits (769), Expect = 5.100e-78 Identity = 160/331 (48.34%), Postives = 213/331 (64.35%), Query Frame = 0
Query: 2 GSVMSCYPSSGCNGIPTNSSLQSNFSSCVEFCEGFSLDYFTLDRV--TG-SCACFESDECTEAVYLEDQ-VTSVLYTLNDSNHPCPSIPFTSCTSSNLTCDLSSATFNKGAVSGMQECVDSAVGTNPRILHAFYNPTAEFCNGFTAADCSDGLVTNTGYESAIVQYTNSNATCLEPCKDIDPDNYFKRITARAGNSKTGHLPGKSMRYTLTLVPHKMQPSPPLQSSLDLRVNLSSFLKVTKTHVKGDTRNSKVLPAVIDHVADTVTWEGIGAALLGVGSKRSMPNKLTFNIVATLASDIPKDADLEIEAFLFDEGN-VCNVLVAETSLLVR 328
G V +C +S C+G+P N+S Q +++ C C +L+YFT D TG +C CFE ++CT AV+L DQ SVLYTLND + PCP+IPF++C +N TC+ +ATF G + MQECVD A N IL+ F N T C GFTAADC+ GL + G+ESA++QY N NATCL C D P YF +ITA +K G PG+ ++Y LTLVP K+QPSP L SLDL + +S +L+V K +K T + + A ID AD VTW+ IG L GVG+K+ +P LTF +VA LA + AD+ I+A+L D N +C VLVAET +LV+
Sbjct: 3 GRVSTCAMASTCDGLPGNASFQGSYADCSASC---TLEYFTFDSTLNTGNNCLCFEQNQCTTAVFLGDQGNNSVLYTLNDLDQPCPAIPFSACDLTNFTCNFDAATFFLGTPASMQECVDEATSANIDILYTFLNVTDGRCYGFTAADCAAGLEPSAGFESAVIQYANPNATCLSKCSDFLPAAYFHKITATVNRAKAGTRPGRRLKYKLTLVPRKVQPSPALLPSLDLSLRISPYLEVKKATLK--TTDPALKHAEIDRDADLVTWQNIGGPLFGVGTKKGVPQSLTFTMVAVLAKNAQTAADIGIQAYLSDLNNGICGVLVAETDVLVK 328
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G01340 ID=NO29G01340|Name=NO29G01340|organism=Nannochloropsis oceanica|type=gene|length=3390bp
CGTTACAACTCGTTTGAAGACCTGCGGCCTAAAACGACGAGTTGGCTGCG
GTTACATGTTCTGGTCTTCTAATGAGGACTTGAATTTATAGTTGTCTTCC
ACTACATGATTAAACTTTGTTTGATGTGTTACAATTAACACGAGTACCCA
CACCTTTAGGTGATTAGTAGAGATCCACTCAGTGCTCAAGCGCTTCGCCC
AACCCCGCGTTTCTCAGGAGTATTGCCTGCACATCTTTAGAAGAGGTCGG
CCAACGGCTACATCAAAGGGGCCCATAATGCCCTCGAAGGCTAATTTATA
ATAGCCTGTATTGTATTGTATACTATACAGAAGACTTTGACGTGAAGATG
TTATCTTCGTCAAGCACCCTTCGACCCCTCGGGCCAACAGTACACACACA
GATTGACTTGGGCCGTGTTTCAATGCCTTGGTATTTGAGCACGTCAAAGC
CCCTTCGCCGTTAGTAACATAACGTATGAAATACTATCATATCTCTGACC
CAACAGCCAGCCCCTCCATCCCCCTAAAATGCAGTTTCTCGTGACCGACC
AATACAACCTCGTCACCACCTAAGACATCCAAATTCTTGGAACAAAACAA
GAGTAACATGGGATCAGTTATGTCGTGCTACCCTTCTTCGGGTTGCAACG
GCATTCCAACTAACAGCTCACTCCAGTCTAATTTTTCCAGCTGTGTGGAG
TTTTGTGAAGGATTCTCATTGGATTATTTCACCCTTGATCGTGTCACCGG
GTCCTGTGCCTGTTTTGAAAGCGACGAATGTACGGAGGCCGTCTACTTGG
AGGACCAAGTTACTTCCGTCCTCTACACTTTGAACGATTCAgtaagtttt
atgctaaacgcatactttaagtttcttagagggatgcttagatgagcgtg
aatatcccatcgcttttactcatcaacaccaacttcttgggcagAATCAT
CCTTGCCCGTCCATACCCTTCACGTCTTGCACTTCCAGTAACCTTACGTG
CGATTTAAGTTCTGCGACCTTTAATAAGGGTGCGGTCAGTGGGATGCAAG
AGTGTGTCGACTCGGCCGTCGGCACCAACCCGCGCATTTTGCACGCATTT
TACAACCCCACCGCAGAATTTTGCAACGGATTCACGGCTGCAGATTGCTC
CGATGGGCTGGTAACTAATACGGGCTACGAGAGCGCGATAGTTCAGTACA
CGAACTCTAACGCCACCTGTCTTGAACCTTGCAAGGATATCGACCCTGAT
AATTACTTCAAGAGGATCACTGCCAGAGCTGGGAACAGCAAGACCGGCCA
TCTGCCGGGCAAGTCCATGCGCTACACACTCACCCTCGTCCCCCACAAGA
