NO29G01310, NO29G01310 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO29G01310 vs. NCBI_GenBank
Match: EWM21363.1 (hypothetical protein Naga_101560g2 [Nannochloropsis gaditana]) HSP 1 Score: 268.9 bits (686), Expect = 1.800e-68 Identity = 145/268 (54.10%), Postives = 175/268 (65.30%), Query Frame = 0 Query: 8 DPRKPKISLASGFLPPPRSTAKWTVESMGVSAAVSPSPSNSSFPCSPQSFILILEFVDKENMTQVLGRISAFSEGKVGKGKKSEAAAGETSKGYFGHNFPLTVLEDFVQVHG--GGGEGGKERGCGDGLTDGERDLLGICRKQELMGKXXXXXXXXXXXXXXXXXXXXXXXAASAYLIAYLKNDYATKQHELRHARFFLDEGYRSACLEAWARLSEKQKKYVSSFLSRLGYHEDVHVDEFQAFHLTEKANFWGIKVDVAWPASVVEGE 274 DP PK L SG LPPP S KWT+E + V S S SS C+ ++ +L LEF DK +MT +LGRISAFSEGK KG KSEA AG+ S+GY+GHNFPLTVLEDF Q+ G GG G + L GE+DL+ +C+K LM K A+S+YLIA+LK+D T+QHEL HAR+FLD YR ACL AW LSEK + Y+S+FLSRLGYHE VH DEFQAF LTEKANFWG+++DVAWP + GE Sbjct: 22 DPGHPKKVLCSGGLPPPFSACKWTLEELLVKQREPISSSASS--CTSRALLLTLEFADKRSMTHMLGRISAFSEGKANKGLKSEAKAGDASRGYYGHNFPLTVLEDFSQIQGASGGKNGARXXXXXXXLARGEQDLVDLCQKLGLMKK--TKGDGPRGSKGHGALGGKGGQASSSYLIAHLKHDLGTRQHELCHARYFLDPTYRQACLTAWEALSEKHRDYLSAFLSRLGYHEAVHADEFQAFALTEKANFWGVRIDVAWPDVIGGGE 285
BLAST of NO29G01310 vs. NCBI_GenBank
Match: ARF09911.1 (hypothetical protein Indivirus_5_34 [Indivirus ILV1]) HSP 1 Score: 80.1 bits (196), Expect = 1.200e-11 Identity = 36/83 (43.37%), Postives = 55/83 (66.27%), Query Frame = 0 Query: 181 YLIAYLKNDYATKQHELRHARFFLDEGYRSACLEAWARLSEKQKKYVSSFLSRLGYHEDVHVDEFQAF----HLTEKANFWGI 260 Y+IAY++ND TKQHEL HA+++ D YR+ + W LS K++ +++ L+ +GY E+ H+DEFQA+ L + NFW I Sbjct: 66 YVIAYIENDQHTKQHELYHAKYYFDTKYRNKVNKLWNSLSCKKRNEITAILNNMGYREEFHLDEFQAYLYSEPLRKNKNFWNI 148
BLAST of NO29G01310 vs. NCBI_GenBank
Match: XP_002957910.1 (hypothetical protein VOLCADRAFT_107854 [Volvox carteri f. nagariensis] >EFJ41046.1 hypothetical protein VOLCADRAFT_107854 [Volvox carteri f. nagariensis]) HSP 1 Score: 79.0 bits (193), Expect = 2.600e-11 Identity = 37/85 (43.53%), Postives = 59/85 (69.41%), Query Frame = 0 Query: 181 YLIAYLKNDYATKQHELRHARFFLDEGYRSACLEAWAR-LSEKQKKYVSSFLSRLGYHEDVHVDEFQAFHLTEKANFWGIKVDVA 265 Y+IA L+ D + +HE+ HAR++LD YR ++ W+R L+ Q+ +++FL+RL Y HVDEFQA+ +TEK+NF+G+ + A Sbjct: 122 YVIATLEGDAHSIRHEMCHARYYLDPSYRDTVMQVWSRSLASAQRDAITAFLNRLKYDTVAHVDEFQAYLVTEKSNFFGMDLTEA 206
BLAST of NO29G01310 vs. NCBI_GenBank
Match: XP_001697884.1 (predicted protein [Chlamydomonas reinhardtii]) HSP 1 Score: 71.6 bits (174), Expect = 4.200e-9 Identity = 35/80 (43.75%), Postives = 55/80 (68.75%), Query Frame = 0 Query: 181 YLIAYLKNDYATKQHELRHARFFLDEGYRSACLEAW-ARLSEKQKKYVSSFLSRLGYHEDVHVDEFQAFHLTEKANFWGI 260 Y+IA L D + +HE+ HAR++LD YR+ + W L+ +Q++ V +FL+RL Y VH DE+QA+ +TEK+NF+G+ Sbjct: 118 YVIATLDGDAHSIRHEMCHARYYLDPPYRTTVAQVWEGALTPQQRESVCAFLTRLKYDPCVHEDEWQAYLVTEKSNFFGM 197
