NO29G01120, NO29G01120 (gene) Nannochloropsis oceanica

Overview
NameNO29G01120
Unique NameNO29G01120
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1987
Alignment locationchr29:369065..371051 +

Link to JBrowse

Properties
Property NameValue
Description26s proteasome non-atpase regulatory subunit 13
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:369065..371051 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR035298PSMD13
IPR000717PCI_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Homology
BLAST of NO29G01120 vs. NCBI_GenBank
Match: EWM21321.1 (26s proteasome non-atpase regulatory subunit 13 [Nannochloropsis gaditana])

HSP 1 Score: 599.7 bits (1545), Expect = 8.100e-168
Identity = 307/380 (80.79%), Postives = 333/380 (87.63%), Query Frame = 0
Query:  120 MTEYIQTAIAAAPDLQEPLSQLGDLHARKLWHQLTDALLTFLKDSSRAQQVDCRGLYDNFICKFETKLNPLRLAAVTAAVAKALLPDVDAARTFLQNVAEKRERLGREAALLIDMEIVMLKLRQGDMSEVEATLKAAKSVLEGLAGADAIVYSSYYKAASEYHKVVGPPEAFYKDALMFLAYTPLESLPVEEQYTLAVDISLAALTGDGVFNFGEVLATPILSVLSQTPHAWLSDLLQVFDAGDVDKFAQLVETHREAYFSQPALANRQEFIKEKVVLLSLMNLVFETPSHERTIPFTTVATRGRIGVEQVEWLLMRAMSLGLIKGVIEEVAQEVSVSWVQPRVLNQEQVRQLAGRLAGWSGKVSETLGYVEGQTPELFN 500
            MTEYIQT IAA P L EPLS LGDLHARKLWHQLT ALL+FLKD +  QQVD R LY NFI KFE KLNPLRLA V A ++KALLPDVDAAR FLQ   EKRER G EA+L IDMEIV LKLRQGD+ EVE  LKAAK VLEGL GADA+VYS+YY+AASEYHK+VGPPEAFYK+ALM+LAYTP+ESL  EEQ TLAVDISLAALTGDGVFNFGEVL+TPILSVL+Q PHAWLS+LL VFDAGDVD+FA LVE HRE Y+SQPAL NR+EFIKEKVVLLSL+NLVFETPSHERTIPF+ VA RGRIG EQVEWLLMRAMSLGLIKGVI+EVAQEV+VSWVQPRVLNQEQ++QLA RL GW GKV ETLG+VE QTPELFN
Sbjct:    1 MTEYIQTTIAAKPALHEPLSNLGDLHARKLWHQLTIALLSFLKDPNYVQQVDLRALYQNFIVKFEAKLNPLRLAEVAATLSKALLPDVDAARAFLQQFEEKRERYGSEASLFIDMEIVSLKLRQGDVREVEPNLKAAKLVLEGLTGADAMVYSAYYRAASEYHKMVGPPEAFYKNALMYLAYTPVESLTAEEQSTLAVDISLAALTGDGVFNFGEVLSTPILSVLAQGPHAWLSELLHVFDAGDVDRFAALVERHREEYYSQPALVNREEFIKEKVVLLSLINLVFETPSHERTIPFSKVAARGRIGTEQVEWLLMRAMSLGLIKGVIDEVAQEVNVSWVQPRVLNQEQIKQLAVRLEGWGGKVQETLGFVEEQTPELFN 380          
BLAST of NO29G01120 vs. NCBI_GenBank
Match: CBJ31774.1 (26S proteasome subunit like protein [Ectocarpus siliculosus])

HSP 1 Score: 374.0 bits (959), Expect = 7.200e-100
Identity = 194/378 (51.32%), Postives = 260/378 (68.78%), Query Frame = 0
Query:  122 EYIQTAIAAAPDLQEPLSQLGDLHARKLWHQLTDALLTFLKDSSRAQQ-VDCRGLYDNFICKFETKLNPLRLAAVTAAVAKALLPDVDAARTFLQNVAEKRERLGREAALLIDMEIVMLKLRQGDMSEVEATLKAAKSVLEGLAGADAIVYSSYYKAASEYHKVVGPPEAFYKDALMFLAYTPLESLPVEEQYTLAVDISLAALTGDGVFNFGEVLATPILSVLSQTPHAWLSDLLQVFDAGDVDKFAQLVETHREAYFSQPALANRQEFIKEKVVLLSLMNLVFETPSHERTIPFTTVATRGRIGVEQVEWLLMRAMSLGLIKGVIEEVAQEVSVSWVQPRVLNQEQVRQLAGRLAGWSGKVSETLGYVEGQTPELF 499
