NO29G01250, NO29G01250 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO29G01250 vs. NCBI_GenBank
Match: EWM21334.1 (hypothetical protein Naga_100075g9 [Nannochloropsis gaditana]) HSP 1 Score: 402.5 bits (1033), Expect = 2.000e-108 Identity = 212/272 (77.94%), Postives = 237/272 (87.13%), Query Frame = 0 Query: 113 VARLRELTVGTDRWTALLAALWALLFLALVVNKQELWVVLAGLVAYACFCFMLDVVAIPPYWNGPLKANQTARLSNGLVCIAHSLAMGLAALFGASAILKLTMTCGFLLFDLWDKTWKRLYTSPPYRYTRGIPYALQGATTLVLSITAICKGFPLNADLLVVLPAFHLLSESIHDLVGLFALECSGILFTTQMLETVLVFPARLLPHAALLAWHLLSIYSSAPSSLN-ASLPPSSPSGEVLASWWATRVMTTLLLMLNASNVTSLFWPAFLR 384 V+RLR L +GTDRWTALL ALWALLFLALVVNKQELWVVLAGLVAYACFCF+LDVVAIPP W+GPLKA +TARLSN LVCIAH+LAMG AALFGASAILKLTMTCGFLLFDLWDKTWKRLYTSPPYRYTRGIPYALQGATTLVLSITAICKG P+NADLLV +PA HLL ES+HDL +FA E + L ++ ETV++FPARLLPHA LL H+L+I+ A S+L AS+PPS+ VL++WWATRVMT LL+MLNASN+ SLFWPAFLR Sbjct: 89 VSRLRGLALGTDRWTALLVALWALLFLALVVNKQELWVVLAGLVAYACFCFLLDVVAIPPIWDGPLKAKETARLSNSLVCIAHALAMGFAALFGASAILKLTMTCGFLLFDLWDKTWKRLYTSPPYRYTRGIPYALQGATTLVLSITAICKGVPINADLLVGIPAAHLLVESVHDLTRMFASERAPPLGLARVTETVVLFPARLLPHALLLVSHILTIH--ATSALRCASIPPSTL--PVLSTWWATRVMTVLLVMLNASNLASLFWPAFLR 356
BLAST of NO29G01250 vs. NCBI_GenBank
Match: XP_005852476.1 (solute carrier family 35 member b1 [Nannochloropsis gaditana CCMP526] >EKU23356.1 solute carrier family 35 member b1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 92.8 bits (229), Expect = 3.400e-15 Identity = 47/81 (58.02%), Postives = 55/81 (67.90%), Query Frame = 0 Query: 443 GRAYDLEAFLHLHPGGAHALSLGQGRDCTALFESYHPFTRKHKLVLGKYRVEVEEEVLDQYCVARKEGGKGGGARGRKEWE 524 GR Y +E GG+HAL LGQGRDCTALFESYHPFT +H+ +L K+RV VEE VLD YC+ GGGARG+ E Sbjct: 390 GREYYIEGH-----GGSHALRLGQGRDCTALFESYHPFTERHRQILAKHRVAVEETVLDAYCL-------GGGARGQGRGE 458
BLAST of NO29G01250 vs. NCBI_GenBank
Match: XP_002183026.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45244.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >AFQ33496.1 palmitoyl-CoA delta 9-desaturase [Phaeodactylum tricornutum]) HSP 1 Score: 87.8 bits (216), Expect = 1.100e-13 Identity = 36/60 (60.00%), Postives = 46/60 (76.67%), Query Frame = 0 Query: 437 LLWYVHGRAYDLEAFLHLHPGGAHALSLGQGRDCTALFESYHPFTRKHKLVLGKYRVEVE 497 LLW +HG YDL ++ HPGG A+ LG+GRDCTALFESYHPFT +H+ VL K+RV ++ Sbjct: 16 LLWMIHGNYYDLHTYVSRHPGGKEAILLGRGRDCTALFESYHPFTSQHRRVLEKHRVTID 75
BLAST of NO29G01250 vs. NCBI_GenBank
Match: GAX16474.1 (acyl-lipid (8-3)-desaturase [Fistulifera solaris]) HSP 1 Score: 86.3 bits (212), Expect = 3.100e-13 Identity = 35/56 (62.50%), Postives = 44/56 (78.57%), Query Frame = 0 Query: 438 LWYVHGRAYDLEAFLHLHPGGAHALSLGQGRDCTALFESYHPFTRKHKLVLGKYRV 494 LW + G YDL ++ LHPGG A+ LG+GRDCTALFESYHPFT++H+ VL KYR+ Sbjct: 201 LWTIRGEQYDLNEYISLHPGGKEAILLGRGRDCTALFESYHPFTQQHETVLQKYRI 256
BLAST of NO29G01250 vs. NCBI_GenBank
Match: GAX19479.1 (acyl-lipid (7-3)-desaturase [Fistulifera solaris]) HSP 1 Score: 84.0 bits (206), Expect = 1.600e-12 Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 0 Query: 437 LLWYVHGRAYDLEAFLHLHPGGAHALSLGQGRDCTALFESYHPFTRKHKLVLGKYRV 494 +LW + G YDL ++ HPGG A+ LG+GRDCTALFESYHPFT++H+ VL KYR+ Sbjct: 200 MLWTIRGEQYDLNDYISHHPGGKEAILLGRGRDCTALFESYHPFTQQHETVLQKYRI 256