BLAST of NO29G01310 vs. NCBI_GenBank
Match: PNW71643.1 (hypothetical protein CHLRE_16g662950v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 71.6 bits (174), Expect = 4.200e-9 Identity = 35/80 (43.75%), Postives = 55/80 (68.75%), Query Frame = 0 Query: 181 YLIAYLKNDYATKQHELRHARFFLDEGYRSACLEAW-ARLSEKQKKYVSSFLSRLGYHEDVHVDEFQAFHLTEKANFWGI 260 Y+IA L D + +HE+ HAR++LD YR+ + W L+ +Q++ V +FL+RL Y VH DE+QA+ +TEK+NF+G+ Sbjct: 118 YVIATLDGDAHSIRHEMCHARYYLDPPYRTTVAQVWEGALTPQQRESVCAFLTRLKYDPCVHEDEWQAYLVTEKSNFFGM 197
BLAST of NO29G01310 vs. NCBI_GenBank
Match: KXZ52450.1 (hypothetical protein GPECTOR_9g494 [Gonium pectorale]) HSP 1 Score: 69.3 bits (168), Expect = 2.100e-8 Identity = 36/85 (42.35%), Postives = 52/85 (61.18%), Query Frame = 0 Query: 181 YLIAYLKNDYATKQHELRHARFFLDEGYRSACLEAWAR-LSEKQKKYVSSFLSRLGYHEDVHVDEFQAFHLTEKANFWGIKVDVA 265 YLIA L D + +HE+ HAR+ L YR W L+ Q+ +++FL+RL Y VH+DEFQA+ +TEK NF+G+ + A Sbjct: 99 YLIATLDGDAHSIRHEMCHARYHLQPEYRDTVQRVWTECLAAAQRDAITAFLNRLKYDAVVHLDEFQAYLVTEKPNFFGMDLGEA 183
BLAST of NO29G01310 vs. NCBI_GenBank
Match: KNE59785.1 (hypothetical protein AMAG_05247 [Allomyces macrogynus ATCC 38327]) HSP 1 Score: 64.3 bits (155), Expect = 6.700e-7 Identity = 72/267 (26.97%), Postives = 108/267 (40.45%), Query Frame = 0 Query: 1 MGSSGTPDPRKPKISLASGFLPPPR------STAKWTVESMGVSAAVSPSPSN------SSFPCSPQSFILILEFVDKENMTQVLGRISAFSEGKVGKGKKSEA---AAGETSKG----YFGHNFPLTVLEDFVQVHGGGGEGGKERGCGDGLTDGERDLLGICRKQELMGKXXXXXXXXXXXXXXXXXXXXXXXAASAYLIAYLKNDYATKQHELRHARFFLDEG-YRSACLEAWARLSEKQKKYVSSFLSRLGYHEDVHVDEFQA 248 M P K K +A+ PP + +T +T + + +P P++ + P S + +L++ DK + +L R S F E + + +A AA + +G Y+GHNFPL L F+ G RG G T R L + G+ A +YL+ ++ D T QHEL HA + + G YR AC A A L + + V ++L GY E V DEFQA Sbjct: 1 MARKPAPGSGKTKPGVAAQQQPPAKGAKPTAATTTFTDQQLAPYLLPNPPPNDLNECQIAYHPASDRRLVLVVA-KDKATLDALLLRASIFYENPDLQNQYLDATQFAAAQAERGKPFTYYGHNFPLASLAKFLM---AASNAGGARGLTAGETYLVRTLTTKIKALSTSGR----------------SGPTVPTLADSYLVGWVNGDTPTFQHELHHAWYHFNAGEYRMACDAALASLDQVVRLQVRAYLRGCGYCEAVWADEFQA 247 The following BLAST results are available for this feature:
BLAST of NO29G01310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G01310 ID=NO29G01310|Name=NO29G01310|organism=Nannochloropsis oceanica|type=gene|length=822bpback to top protein sequence of NO29G01310.1 >NO29G01310.1-protein ID=NO29G01310.1-protein|Name=NO29G01310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=274bpback to top Synonyms
Publications
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