NO29G01330, NO29G01330 (gene) Nannochloropsis oceanica

Overview
NameNO29G01330
Unique NameNO29G01330
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1467
Alignment locationchr29:418987..420453 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:418987..420453 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO29G01330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL061nonsL061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR079ngnoR079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G01330.1NO29G01330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G01330.1NO29G01330.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G01330 ID=NO29G01330|Name=NO29G01330|organism=Nannochloropsis oceanica|type=gene|length=1467bp
ATGGTGGCGAAACCTAAGCGCCGTGGACTCAAACCCCAGGGCAAATTAAA
GAGCGAGAAGCAGTGGGATGCATCCAATCCGCGCAAGCGCAGGAAGAAGA
AGGGCGCGCACAGCTACCAGGATTACCGTAAGGCATGGTGGGATGGGGAG
ATGGAGCGTCGGGCGGTGCGGGACAAGGTCACCGCAGCAGCAGCAGTGGC
GTGGGGCGATGATAATGGGCCCGTTCCGATCCCTCTCGACGCGGCTGGGG
CCAAGgtcaggcggactcatgatgctattaattggggcaggctgctcccg
gcggcgtacgactctctgctttctggtgctacctctccctctgctcctcc
tagCTCTTCTTCATCCTCGTCGTCCTCCCCCTCCGCGACCTCTGCCAAGT
GGACGTCCCAGCAGCCGCCTTACTTAGTCTAAGGAATAAGCAAGGGCCGG
CAACTACGATTGGAAAGCGTGCCACTACTGGCGCTGTCAATCCCGCCAAG
AGGAAGGCGAATATGCTGGCGGTGGTGAGCAAGGTGTTATGGCGAACAAA
GGAAGGGCTCGCTGTCAACCGGAGTTGCATCGCCAGTCAGCATGGCATCC
CCGTCTCCTTCCTTCgtgcgtagctcgggaagtcggatccatgtcaagtc
aatgcccgcggacccaagcccatcctccacgccgtcgaagaactcatcgt
ccagtacctcatctaccggcacgaccacggatttgctgtccccctaaacc
aattgagctgcttagcgacgggaatagcgatccgactgaaaggagattat
tgtgggtggctttcgtgagcgtggtctttatccgcctgaacctaaatggg
cagatcagaacacccaccttttcccccgcgcagTCGCATTCGACAGGCGC
GGGGAGGCGCCCGGAAAGCCGGCCATCACTTTCCCCCCGTTGCCCGAGGC
GGATGACCTGGATGTTTTTCTCCTCCAGCCCTTGGATCCTCCCCCGGGCG
GAGCCCTCTCCTTTCAGGTTGCGGGCCGGGGCAGCCTGTTCCCCAAATCC
TTCCTGTTTCATAGCACGGACGTGTCTTCGATGGGCTGCCGGGGGGTGTT
CGTTAAGTCTGTAGTAGAGGCTCTGCGCTCTATGGTGCAATCGACGTATC
CGGACAGTAATGTCGGTAGCGAGTTGAATTCTTTGCCTGGTTGGTGGAAG
GGCGTTGAGGGGAAGGGAGGAATGGTGGCTTGGTCGGGGTCCTTGTGGGT
GATACATGAGAATTGGGAGGAGTTGAACCAGCAGACTGTCAGCAATGGGA
AGCGCCATGCGTTGGTGGACACGGAGGCGGGGGGGTCCACGAGGCAGCAG
CGCCGCCTTGCAGATTGCTTTGTCGGGAGATGGCACGAATCGAAGGTGGC
AGGAACTGAAGGGTTACTCTTAATCAAGGTCATTATCGATCTCACAAAAG
AATCAATCAATCAATAA
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protein sequence of NO29G01330.1

>NO29G01330.1-protein ID=NO29G01330.1-protein|Name=NO29G01330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=367bp
MVAKPKRRGLKPQGKLKSEKQWDASNPRKRRKKKGAHSYQDYRKAWWDGE
MERRAVRDKVTAAAAVAWGDDNGPVPIPLDAAGAKLFFILVVLPLRDLCQ
VDVPAAALLSLRNKQGPATTIGKRATTGAVNPAKRKANMLAVVSKVLWRT
KEGLAVNRSCIASQHGIPVSFLLAFDRRGEAPGKPAITFPPLPEADDLDV
FLLQPLDPPPGGALSFQVAGRGSLFPKSFLFHSTDVSSMGCRGVFVKSVV
EALRSMVQSTYPDSNVGSELNSLPGWWKGVEGKGGMVAWSGSLWVIHENW
EELNQQTVSNGKRHALVDTEAGGSTRQQRRLADCFVGRWHESKVAGTEGL
LLIKVIIDLTKESINQ*
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Synonyms
Publications