            +YI+      PD+ +  ++LGDL +RKLWHQLT ALL F+ D + A+       L   F+  FE K+N LR   +  AV K     + A + F +   EKRERLG EA+LL++ E+ +L LR G ++E +  ++  K  +E L  A+  V+S+YY+ +SEY+K VGPP++FY+ ALMFLAYTPLE +P  E+YTLA DISLAALTG+GVFNFGEVLATPILS+L  +P+AWL  ++Q F+ GD+D F +L   ++E   +QPAL +R  F KEK+ LL LMN+VFE  S +R IPF  +A R ++ V+QVEWL+MRAMSL L+KGV++EV + V VSWVQPRVL   Q+ +LA RL  W G+V E   YVE QTPELF
Sbjct:    2 DYIEQQALQYPDMADKYNKLGDLFSRKLWHQLTVALLEFVSDPANAEAGGGLVRLCTEFVANFEAKMNQLRFVQILCAVGKTCSDPLVATQLF-ETALEKRERLGPEASLLLESELGLLVLRAGKVAEAKEVVEKGKVAVEELESAETAVHSAYYRLSSEYYKTVGPPDSFYRSALMFLAYTPLEGIPQAERYTLATDISLAALTGEGVFNFGEVLATPILSMLDGSPNAWLGSMMQAFNMGDIDAFNKLCAENQETMSAQPALVSRATFTKEKIALLCLMNMVFERHSQDRNIPFEEIAARTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVSWVQPRVLEHSQLARLADRLGEWRGRVDEAHVYVEEQTPELF 378          
BLAST of NO29G01120 vs. NCBI_GenBank
Match: XP_009519788.1 (hypothetical protein PHYSODRAFT_554654 [Phytophthora sojae] >EGZ24500.1 hypothetical protein PHYSODRAFT_554654 [Phytophthora sojae])

HSP 1 Score: 345.5 bits (885), Expect = 2.700e-91
Identity = 182/382 (47.64%), Postives = 254/382 (66.49%), Query Frame = 0
Query:  120 MTEYIQTAIAAAPDLQEPLSQLGDLHARKLWHQLTDALLTFLKD-SSRAQQVDCRGLYDNFICKFETKLNPLRLAAVTAAVAKALLPDVDAARTFLQNVAEKRERLGREAALLIDMEIVMLKLRQGD--MSEVEATLKAAKSVLEGLAGADAIVYSSYYKAASEYHKVVGPPEAFYKDALMFLAYTPLESLPVEEQYTLAVDISLAALTGDGVFNFGEVLATPILSVLSQTPHAWLSDLLQVFDAGDVDKFAQLVETHREAYFSQPALANRQEFIKEKVVLLSLMNLVFETPSHERTIPFTTVATRGRIGVEQVEWLLMRAMSLGLIKGVIEEVAQEVSVSWVQPRVLNQEQVRQLAGRLAGWSGKVSETLGYVEGQTPELF 499
            MT++I T  AA PD+ +   +L DLH RKL+H+LT  L  F++D +     ++   LY  FI  F+ KLN +RL  +   ++        A     Q + +   +   EA LL  M+I  LK R+G   ++EV+AT+   K ++E L GA+ +V++SYY+ A +Y+  +GP + FYK+ALMFLAYT  + +   E++ LAV+IS+AALTGDGVFNFGEVLATPIL  L  T   WLSDLL  F+ GD+D+F ++V  + + + +QPAL ++QE++KEKV LL+LM LVF+ PSHER IPF  +A   R+ +EQVEWL+MRA+S  LIKG I++V   V V+WVQPRVL+  Q+++L  RL GW  KV+ TL YVE QTPELF
Sbjct:    1 MTDFIATEQAAYPDIAQRYQRLKDLHVRKLYHELTGELEAFVRDPACHKYPLNLPKLYQEFIRSFQDKLNQIRLVVICTEISTQFADPAKAQEFMEQLLGQLSTKTAHEAVLLCKMQIAQLKFRRGAEFLAEVKATVDDDKQLIESLVGAEPVVHASYYRVACDYYGALGPADKFYKNALMFLAYTQYDEMRPNERFDLAVNISIAALTGDGVFNFGEVLATPILRALEGTDKQWLSDLLHAFNKGDIDRFNEIVGQNSKEFNAQPALVSKQEYVKEKVALLALMVLVFQRPSHERNIPFHEIAEATRLPLEQVEWLVMRALSCKLIKGSIDQVDGIVRVTWVQPRVLDNSQLQELVTRLDGWEKKVNSTLLYVEEQTPELF 382          
BLAST of NO29G01120 vs. NCBI_GenBank
Match: ETK75876.1 (hypothetical protein L915_17579 [Phytophthora parasitica])

HSP 1 Score: 345.1 bits (884), Expect = 3.600e-91
