NO29G01190, NO29G01190 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO29G01190 vs. NCBI_GenBank
Match: EWM21335.1 (protein phosphatase 4 regulatory subunit 1 [Nannochloropsis gaditana]) HSP 1 Score: 281.2 bits (718), Expect = 4.500e-72 Identity = 145/217 (66.82%), Postives = 169/217 (77.88%), Query Frame = 0 Query: 1 MREEPQMATFEDLSIDDSLDLLSRVQQYGTSNIALQRLVHVKMLTEAADSVPYDALHDRLLPLLRILATDNEWVVRQHLGEQLGGVARACVKPQGEGRLEEGPEXXXXXXXXXXXXXXEGPGYRGVLELLLPLVHKLLNDNQEEVRLSTGVSLCEICALLKQEDRGKHALTLVLQLAHDDEQEELRMTAAKLLNDMVESLGPDLCHQFISPELVSLA 218 M EPQ ATFEDLSIDDSL L+RV+QYGTS IALQRLVHVKMLT+AA+SVPY+++ L PLLR L+ DNEWV+RQHLGEQLGGVA AC++ + EG +GPGYRG++E +LPL+ LLND+Q+EVR S+G SLC IC+LL EDRG+ ALTL LQLAHDDEQE+LRMTAAKLLNDMVE LGPDLC QF+SPELVSLA Sbjct: 1 MEGEPQTATFEDLSIDDSLGALARVRQYGTSAIALQRLVHVKMLTDAAESVPYESIQTDLFPLLRALSMDNEWVIRQHLGEQLGGVAAACLR-EAEGE--------------------DGPGYRGIIESILPLIQTLLNDSQDEVRQSSGASLCHICSLLAPEDRGRRALTLALQLAHDDEQEDLRMTAAKLLNDMVEILGPDLCTQFVSPELVSLA 196
BLAST of NO29G01190 vs. NCBI_GenBank
Match: CCA26742.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 184.5 bits (467), Expect = 5.700e-43 Identity = 100/212 (47.17%), Postives = 136/212 (64.15%), Query Frame = 0 Query: 9 TFEDLSIDDSLDLLSRVQQYGTSNIALQRLVHVKMLTEAADSVPYDALHDRLLPLLRILATDNEWVVRQHLGEQLGGVARACVKPQGEGRLEEGPEXXXXXXXXXXXXXXEGPGYRGVLELLLPLVHKLLNDNQEEVRLSTGVSLCEICALLKQEDRGKHALTLVLQLAHDDEQEELRMTAAKLLNDMVESLGPDLCHQFISPELVSLAEDP 221 TFEDL+IDD+L L RV +Y SNIALQR++HVKML E + + + A D ++PLL L D E+VVRQH+ Q G+ R +K EG E GYR +L++ +PL+ KL++D Q EVR + G SL E+ A+++QED+G+H LT+VL LAHDD+ E R +AA L N++ + LGPDLC QF PEL+SL+EDP Sbjct: 30 TFEDLAIDDTLSDLDRVTKYVRSNIALQRVIHVKMLQETSQIIGFQATCDYIIPLLEPLVNDVEYVVRQHVAFQFPGICRFLLK--------EGQECQEAL----------SSGYRILLDVFIPLISKLMSDPQYEVRSAAGDSLVEMAAMIQQEDQGQHILTIVLPLAHDDDNEHYRTSAALLYNNLAQHLGPDLCQQFCVPELISLSEDP 223
BLAST of NO29G01190 vs. NCBI_GenBank
Match: CCI49382.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 174.1 bits (440), Expect = 7.700e-40 Identity = 98/232 (42.24%), Postives = 138/232 (59.48%), Query Frame = 0 Query: 9 TFEDLSIDDSLDLLSRVQQYGTSNIALQR-------------------LVHVKMLTEAADSVPYDALHDRLLPLLRILATDNEWVVRQHLGEQLGGVARACVKPQGEGRLEEGPEXXXXXXXXXXXXXXEGPGYRGVLELLLPLVHKLLNDNQEEVRLSTGVSLCEICALLKQEDRGKHALTLVLQLAHDDEQEELRMTAAKLLNDMVESLGPDLCHQFISPELVSLAEDPV 222 TFEDL+IDD+L L RV +Y SNIALQR ++HVKML E A + + A D ++PLL L D E+VVRQH+ Q G+ + +K E ++G + GYR +L++ +PL+ KL++D Q EVR + G SL E+ A+++Q+D+G+H LT+VL LAHDD+ E R +AA L N++ LGPDLC QF PEL+SL+EDP+ Sbjct: 30 TFEDLAIDDTLSDLDRVTKYVRSNIALQRYVSSLAIRIGENVLNIDFSVIHVKMLQETAQIIGFQATCDHIIPLLTPLVNDAEYVVRQHVAFQFPGICKFLLKQSQE--YQDG-------------VSNQSSGYRILLDVFIPLISKLMSDPQYEVRSAAGDSLVEMAAMIQQDDQGQHILTIVLPLAHDDDNEHYRTSAALLYNNLARHLGPDLCQQFCVPELISLSEDPI 246
BLAST of NO29G01190 vs. NCBI_GenBank
Match: OQS00110.1 (hypothetical protein THRCLA_06221 [Thraustotheca clavata]) HSP 1 Score: 171.4 bits (433), Expect = 5.000e-39 Identity = 97/214 (45.33%), Postives = 129/214 (60.28%), Query Frame = 0 Query: 9 TFEDLSIDDSLDLLSRVQQYGTSNIALQRLVHVKMLTEAADSVPYDALHDRLLPLLRILATDNEWVVRQHLGEQLGGVARACVKPQGEGRLEEGPEXXXXXXXXXXXXXXEGPGYRGVLELLLPLVHKLLNDNQEEVRLSTGVSLCEICALLKQEDRGKHALTLVLQLAHDDEQEELRMTAAKLLNDMVESLGPDLCHQFISPELVSLAEDPVF 223 TFEDL+IDDSL L RV +Y SNIALQR++HV+ML E A + YD D ++PLL L D E+VVRQH+ QL G+ + + + GY+ VLE+++PL+ KLL+D Q EVR SL I ++K ED+G+H LTLVL AH+D+ E++R+T LLN + LG DLC QF PE +SL+EDPVF Sbjct: 558 TFEDLAIDDSLTDLDRVMRYVCSNIALQRVIHVRMLEETATASGYDKTCDCIIPLLDPLVNDAEFVVRQHVAGQLPGLCKFLI------------------------ADGQDAGYKIVLEIMMPLMSKLLSDPQAEVRHIACESLVAIAEVIKPEDQGQHVLTLVLPFAHEDDDEQMRITGLVLLNKLAIFLGRDLCCQFCVPEFISLSEDPVF 747
BLAST of NO29G01190 vs. NCBI_GenBank
Match: OQS01286.1 (hypothetical protein ACHHYP_01369 [Achlya hypogyna]) HSP 1 Score: 170.2 bits (430), Expect = 1.100e-38 Identity = 99/214 (46.26%), Postives = 129/214 (60.28%), Query Frame = 0 Query: 9 TFEDLSIDDSLDLLSRVQQYGTSNIALQRLVHVKMLTEAADSVPYDALHDRLLPLLRILATDNEWVVRQHLGEQLGGVARACVKPQGEGRLEEGPEXXXXXXXXXXXXXXEGPGYRGVLELLLPLVHKLLNDNQEEVRLSTGVSLCEICALLKQEDRGKHALTLVLQLAHDDEQEELRMTAAKLLNDMVESLGPDLCHQFISPELVSLAEDPVF 223 TFEDL+IDDSL L RV +Y SNIALQR++HV+ML E A + YD ++PLL L D E+VVRQH+ QL G+ + + GE GY+ VL+ ++PLV KLL+D Q EVR SL I ++K ED+G+H LTLVL AH+D+ E++R+TA LLN + LG DLC QF PE +SL+EDPVF Sbjct: 17 TFEDLAIDDSLTDLDRVLRYVESNIALQRVIHVRMLEETAIASGYDKTCVAIIPLLEPLVNDVEFVVRQHVAGQLPGLCKFLIAAGGEA------------------------GYKIVLDSMMPLVSKLLSDPQAEVRHIACESLVAIAEVIKPEDQGQHVLTLVLPFAHEDDDEQMRITALILLNKLAVFLGCDLCCQFCVPEFISLSEDPVF 206
BLAST of NO29G01190 vs. NCBI_GenBank
