NO29G01110, NO29G01110 (gene) Nannochloropsis oceanica

Overview
NameNO29G01110
Unique NameNO29G01110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length912
Alignment locationchr29:367684..368595 -

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Properties
Property NameValue
DescriptionSulfotransferase 1c2a
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:367684..368595 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008146sulfotransferase activity
GO:0016740transferase activity
GO:0008146sulfotransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR000863Sulfotransferase_dom
Homology
BLAST of NO29G01110 vs. NCBI_GenBank
Match: EWM21324.1 (sulfotransferase 1c2a [Nannochloropsis gaditana])

HSP 1 Score: 209.9 bits (533), Expect = 1.100e-50
Identity = 121/251 (48.21%), Postives = 149/251 (59.36%), Query Frame = 0
Query:   46 PCYLYLVRDGRDVCVSFYHHLKSMASDDGGYQGEFADFFEEWIEGRLPYGRWMDHVVSWLAREGGREXXXXXXXXXXXXXXXXYEKEGERKGRVLVVRYEDLKKDLMGGLKRIAKHCRISLRTRGREGAREGEVEKSTGDMKKGQEGARXXXXXXXXXXXXXXMWETVKEKCSFEYMVENRKMFEPRSVTWTDPAFRFIRKGEVGDHKVHFTEEQLRRFAGSVKEWFGEEG-----------GGGEGERRR 286
            PCYLY+VRDGRD CVSF+HH+KSMA +DGG++G+F+ FF+EW+EGRL YGRW DHV +W+ RE    XXXX                     RVLVVRYEDLK DL G LKRIA+HC I +      G   GE         KG+E                 +WE V+EKCSFEYM  NR+++EPRSVTW D +FRF+RKG VGD++  FTE+Q   FA +V+E   + G           GG E ER R
Sbjct:  187 PCYLYIVRDGRDACVSFFHHMKSMAKEDGGFEGDFSIFFQEWLEGRLAYGRWTDHVAAWMGRERXXXXXXXV--------------------RVLVVRYEDLKADLTGELKRIARHCGIDV------GGGIGE---------KGEE-----------------VWEAVREKCSFEYMATNRRVYEPRSVTWRDRSFRFMRKGAVGDYRQLFTEDQCVCFAEAVREAQRKSGQAEACLMRELLGGEEWERGR 385          
BLAST of NO29G01110 vs. NCBI_GenBank
Match: XP_002509199.1 (predicted protein [Micromonas commoda] >ACO70457.1 predicted protein [Micromonas commoda])

HSP 1 Score: 136.3 bits (342), Expect = 1.500e-28
Identity = 80/228 (35.09%), Postives = 112/228 (49.12%), Query Frame = 0
Query:   46 PCYLYLVRDGRDVCVSFYHHLKSMASDDGGYQGEFADFFEEWIEGRLPYGRWMDHVVSWLAREGGREXXXXXXXXXXXXXXXXYEKEGERKGRVLVVRYEDLKKDLMGGLKRIAKHCRISLRTRGREGAREGEVEKSTGDMKKGQEGARXXXXXXXXXXXXXXMWETVKEKCSFEYMVENRKMFEPRSVTWTDPAFRFIRKGEVGDHKVHFTEEQLRRFAGSVKEWFG 274
            P Y+Y+VRDGRD  VSFYHHL S A +DGGY   +  FF+EWIEG++ +G W +H+ SW                         +  G+    VLVVRYED+K +L   +KR+A H               G  + S  D+ +                        +  +CSF+ M +    F+P+SV W++P + F+RKGEVGD +V FT EQ  RF   ++E FG
Sbjct:  321 PRYVYVVRDGRDCAVSFYHHLSSQAPEDGGYAKGWNAFFDEWIEGKIAFGGWAEHLKSW-------------------------QVPGDFDPAVLVVRYEDMKNNLREVVKRVATH------------VLGGPCQVSEQDLYR------------------------IAARCSFDRMKKEIDRFQPKSVRWSNPDYCFLRKGEVGDWEVTFTAEQEERFQKKIEEVFG 487          
BLAST of NO29G01110 vs. NCBI_GenBank
Match: XP_003063735.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH52108.1 predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 131.7 bits (330), Expect = 3.800e-27
Identity = 78/229 (34.06%), Postives = 108/229 (47.16%), Query Frame = 0
Query:   48 YLYLVRDGRDVCVSFYHHLKSMASDDGGYQGEFADFFEEWIEGRLPYGRWMDHVVSWLAREGGREXXXXXXXXXXXXXXXXYEKEGERKGRVLVVRYEDLKKDLMGGLKRIAKHCRISLRTRGREGAREGEVEKSTGDMKKGQEGARXXXXXXXXXXXXXXMWETVKEKCSFEYMVENRKMFEPRSVTWTDPAFRFIRKGEVGDHKVHFTEEQLRRFAGSVKEWFGEEG 277
            Y+Y+ RDGRD  VSFYHHL++ + DDGG++G +  FFE WI+G++ +G W +HV+ W A  G                      EG     VL V YE+L +DL G +++IA H  ++     R G R  E +                              + +  KC F+ M  +   F+PRSV W DP + FIRKG VGDH+   T  Q   F     E FG +G
Sbjct:  107 YVYVYRDGRDAAVSFYHHLRNQSVDDGGFEGGWDRFFERWIDGQIAFGSWFEHVLGWGAAAG----------------------EG---ADVLAVGYEELVRDLRGVVEKIADHVLLNASPADR-GPRLTEAQ-----------------------------LDAIAAKCGFDAMKADVDRFQPRSVRWRDPEYCFIRKGVVGDHRTTMTAAQSAAFEAKAAEAFGPKG 280          
BLAST of NO29G01110 vs. NCBI_GenBank
Match: KOO25185.1 (hypothetical protein Ctob_010357, partial [Chrysochromulina sp. CCMP291])