Identity = 182/382 (47.64%), Postives = 253/382 (66.23%), Query Frame = 0
Query:  120 MTEYIQTAIAAAPDLQEPLSQLGDLHARKLWHQLTDALLTFLKD-SSRAQQVDCRGLYDNFICKFETKLNPLRLAAVTAAVAKALLPDVDAARTFLQNVAEKRERLGREAALLIDMEIVMLKLRQGD--MSEVEATLKAAKSVLEGLAGADAIVYSSYYKAASEYHKVVGPPEAFYKDALMFLAYTPLESLPVEEQYTLAVDISLAALTGDGVFNFGEVLATPILSVLSQTPHAWLSDLLQVFDAGDVDKFAQLVETHREAYFSQPALANRQEFIKEKVVLLSLMNLVFETPSHERTIPFTTVATRGRIGVEQVEWLLMRAMSLGLIKGVIEEVAQEVSVSWVQPRVLNQEQVRQLAGRLAGWSGKVSETLGYVEGQTPELF 499
            MT++I    AA PD+ +   +L DLH RKL+H+LT  L  F++D        +   LY  FI  F+ KLN +RL  +   ++        A     Q + +   +   EA LL  M+I  LK R+G   ++EV+AT+   K V+EGL GA+ +V+++YY+ A +Y+  +GP + FYK+ALMFLAYT  + + + E++ LAV+IS+AALTGDGVFNFGEVLATPIL  L  T   WLSDLL  F+ GD+D+F ++V  + + + +QPAL ++QE++KEKV LL+LM LVF+ PSHER IPF  +A   R+ +EQVEWL+MRA+S  LIKG I++V   V V+WVQPRVL+  Q+++L  RL GW  KV+ TL YVE QTPELF
Sbjct:    1 MTDFIAKEQAAYPDIAQRYQKLKDLHVRKLYHELTGELEAFVRDPMCHKHPQNLTRLYQEFIRPFQDKLNQIRLVVICTEISTQFADPAKAQEFMEQLLGQLSTKTAHEAVLLCKMQIAQLKFRRGADFLAEVKATVDDDKQVIEGLVGAEPVVHAAYYRVACDYYGALGPADKFYKNALMFLAYTQYDEMRLNERFDLAVNISIAALTGDGVFNFGEVLATPILRALEGTDKQWLSDLLHAFNKGDIDRFNEIVGQNSKEFNAQPALVSKQEYVKEKVALLALMVLVFQRPSHERNIPFHEIAEATRLPLEQVEWLVMRALSCKLIKGSIDQVDGIVRVTWVQPRVLDNSQLQELVTRLDGWEKKVNSTLLYVEEQTPELF 382          
BLAST of NO29G01120 vs. NCBI_GenBank
Match: OWZ04767.1 (26S proteasome non-ATPase regulatory protein [Phytophthora megakarya])

HSP 1 Score: 344.7 bits (883), Expect = 4.700e-91
Identity = 181/382 (47.38%), Postives = 254/382 (66.49%), Query Frame = 0
Query:  120 MTEYIQTAIAAAPDLQEPLSQLGDLHARKLWHQLTDALLTFLKD-SSRAQQVDCRGLYDNFICKFETKLNPLRLAAVTAAVAKALLPDVDAARTFLQNVAEKRERLGREAALLIDMEIVMLKLRQGD--MSEVEATLKAAKSVLEGLAGADAIVYSSYYKAASEYHKVVGPPEAFYKDALMFLAYTPLESLPVEEQYTLAVDISLAALTGDGVFNFGEVLATPILSVLSQTPHAWLSDLLQVFDAGDVDKFAQLVETHREAYFSQPALANRQEFIKEKVVLLSLMNLVFETPSHERTIPFTTVATRGRIGVEQVEWLLMRAMSLGLIKGVIEEVAQEVSVSWVQPRVLNQEQVRQLAGRLAGWSGKVSETLGYVEGQTPELF 499
            MT++I    AA PD+ +   +L DLH RKL+H+LT  L  F++D       ++   LY  FI  F+ KLN +RL  +   ++K       A     Q + +   +   EA LL  M++  LK R+G   ++EV++T+   K V+E L GA+ +V+++YY+ A +Y+  +GP + FYK+ALMFLAYT  + +  +E++ LAV+IS+AALTGDGVFNFGEVLATPIL  L  T   WLSDLL  F+ GD+D+F ++V  + + + +QPAL ++QE++KEKV LL+LM LVF+ PSHER IPF  +A   R+ +EQVEWL+MRA+S  LIKG I+EV   V V+WVQPRVL+  Q+++L  RL GW  KV+ TL YVE QTPELF
Sbjct:    1 MTDFIAKEQAAYPDIAQRYQKLKDLHVRKLYHELTGELEAFVRDPMCHKYPLNLPTLYQEFIRSFQDKLNQIRLVVICTEISKQFADPAKAQEFMEQLLGQLSTKTAHEAVLLCKMQLAQLKFRRGTDFLAEVKSTVDDDKQVIESLVGAEPVVHAAYYRVACDYYGALGPADKFYKNALMFLAYTQYDEMRPDERFDLAVNISIAALTGDGVFNFGEVLATPILRALEGTDKQWLSDLLHAFNKGDIDRFNEIVGQNSKEFNAQPALVSKQEYVKEKVALLALMVLVFQRPSHERNIPFHEIAEVTRLPLEQVEWLVMRALSCKLIKGSIDEVDGIVRVTWVQPRVLDNSQLQELVTRLDGWEKKVNSTLVYVEEQTPELF 382          