Match: CBJ48502.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 152.9 bits (385), Expect = 1.800e-33 Identity = 97/214 (45.33%), Postives = 117/214 (54.67%), Query Frame = 0 Query: 9 TFEDLSIDDSLDLLSRVQQYGTSNIALQRLVHVKMLTEAADSVPYDALHDRLLPLLRILATDNEWVVRQHLGEQLGGVARACVKPQGEGRLEEGPEXXXXXXXXXXXXXXEGPGYRGVLELLLPLVHKLLNDNQEEVRLSTGVSLCEICALLKQEDRGKHALTLVLQLAHDDEQEELRMTAAKLLNDMVESLGPDLCHQFISPELVSLAEDPVF 223 TFEDLSIDD L L R+ +Y +S+IALQRLVHVKML E +V ++ ++PLL LA D E VVRQHLGEQL +AR C RL +G E L+K D G H LT+VLQLAHDDEQEELRMTAA LLND+ ++LG DLC QF++PE+ SL+EDPVF Sbjct: 8 TFEDLSIDDELTQLQRLVRYSSSSIALQRLVHVKMLAETVTAVGFEQTVKSVVPLLGPLAEDQELVVRQHLGEQLEEIARFC-------RL-QGKE----------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMKPIDLGHHVLTIVLQLAHDDEQEELRMTAAALLNDLADALGYDLCKQFVTPEMESLSEDPVF 197
BLAST of NO29G01190 vs. NCBI_GenBank
Match: GBG31937.1 (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 146.0 bits (367), Expect = 2.200e-31 Identity = 84/220 (38.18%), Postives = 123/220 (55.91%), Query Frame = 0 Query: 3 EEPQMATFEDLSIDDSLDLLSRVQQYGTSNIALQRLVHVKMLTEAADSVPYDALHDRLLPLLRILATDNEWVVRQHLGEQLGGVARACVKPQGEGRLEEGPEXXXXXXXXXXXXXXEGPGYRGVLELLLPLVHKLLNDNQEEVRLSTGVSLCEICALLKQEDRGKHALTLVLQLAHDDEQEELRMTAAKLLNDMVESLGPDLCHQFISPELVSLAEDPVF 223 +E TFEDL+ID LD + RV +Y T + LQRLVHV ML++ A S ++ RL PL R + D E VVRQ+L QL + + C E G E Y+ + +L+P L+ D ++VR + + L + A +++ D +H L++VL+LAHD+ E+LR+T+A LLN + GP+LC QF+ PELVSL++DP F Sbjct: 30 DEALTPTFEDLAIDPGLDDVDRVVRYATGTVELQRLVHVMMLSDTARSAGFETAAARLFPLTREICRDQEPVVRQNLATQLSAMCQFC--------SEVGTE----------------EAYKASISMLVPTFRTLVLDGVDDVREAASIHLIKSAAHVREGDLMEHILSIVLELAHDEGNEKLRITSAGLLNGLAPRFGPELCQQFVVPELVSLSQDPSF 225
BLAST of NO29G01190 vs. NCBI_GenBank
Match: ETI32258.1 (hypothetical protein F443_20898 [Phytophthora parasitica P1569]) HSP 1 Score: 143.7 bits (361), Expect = 1.100e-30 Identity = 87/214 (40.65%), Postives = 112/214 (52.34%), Query Frame = 0 Query: 9 TFEDLSIDDSLDLLSRVQQYGTSNIALQRLVHVKMLTEAADSVPYDALHDRLLPLLRILATDNEWVVRQHLGEQLGGVARACVKPQGEGRLEEGPEXXXXXXXXXXXXXXEGPGYRGVLELLLPLVHKLLNDNQEEVRLSTGVSLCEICALLKQEDRGKHALTLVLQLAHDDEQEELRMTAAKLLNDMVESLGPDLCHQFISPELVSLAEDPVF 223 TFEDL+IDDSL L RV +Y SNI LQR++HVKML E A SV + A D+LLPLL L D E+VVRQH+ Q + + V + + SL E+ AL+K ED+G+H LT+VL LAHDD+ E+ R++A L N + E GP+LC QF PEL+SL+EDPVF Sbjct: 167 TFEDLAIDDSLSDLQRVTKYVCSNIPLQRVIHVKMLHETARSVGFQATCDQLLPLLEPLVCDVEYVVRQHVALQFPPLCQFLVGADPD------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXAASESLVEMAALVKPEDQGQHVLTIVLPLAHDDDNEQFRISAVALYNGLAEHFGPELCQQFCVPELISLSEDPVF 356
BLAST of NO29G01190 vs. NCBI_GenBank