TGCAGCCTTCTCCCCCGCTTCAAAGCTCCCTGGACTTACGCGTCAACCTC
TCGTCGTTCTTGAAGGTCACCAAGACTCATGTGAAGGGGGATACCAGAAA
CAGCAAAGTGCTTCCGGCCGTCATCGACCACGTCGCGGACACGGTGACCT
GGGAGGGTATAGGGGCCGCGCTACTGGGTGTGGGTTCTAAGCGATCAATG
CCCAATAAGCTCACCTTTAATATCGTTGCCACCCTCGCAAGTGACATCCC
CAAAGATGCTGACTTAGAGATTGAGGCTTTCCTTTTCGATGAAGGCAATG
TCTGCAATGTTCTAGTTGCGGAGACAAGCCTCCTAGTGCGGGACCCCATC
AAAGGTTAGCATCTCGCATCTATTGCGCGAGAAACCTATAAACGATTCAT
AAGCTGGTAATGAATCCGATGCCCGCGAGCAATTCGCGGAATCGAGTAAC
AGCAAATGTGTGAAATGCAAATAATATTGGAATTAAAACACGTGAAGCCT
ACCAGGGTATCACGGACGTGCATCCCATGCCCATCATCTGGAGAGGATAA
AAAAAGCGCGACCGTCAAGTACGGCGACCTCATCAACACGATACTCTAGA
CCAATGTTGAGGAGCAATTTTAATAGTGGACCGCAACAGAAATCTAAGTG
TGGAGGTGATAAGTGTTGACATAAATCCAATAATAAATAATGAACGCGAT
CTTTCTGATCGATGATGCAAAAACGAGTAGCCACTCTATCGGTCATCGCT
ACCTCTCGGAAGTGGGGAAAAAGAGACTTGGGGCCGGCTTAACGATGCGA
AGATATTTCTGTACTTATTTCTTATTTTGTGGTTCGCATGTTCATCCTAC
CTTTGCATAGTTTCTTCTCCTTCCCTATATATAGTGTATCCTGCCTTACA
AAGGTGGCGGGGCCGTAAAAGCCGACGAGGAAAAGACTCCTCCTCCTTCG
CCACCTCTCCCTCCTCCTCTTTCCCTCCCCTCTTCCTTGGGCCGCTGCAG
CAAGCGAACAACAGGACGACCCTTCACTCCTCTTTCGCCGCCTAGACCAA
TGGCAGATGAAGAGGATAAAGGAAAAGGGCTAATGTCAGCAGCAGAGGAA
GACGGAAGAGGGACAAGCCCTCGCACACTGTTACTGCCTCCCCCTCCTCC
TTTTCCTCCTCCTCCTCTTTTTTCTCCTCCTCCTCCTTCTCCTCTTTTTC
CTCCTCCTCTACCGCCGCCGCCGCCGCTTTTTGCTTCTGCTTCCCCCCTC
TTTACCACTCCTTCTCCTTCGCCTGTTTTTCCCCTTACACAACCTCCTTT
TATCTTTTCTCCTTTTGGCTGCTCCTCTCCTTTTCTCACTCCTCCTTCTC
CTCTTTGCCCTCCTCTGTTCGCCCTTGCAACACCACTACCACCACCTCCT
CCTCCTCCTCCTCCCCCACCACCACCACCGTCACCACTTTGTCCACTACC
AGCAGCTCTTCTCTCTCTGCCGTCCTTCCCTCCCTTCCCTCTTTCCTTGC
CCCCCCTTCTCCTCCTCCTCCTCCGCCATCTCGTCTCAATTCTCCCCTCG
GTGGCAGCTGTTGCTGCTGCCGCCGAGCAACGGTTGTTGATGGAAGAGCA
GCTGGAAGGGACACTCTGCCTTCTTCCGCCCCTCCTTTTCCTCCTCTCGG
TCTCGACAGCTGCTGTGGCAGCTGTTGCTGTTGAGGAAGAAGAGATGGAG
GGAGTGGAGCGGGAGGAGAGGAAGGAGGAGCAGCAGCAAAGGACAGGGTT
GGAAACACGTCACTGCTGCTGCTGATGCTGCTGCTGCTGGTGCCGCCCAG
GGGAGGAAAGAAAGCAGTTGCAAGGAGGGAAGCCTGCTGCTGCTGCTCCC
GCTCCTCCAGTCGCTTCTTTCTCTTGAGTGCTGCGTCTTTAGATGTTTGC
TTTCTCTCACCTTTCTTCTTCCTCTCCTTCTCCTTCTCACCCCCCTCCTT
TCTTCCATCCTTACCCTCTTTTCCCTTCTTTTTCCCCTTCCCCTCTGCCT
TCTCCTTCCCGGTCCGGTCCCTGTCCCGCCCTCCCGCCCG back to topprotein sequence of NO29G01340.1 >NO29G01340.1-protein ID=NO29G01340.1-protein|Name=NO29G01340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=333bp
MGSVMSCYPSSGCNGIPTNSSLQSNFSSCVEFCEGFSLDYFTLDRVTGSC
ACFESDECTEAVYLEDQVTSVLYTLNDSNHPCPSIPFTSCTSSNLTCDLS
SATFNKGAVSGMQECVDSAVGTNPRILHAFYNPTAEFCNGFTAADCSDGL
VTNTGYESAIVQYTNSNATCLEPCKDIDPDNYFKRITARAGNSKTGHLPG
KSMRYTLTLVPHKMQPSPPLQSSLDLRVNLSSFLKVTKTHVKGDTRNSKV
LPAVIDHVADTVTWEGIGAALLGVGSKRSMPNKLTFNIVATLASDIPKDA
DLEIEAFLFDEGNVCNVLVAETSLLVRDPIKG* back to top
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