BLAST of NO29G01120 vs. NCBI_GenBank
Match: ETM35776.1 (hypothetical protein L914_17373 [Phytophthora parasitica])

HSP 1 Score: 344.4 bits (882), Expect = 6.100e-91
Identity = 182/382 (47.64%), Postives = 252/382 (65.97%), Query Frame = 0
Query:  120 MTEYIQTAIAAAPDLQEPLSQLGDLHARKLWHQLTDALLTFLKD-SSRAQQVDCRGLYDNFICKFETKLNPLRLAAVTAAVAKALLPDVDAARTFLQNVAEKRERLGREAALLIDMEIVMLKLRQGD--MSEVEATLKAAKSVLEGLAGADAIVYSSYYKAASEYHKVVGPPEAFYKDALMFLAYTPLESLPVEEQYTLAVDISLAALTGDGVFNFGEVLATPILSVLSQTPHAWLSDLLQVFDAGDVDKFAQLVETHREAYFSQPALANRQEFIKEKVVLLSLMNLVFETPSHERTIPFTTVATRGRIGVEQVEWLLMRAMSLGLIKGVIEEVAQEVSVSWVQPRVLNQEQVRQLAGRLAGWSGKVSETLGYVEGQTPELF 499
            MT++I    AA PD+ +   +L DLH RKL+H+LT  L  F++D        +   LY  FI  F+ KLN +RL  +   ++        A     Q + +   +   EA LL  M+I  LK R+G   ++EV+AT+   K V+EGL GA+ +V+++YY+ A +Y+  +GP + FYK+ALMFLAYT  + +   E++ LAV+IS+AALTGDGVFNFGEVLATPIL  L  T   WLSDLL  F+ GD+D+F ++V  + + + +QPAL ++QE++KEKV LL+LM LVF+ PSHER IPF  +A   R+ +EQVEWL+MRA+S  LIKG I++V   V V+WVQPRVL+  Q+++L  RL GW  KV+ TL YVE QTPELF
Sbjct:    1 MTDFIAKEQAAYPDIAQRYQKLKDLHVRKLYHELTGELEAFVRDPMCHKHPQNLTRLYQEFIRPFQDKLNQIRLVVICTEISTQFADPAKAQEFMEQLLGQLSTKTAHEAVLLCKMQIAQLKFRRGADFLAEVKATVDDDKQVIEGLVGAEPVVHAAYYRVACDYYGALGPADKFYKNALMFLAYTQYDEMRPNERFDLAVNISIAALTGDGVFNFGEVLATPILRALEGTDKQWLSDLLHAFNKGDIDRFNEIVGQNSKGFNAQPALVSKQEYVKEKVALLALMVLVFQRPSHERNIPFHEIAEATRLPLEQVEWLVMRALSCKLIKGSIDQVDGIVRVTWVQPRVLDNSQLQELVTRLDGWEKKVNSTLLYVEEQTPELF 382          
BLAST of NO29G01120 vs. NCBI_GenBank
Match: XP_008912671.1 (hypothetical protein PPTG_16668 [Phytophthora parasitica INRA-310] >ETI35636.1 hypothetical protein F443_18057 [Phytophthora parasitica P1569] >ETL29314.1 hypothetical protein L916_17472 [Phytophthora parasitica] >ETL82529.1 hypothetical protein L917_17312 [Phytophthora parasitica] >ETN01990.1 hypothetical protein PPTG_16668 [Phytophthora parasitica INRA-310] >ETO64371.1 hypothetical protein F444_18081 [Phytophthora parasitica P1976] >ETP05449.1 hypothetical protein F441_17936 [Phytophthora parasitica CJ01A1] >ETP33585.1 hypothetical protein F442_17901 [Phytophthora parasitica P10297] >KUF72227.1 26S proteasome non-ATPase regulatory subunit 13 [Phytophthora nicotianae] >KUF87694.1 FACT complex subunit spt16 [Phytophthora nicotianae] >KUF88900.1 26S proteasome non-ATPase regulatory subunit 13 [Phytophthora nicotianae])