HSP 1 Score: 100.9 bits (250), Expect = 7.100e-18
Identity = 69/239 (28.87%), Postives = 92/239 (38.49%), Query Frame = 0
Query:   48 YLYLVRDGRDVCVSFYHHLKSMASDDGGYQGEFADFFEEWIEGRLPYGRWMDHVVSWLAREGGREXXXXXXXXXXXXXXXXYEKEGERKGRVLVVRYEDLKKDLMGGLKRIAKHCRISLRTRGREGAREGEVEKSTGDMKKGQEGARXXXXXXXXXXXXXXMWETVKEKCSFEYMVENRKMFEPRSVTWT-----DPAFRFIRKGEVGDHKVHFTEEQLRRFAGSVKEWFGEEGGGGEG 282
            Y+Y+ R   D CVSFYHHL   A++DGG+ G   +F  EW  GR P+G W  H+ SWL      +                         RVLV+ YE+LK++    + R+  HC   L                  D +  Q                      +  + SFE+M  +   F+PRSV W         F FIR G VGD    F+  Q       +   F    GGGEG
Sbjct:  263 YVYMTRRAADACVSFYHHLAHQAAEDGGFDGTLDEFIVEWSAGRAPFGSWSAHLKSWLCGPAATDP------------------------RVLVISYEELKREPRACIGRVNAHCGFGL-----------------SDARLDQ----------------------LLPQFSFEWMRSHESQFQPRSVRWVRRPEDSEEFHFIRAGRVGDGAKAFSPAQRELLGAMLARTF----GGGEG 434          
BLAST of NO29G01110 vs. NCBI_GenBank
Match: OQX07287.1 (hypothetical protein BWK80_49660 [Desulfobacteraceae bacterium IS3])

HSP 1 Score: 93.6 bits (231), Expect = 1.100e-15
Identity = 59/232 (25.43%), Postives = 102/232 (43.97%), Query Frame = 0
Query:   48 YLYLVRDGRDVCVSFYHHLKSMASDDGGYQGEFADFFEEWIEGRLPYGRWMDHVVSWLAREGGREXXXXXXXXXXXXXXXXYEKEGERKGRVLVVRYEDLKKDLMGGLKRIAKHCRISLRTRGREGAREGEVEKSTGDMKKGQEGARXXXXXXXXXXXXXXMWETVKEKCSFEYMVENRKMFEPRSVTWTDPAFR---FIRKGEVGDHKVHFTEEQLRRFAGSVKEWFGEEG 277
            Y+Y++R+G+DV VSF+H  KS      G++G+F++FFE ++ G++ +G W +HV  WL                          E      +L++ YE+L +DL G L+RI + C   + +                                         +  + EKCSF +M ++   F+  + T  +  ++   F+RKGE+G  K + TEEQ + F    + + G+ G
Sbjct:  138 YIYVMRNGKDVAVSFFHFYKSHL----GFKGDFSEFFELFMRGKVQFGSWFEHVAGWL--------------------------EHRDNPNILLLEYENLIRDLEGCLRRIIQFCGFDVSSE---------------------------------------QFPEIMEKCSFAFMKKHESKFDHITATIWEKGYKQNDFLRKGEIGGAKTYMTEEQEKVFEQKTERYIGKFG 300          
BLAST of NO29G01110 vs. NCBI_GenBank
Match: XP_020892311.1 (sulfotransferase 1C2A-like [Exaiptasia pallida])