BLAST of NO29G01250 vs. NCBI_GenBank
Match: EWM29412.1 (Cytochrome b5, heme-binding site [Nannochloropsis gaditana]) HSP 1 Score: 81.3 bits (199), Expect = 1.000e-11 Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 0 Query: 438 LWYVHGRAYDLEAFLHLHPGGAHALSLGQGRDCTALFESYHPFT-RKHKLVLGKYRVEVEEEVLDQYCVARKEG 511 LWY+HGRAYDL F++ HPGG L QGRDCTALFE++HPFT R KL+ V+V ++L + C +G Sbjct: 67 LWYIHGRAYDLTDFINKHPGGPTVLLNTQGRDCTALFEAFHPFTDRPAKLLAKMKEVKVSPDILAEKCTDISQG 140
BLAST of NO29G01250 vs. NCBI_GenBank
Match: OLQ06011.1 (Delta(5) fatty acid desaturase B [Symbiodinium microadriaticum]) HSP 1 Score: 79.3 bits (194), Expect = 3.800e-11 Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 0 Query: 438 LWYVHGRAYDLEAFLHLHPGGAHALSLGQGRDCTALFESYHPFTRKHKLVLGKYRV 494 LWY+HG +YDL F+ HPGG A+ G+GRDCTALFESYHP+ KH+ VL + V Sbjct: 177 LWYIHGNSYDLHDFVDKHPGGRFAILTGRGRDCTALFESYHPWNDKHRKVLKAHGV 232
BLAST of NO29G01250 vs. NCBI_GenBank
Match: XP_014156428.1 (hypothetical protein SARC_05199 [Sphaeroforma arctica JP610] >KNC82526.1 hypothetical protein SARC_05199 [Sphaeroforma arctica JP610]) HSP 1 Score: 75.1 bits (183), Expect = 7.300e-10 Identity = 34/64 (53.12%), Postives = 43/64 (67.19%), Query Frame = 0 Query: 438 LWYVHGRAYDLEAFLHLHPGGAHALSLGQGRDCTALFESYHPFTRKHKLVLGKYRVEVEEEVLD 502 +WY+HG+AYD F+ HPGG A+ +GQGRDCT LFESYH F KL L KY ++ E + D Sbjct: 44 VWYLHGKAYDFTDFVKRHPGGEKAILIGQGRDCTELFESYHTFLPSDKL-LAKYALDKEGSLGD 106
BLAST of NO29G01250 vs. NCBI_GenBank
Match: XP_002951536.1 (hypothetical protein VOLCADRAFT_92130 [Volvox carteri f. nagariensis] >EFJ47347.1 hypothetical protein VOLCADRAFT_92130 [Volvox carteri f. nagariensis]) HSP 1 Score: 74.3 bits (181), Expect = 1.200e-9 Identity = 30/62 (48.39%), Postives = 41/62 (66.13%), Query Frame = 0 Query: 439 WYVHGRAYDLEAFLHLHPGGAHALSLGQGRDCTALFESYHPFTRKHKLVLGKYRVEVEEEVL 501 W +HG+AYDL +++ HPGG A+ LG+GRDCT LFE YH KH VL ++R+ + L Sbjct: 21 WVIHGQAYDLASYVAKHPGGVDAILLGRGRDCTELFEQYHVLNNKHLRVLERFRISLPSSKL 82
BLAST of NO29G01250 vs. NCBI_GenBank
Match: ETO19641.1 (hypothetical protein RFI_17588 [Reticulomyxa filosa]) HSP 1 Score: 73.6 bits (179), Expect = 2.100e-9 Identity = 34/65 (52.31%), Postives = 42/65 (64.62%), Query Frame = 0 Query: 439 WYVHGRAYDLEAFLHLHPGGAHALSLGQGRDCTALFESYHPFTRKHKLVLGKYRVEVEEEVLDQY 504 WY+HG+AYD AF HPGG A+ LG+GRDCTALFESYH + +L KY E+ E + Y Sbjct: 195 WYLHGKAYDFSAFATRHPGGQQAIFLGRGRDCTALFESYHTYLPSSD-ILAKY--EIPEGIQSSY 256 The following BLAST results are available for this feature:
BLAST of NO29G01250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G01250 ID=NO29G01250|Name=NO29G01250|organism=Nannochloropsis oceanica|type=gene|length=1578bpback to top protein sequence of NO29G01250.1 >NO29G01250.1-protein ID=NO29G01250.1-protein|Name=NO29G01250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=526bpback to top Synonyms
Publications
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