HSP 1 Score: 344.0 bits (881), Expect = 8.000e-91
Identity = 182/382 (47.64%), Postives = 252/382 (65.97%), Query Frame = 0
Query:  120 MTEYIQTAIAAAPDLQEPLSQLGDLHARKLWHQLTDALLTFLKD-SSRAQQVDCRGLYDNFICKFETKLNPLRLAAVTAAVAKALLPDVDAARTFLQNVAEKRERLGREAALLIDMEIVMLKLRQGD--MSEVEATLKAAKSVLEGLAGADAIVYSSYYKAASEYHKVVGPPEAFYKDALMFLAYTPLESLPVEEQYTLAVDISLAALTGDGVFNFGEVLATPILSVLSQTPHAWLSDLLQVFDAGDVDKFAQLVETHREAYFSQPALANRQEFIKEKVVLLSLMNLVFETPSHERTIPFTTVATRGRIGVEQVEWLLMRAMSLGLIKGVIEEVAQEVSVSWVQPRVLNQEQVRQLAGRLAGWSGKVSETLGYVEGQTPELF 499
            MT++I    AA PD+ +   +L DLH RKL+H+LT  L  F++D        +   LY  FI  F+ KLN +RL  +   ++        A     Q + +   +   EA LL  M+I  LK R+G   ++EV+AT+   K V+EGL GA+ +V+++YY+ A +Y+  +GP + FYK+ALMFLAYT  + +   E++ LAV+IS+AALTGDGVFNFGEVLATPIL  L  T   WLSDLL  F+ GD+D+F ++V  + + + +QPAL ++QE++KEKV LL+LM LVF+ PSHER IPF  +A   R+ +EQVEWL+MRA+S  LIKG I++V   V V+WVQPRVL+  Q+++L  RL GW  KV+ TL YVE QTPELF
Sbjct:    1 MTDFIAKEQAAYPDIAQRYQKLKDLHVRKLYHELTGELEAFVRDPMCHKHPQNLTRLYQEFIRPFQDKLNQIRLVVICTEISTQFADPAKAQEFMEQLLGQLSTKTAHEAVLLCKMQIAQLKFRRGADFLAEVKATVDDDKQVIEGLVGAEPVVHAAYYRVACDYYGALGPADKFYKNALMFLAYTQYDEMRPNERFDLAVNISIAALTGDGVFNFGEVLATPILRALEGTDKQWLSDLLHAFNKGDIDRFNEIVGQNSKEFNAQPALVSKQEYVKEKVALLALMVLVFQRPSHERNIPFHEIAEATRLPLEQVEWLVMRALSCKLIKGSIDQVDGIVRVTWVQPRVLDNSQLQELVTRLDGWEKKVNSTLLYVEEQTPELF 382          
BLAST of NO29G01120 vs. NCBI_GenBank
Match: GAX96776.1 (26S proteasome non-ATPase regulatory subunit 13, putative, partial [Pythium insidiosum])

HSP 1 Score: 344.0 bits (881), Expect = 8.000e-91
Identity = 184/384 (47.92%), Postives = 256/384 (66.67%), Query Frame = 0
Query:  120 MTEYIQTAIAAAPDLQEPLSQLGDLHARKLWHQLTDALLTFLKDSS--RAQQVDCRGLYDNFICKFETKLNPLRLAAVTAAVAKALLPDVDAARTFLQNVAEKRE-RLGREAALLIDMEIVMLKLRQGD--MSEVEATLKAAKSVLEGLAGADAIVYSSYYKAASEYHKVVGPPEAFYKDALMFLAYTPLESLPVEEQYTLAVDISLAALTGDGVFNFGEVLATPILSVLSQTPHAWLSDLLQVFDAGDVDKFAQLVETHREAYFSQPALANRQEFIKEKVVLLSLMNLVFETPSHERTIPFTTVATRGRIGVEQVEWLLMRAMSLGLIKGVIEEVAQEVSVSWVQPRVLNQEQVRQLAGRLAGWSGKVSETLGYVEGQTPELF 499
            MT+++    AA PD+      L DLH RKL+H+LT  L  F+KD S  +A   +   LY+ FI  F+ KLN +RL  +   ++     D   ++ FL  +    E +   EAALL  M++   +LR+G    + V+ TL+  K V+E L GA+ +V+S+YY+ A +Y+   GP   FYK+ALM+LAYT  E +P +E++ LAV+IS+AALTGDGVFNFGEV+ATPIL  L  T   WLS+LL  F+ GD+DKF +++  H   Y +QPALA ++E+IKEKV LL+LM L+F+ PSHER + F+ +A   R+ ++QVEWL+MRA+SL LI+G I++V   V VSWVQPRVL+  Q+++L GRL  W+ KVS TL YVE QTPELF