Match: XP_008914495.1 (hypothetical protein PPTG_18256 [Phytophthora parasitica INRA-310] >ETK72632.1 hypothetical protein L915_20310 [Phytophthora parasitica] >ETL79302.1 hypothetical protein L917_20048 [Phytophthora parasitica] >ETN00289.1 hypothetical protein PPTG_18256 [Phytophthora parasitica INRA-310]) HSP 1 Score: 143.7 bits (361), Expect = 1.100e-30 Identity = 87/214 (40.65%), Postives = 112/214 (52.34%), Query Frame = 0 Query: 9 TFEDLSIDDSLDLLSRVQQYGTSNIALQRLVHVKMLTEAADSVPYDALHDRLLPLLRILATDNEWVVRQHLGEQLGGVARACVKPQGEGRLEEGPEXXXXXXXXXXXXXXEGPGYRGVLELLLPLVHKLLNDNQEEVRLSTGVSLCEICALLKQEDRGKHALTLVLQLAHDDEQEELRMTAAKLLNDMVESLGPDLCHQFISPELVSLAEDPVF 223 TFEDL+IDDSL L RV +Y SNI LQR++HVKML E A SV + A D+LLPLL L D E+VVRQH+ Q + + V + + SL E+ AL+K ED+G+H LT+VL LAHDD+ E+ R++A L N + E GP+LC QF PEL+SL+EDPVF Sbjct: 21 TFEDLAIDDSLSDLQRVTKYVCSNIPLQRVIHVKMLHETARSVGFQATCDQLLPLLEPLVCDVEYVVRQHVALQFPPLCQFLVGADPD------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXAASESLVEMAALVKPEDQGQHVLTIVLPLAHDDDNEQFRISAVALYNGLAEHFGPELCQQFCVPELISLSEDPVF 210
BLAST of NO29G01190 vs. NCBI_GenBank
Match: ETL26087.1 (hypothetical protein L916_20177 [Phytophthora parasitica]) HSP 1 Score: 143.7 bits (361), Expect = 1.100e-30 Identity = 87/214 (40.65%), Postives = 112/214 (52.34%), Query Frame = 0 Query: 9 TFEDLSIDDSLDLLSRVQQYGTSNIALQRLVHVKMLTEAADSVPYDALHDRLLPLLRILATDNEWVVRQHLGEQLGGVARACVKPQGEGRLEEGPEXXXXXXXXXXXXXXEGPGYRGVLELLLPLVHKLLNDNQEEVRLSTGVSLCEICALLKQEDRGKHALTLVLQLAHDDEQEELRMTAAKLLNDMVESLGPDLCHQFISPELVSLAEDPVF 223 TFEDL+IDDSL L RV +Y SNI LQR++HVKML E A SV + A D+LLPLL L D E+VVRQH+ Q + + V + + SL E+ AL+K ED+G+H LT+VL LAHDD+ E+ R++A L N + E GP+LC QF PEL+SL+EDPVF Sbjct: 21 TFEDLAIDDSLSDLQRVTKYVCSNIPLQRVIHVKMLHETARSVGFQATCDQLLPLLEPLVCDVEYVVRQHVALQFPPLCQFLVGADPD------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXAASESLVEMAALVKPEDQGQHVLTIVLPLAHDDDNEQFRISAVALYNGLAEHFGPELCQQFCVPELISLSEDPVF 210 The following BLAST results are available for this feature:
BLAST of NO29G01190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G01190 ID=NO29G01190|Name=NO29G01190|organism=Nannochloropsis oceanica|type=gene|length=1807bpback to top protein sequence of NO29G01190.1 >NO29G01190.1-protein ID=NO29G01190.1-protein|Name=NO29G01190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=351bpback to top Synonyms
Publications
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