Sbjct:    1 MTDFLSREQAAYPDIAARYQTLKDLHTRKLYHELTGELEAFVKDPSCRKASPPNLPKLYNEFIKSFQDKLNAIRLVLICTEIS-TQFADAAQSQDFLATLETHLETKKQHEAALLCKMQVAKWQLRRGPEFFAAVKTTLEEQKPVIEALVGAEPVVHSAYYRVACDYYGARGPANLFYKNALMYLAYTQYEEMPTQERFDLAVNISIAALTGDGVFNFGEVIATPILRALEGTEKQWLSELLHAFNKGDIDKFNEIIGRHAAEYDAQPALATKREYIKEKVALLALMVLIFQRPSHERNLSFSEIAEVTRLPLDQVEWLVMRALSLKLIRGAIDQVDGIVRVSWVQPRVLDNSQLQELVGRLGDWTKKVSSTLLYVEEQTPELF 383          
BLAST of NO29G01120 vs. NCBI_GenBank
Match: XP_002908651.1 (26S proteasome non-ATPase regulatory subunit 13, putative [Phytophthora infestans T30-4] >EEY57465.1 26S proteasome non-ATPase regulatory subunit 13, putative [Phytophthora infestans T30-4])

HSP 1 Score: 343.2 bits (879), Expect = 1.400e-90
Identity = 180/382 (47.12%), Postives = 252/382 (65.97%), Query Frame = 0
Query:  120 MTEYIQTAIAAAPDLQEPLSQLGDLHARKLWHQLTDALLTFLKD-SSRAQQVDCRGLYDNFICKFETKLNPLRLAAVTAAVAKALLPDVDAARTFLQNVAEKRERLGREAALLIDMEIVMLKLRQGD--MSEVEATLKAAKSVLEGLAGADAIVYSSYYKAASEYHKVVGPPEAFYKDALMFLAYTPLESLPVEEQYTLAVDISLAALTGDGVFNFGEVLATPILSVLSQTPHAWLSDLLQVFDAGDVDKFAQLVETHREAYFSQPALANRQEFIKEKVVLLSLMNLVFETPSHERTIPFTTVATRGRIGVEQVEWLLMRAMSLGLIKGVIEEVAQEVSVSWVQPRVLNQEQVRQLAGRLAGWSGKVSETLGYVEGQTPELF 499
            MT++I    AA PD+ +   +L DLH RKL+H+LT  L  F++D        +   LY  FI  F+ KLN +RL  +   ++        A     Q + +   +   EA LL  M+I  LK R+G   +++V+AT+   K V+EGL GA+ +V+++YY+ A +Y+  +GP + FYK+ALMFLAYT  + +   E++ LAV+IS+AALTGDGVFNFGEVLATPIL  L  T   WLSDLL  F+ GD+D+F ++V  + + + +QPAL ++QE++KEKV LL+LM LVF+ PSHER IPF  +A   R+ +EQVEWL+MRA+S  LIKG +++V   V V+WVQPRVL+  Q+++L  RL GW  KV+ TL YVE QTPELF
Sbjct:    1 MTDFIAKEQAAYPDIAQRYQKLKDLHVRKLYHELTGELEAFVRDPMCHKHPQNLAKLYQEFIRPFQDKLNQIRLVVICTEISTQFADPAKAQEFMEQLLGQLSTKTAHEAVLLCKMQIAQLKFRRGADFLAQVKATVDDDKQVVEGLVGAEPVVHAAYYRVACDYYSALGPADKFYKNALMFLAYTQYDEMRPNERFDLAVNISIAALTGDGVFNFGEVLATPILRALENTDKQWLSDLLHAFNKGDIDRFNEIVGQNSKEFNAQPALVSKQEYVKEKVALLALMVLVFQRPSHERNIPFHEIAEATRLPLEQVEWLVMRALSCKLIKGSLDQVDGIVRVTWVQPRVLDNSQLQELVTRLDGWEKKVNSTLLYVEEQTPELF 382          
BLAST of NO29G01120 vs. NCBI_GenBank
Match: POM73257.1 (26S proteasome non-ATPase regulatory subunit 13 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 340.1 bits (871), Expect = 1.200e-89
Identity = 180/382 (47.12%), Postives = 252/382 (65.97%), Query Frame = 0
Query:  120 MTEYIQTAIAAAPDLQEPLSQLGDLHARKLWHQLTDALLTFLKD-SSRAQQVDCRGLYDNFICKFETKLNPLRLAAVTAAVAKALLPDVDAARTFLQNVAEKRERLGREAALLIDMEIVMLKLRQGD--MSEVEATLKAAKSVLEGLAGADAIVYSSYYKAASEYHKVVGPPEAFYKDALMFLAYTPLESLPVEEQYTLAVDISLAALTGDGVFNFGEVLATPILSVLSQTPHAWLSDLLQVFDAGDVDKFAQLVETHREAYFSQPALANRQEFIKEKVVLLSLMNLVFETPSHERTIPFTTVATRGRIGVEQVEWLLMRAMSLGLIKGVIEEVAQEVSVSWVQPRVLNQEQVRQLAGRLAGWSGKVSETLGYVEGQTPELF 499
            MT++I    AA PD+ +   +L DLH RKL+H+LT  L  F++D       ++   LY  FI  F+ KLN +RL  +   ++        A     Q + +   +   EA LL  M+I  LK R+G   +++V+AT+   K V+E L GA+ +V+++YY+ A +Y+  +GP + FYK+ALMFLAYT  + +   E++ LAV+IS+AALTGDGVFNFGEVLATPIL  L  T   WLSDLL  F+ GD+D+F ++V  + + + +QPAL ++QE++KEKV LL+LM LVF+ PSHER IPF  +A   R+ +EQVEWL+MRA+S  LIKG I++V   V V+WVQPRVL+  Q+++L  RL GW  KV+ TL YVE QTPELF
Sbjct:    1 MTDFIAKEQAAYPDIAQRYQKLKDLHVRKLYHELTGELEAFVRDPMCHKYPLNLPTLYQEFIRNFQDKLNQIRLVVICTEISTQFADPAKAQEFMEQLLGQLSTKSAHEAVLLCKMQIAQLKFRRGADFLADVKATVDEDKQVIESLVGAEPVVHAAYYRVACDYYGALGPADKFYKNALMFLAYTQYDEMRPNERFDLAVNISIAALTGDGVFNFGEVLATPILRALEGTDKHWLSDLLHAFNKGDIDRFNEIVGQNSKEFNAQPALVSKQEYVKEKVALLALMVLVFQRPSHERNIPFHEIAEVTRLPLEQVEWLVMRALSCKLIKGSIDQVDGIVRVTWVQPRVLDNSQLQELVTRLDGWEKKVNSTLLYVEEQTPELF 382          
The following BLAST results are available for this feature:
BLAST of NO29G01120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21321.18.100e-16880.7926s proteasome non-atpase regulatory subunit 13 [N... [more]
CBJ31774.17.200e-10051.3226S proteasome subunit like protein [Ectocarpus si... [more]
XP_009519788.12.700e-9147.64hypothetical protein PHYSODRAFT_554654 [Phytophtho... [more]
ETK75876.13.600e-9147.64hypothetical protein L915_17579 [Phytophthora para... [more]
OWZ04767.14.700e-9147.3826S proteasome non-ATPase regulatory protein [Phyt... [more]
ETM35776.16.100e-9147.64hypothetical protein L914_17373 [Phytophthora para... [more]
XP_008912671.18.000e-9147.64hypothetical protein PPTG_16668 [Phytophthora para... [more]
GAX96776.18.000e-9147.9226S proteasome non-ATPase regulatory subunit 13, p... [more]
XP_002908651.11.400e-9047.1226S proteasome non-ATPase regulatory subunit 13, p... [more]
POM73257.11.200e-8947.1226S proteasome non-ATPase regulatory subunit 13 [P... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL061nonsL061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005235NSK005235Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G01120.1NO29G01120.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|601445gene_8287Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100214g13gene9095Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G01120.1NO29G01120.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G01120 ID=NO29G01120|Name=NO29G01120|organism=Nannochloropsis oceanica|type=gene|length=1987bp
ATGTCCCGGCCTCGAGCGGGATACATCTTGCACTTGTGGAGGGTAACGGG
CGAGGTGATCGGAAGAAGGGGCATGGGCGGAGGGAAGACTGAAGGAGCAG
AGGGAGAAGGTTTATTCGAGGACGGTGGGGAGCAAAATGAGGAGGAAGGT
GGAGAGGAGGAGTACGCATCCTTGTTCATGGCTAgtgcggccacttatga
agtggtgtatgacggccgcaggaagagggccgcacgatgggaaggaggtt
gacggaggatggagcagcagcgtccgaaatgcttttcgaatagagcctgc
cggcaaagcagtaatttcggtcgttttgttgctactttttcagctctagc
ttcctgtgtgcatgagtggcggaggagaagatgtgagagagcgtgccaaa
acatgcaaggttagacgtacagaggctctaggcaagagcgtcctcctcaa
ggcgcgagaagcaggccttgcttcacccaactcgaggcccctgaccgttg
ccccacgcaggcttaaatcccaaatcacgtacatgctccccactttgttc
tacacttccaagCCATCGACATCCTGAAACTTGCGGGGAAAGCGCGGGCA
CCGGGCAACGCAGAGCAGTCGCTGAAAACgtgcgtgcggagaattcgagg
aacccgccgcctttttcatccgtagcagcaccaccacaccacactcagga
gacttacgccctgccctcatttccaccacttgaaacagTACTTTGTCACG
ACTGAACCCGGGCTCGTTCGTTTTTCGCCTCTACAAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAAGAGCAAGCAATGACG
GAGTACATCCAAACAGCCATCGCCGCCGCCCCGGACTTGCAAGAGCCCTT
GAGCCAGCTCGGGGACTTGCACGCCCGCAAGCTCTGGCACCAGCTCACGG
ACGCCTTGCTCACCTTTTTGAAGGACTCAAGTCGTGCCCAGCAAGTGGAC
TGCCGGGGCTTATATGACAATTTTATCTGCAAGTTCGAAACGAAGCTCAA
CCCTTTGCGTCTTGCCGCTGTGACCGCCGCTGTCGCCAAGGCCCTCTTGC
CTGATGTGGATGCGGCCCGCACCTTCTTGCAGAACGTGGCGGAAAAACGT
GAGCGATTGGGGCGAGAGGCTGCTTTGCTAATCGATATGGAGATTGTGAT
GCTCAAACTTCGACAGGGAGATATGTCCGAGGTAGAGGCGACTTTGAAGG
CAGCCAAAAGCGTGTTGGAGGGCCTGGCAGGTGCGGATGCCATTGTATAT
TCATCCTATTATAAGGCAGCGTCGGAGTACCACAAGGTCGTGGGCCCGCC
CGAGGCGTTTTACAAGGATGCGTTGATGTTCTTGGCTTACACGCCTCTGG
AAAGCCTGCCGGTGGAAGAGCAATACACGCTTGCCGTAGACATCTCTCTC
GCGGCACTGACGGGGGATGGCGTGTTTAATTTTGGGGAGGTCTTGGCGAC
GCCTATTTTGAGTGTGTTGTCCCAGACGCCGCATGCGTGGTTGTCTGACT
TGCTGCAAGTGTTTGATGCGGGGGATGTCGATAAATTCGCTCAATTGGTG
GAGACTCACCGGGAAGCTTACTTCTCGCAGCCGGCTCTAGCGAATCGCCA
AGAATTCATCAAGGAGAAGGTGGTGCTGCTCTCGTTGATGAATTTGGTGT
TTGAGACTCCGTCTCATGAGAGGACGATTCCGTTTACCACGGTGGCGACC
CGAGGACGGATTGGGGTGGAGCAGGTGGAGTGGTTGTTGATGCGGGCCAT
GTCCTTGGGCTTAATTAAGGGGGTTATTGAGGAAGTCGCGCAGGAGGTGA
GCGTGTCGTGGGTGCAGCCGCGGGTGCTGAACCAGGAGCAGGTGCGGCAG
CTGGCAGGGAGGCTGGCGGGCTGGAGTGGGAAGGTGTCGGAGACATTGGG
TTACGTGGAGGGGCAGACGCCTGAGTTGTTCAATTAA
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protein sequence of NO29G01120.1

>NO29G01120.1-protein ID=NO29G01120.1-protein|Name=NO29G01120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=500bp
MSRPRAGYILHLWRVTGEVIGRRGMGGGKTEGAEGEGLFEDGGEQNEEEG
GEEEYASLFMATIDILKLAGKARAPGNAEQSLKTTLSRLNPGSFVFRLYK
QQQQQQQQQQQQQRQQEQAMTEYIQTAIAAAPDLQEPLSQLGDLHARKLW
HQLTDALLTFLKDSSRAQQVDCRGLYDNFICKFETKLNPLRLAAVTAAVA
KALLPDVDAARTFLQNVAEKRERLGREAALLIDMEIVMLKLRQGDMSEVE
ATLKAAKSVLEGLAGADAIVYSSYYKAASEYHKVVGPPEAFYKDALMFLA
YTPLESLPVEEQYTLAVDISLAALTGDGVFNFGEVLATPILSVLSQTPHA
WLSDLLQVFDAGDVDKFAQLVETHREAYFSQPALANRQEFIKEKVVLLSL
MNLVFETPSHERTIPFTTVATRGRIGVEQVEWLLMRAMSLGLIKGVIEEV
AQEVSVSWVQPRVLNQEQVRQLAGRLAGWSGKVSETLGYVEGQTPELFN*
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Synonyms
Publications