HSP 1 Score: 86.7 bits (213), Expect = 1.400e-13
Identity = 60/224 (26.79%), Postives = 102/224 (45.54%), Query Frame = 0
Query:   45 EPCYLYLVRDGRDVCVSFYHHLKSMASDDGGYQGEFADFFEEWIEGRLPYGRWMDHVVSWLAREGGREXXXXXXXXXXXXXXXXYEKEGERKGRVLVVRYEDLKKDLMGGLKRIAKHCRISLRTRGREGAREGEVEKSTGDMKKGQEGARXXXXXXXXXXXXXXMWETVKEKCSFEYMVENRKMF---EPRSVTWTDP-AFRFIRKGEVGDHKVHFTEEQLRRF 265
            +P Y+YL R+ +D  VS+YHH + +   + G    + +FFE +I+ R+ +G W DHV+ W A                                VL ++YED+KKDL   +++IAK         G++ + E                                M + + ++ +F  M +++  F   +P ++ W++P   +FIRKGEVGD K +FT+EQ ++F
Sbjct:  130 KPKYIYLARNPKDTAVSYYHHYRLLKLYEFGSDRTWDEFFEMFIDSRVQFGCWFDHVLGWWAHRD--------------------------DDXVLFLKYEDMKKDLPCAVQQIAKFL-------GKDLSPE--------------------------------MIQRIADQTTFTAMSDSKGRFYDGDPDAIKWSNPGTTKFIRKGEVGDWKNYFTDEQNQQF 288          
BLAST of NO29G01110 vs. NCBI_GenBank
Match: XP_011405253.2 (PREDICTED: sulfotransferase 1C2A-like [Amphimedon queenslandica])

HSP 1 Score: 85.9 bits (211), Expect = 2.400e-13
Identity = 63/221 (28.51%), Postives = 92/221 (41.63%), Query Frame = 0
Query:   48 YLYLVRDGRDVCVSFYHHLKSMASDDGGYQGEFADFFEEWIEGRLPYGRWMDHVVSWLAREGGREXXXXXXXXXXXXXXXXYEKEGERKGRVLVVRYEDLKKDLMGGLKRIAKHCRISLRTRGREGAREGEVEKSTGDMKKGQEGARXXXXXXXXXXXXXXMWETVKEKCSFEYM----VENRKMFEPRSVTWTDPAFRFIRKGEVGDHKVHFTEEQLRRF 265
            ++Y+ R+ +DV VS YHH + +   +  + G++  FFE ++EG+   G W DHV  W                                  +L +RYED+KKDL G +K I++     L             +++T                           E++ E+ SFE M    + N + FEP    + D    FIRKG VGD K HF EEQL RF
Sbjct:  118 FIYVARNPKDVAVSLYHHSRLLTHCE--FDGDWDCFFELFMEGKCEMGSWFDHVSDWWKHRDAE--------------------------NILFLRYEDMKKDLPGAVKSISQFMGYDL-------------DQAT--------------------------IESIAEQSSFESMKANPLANPQHFEPLKNNFKDTGGNFIRKGIVGDWKNHFNEEQLARF 271          
BLAST of NO29G01110 vs. NCBI_GenBank
Match: XP_019861933.1 (PREDICTED: sulfotransferase 1C4-like [Amphimedon queenslandica])

HSP 1 Score: 82.8 bits (203), Expect = 2.000e-12
Identity = 63/222 (28.38%), Postives = 95/222 (42.79%), Query Frame = 0
Query:   48 YLYLVRDGRDVCVSFYHHLKSMASDDGGYQGEFADFFEEWIEGRLPYGRWMDHVVSWLAREGGREXXXXXXXXXXXXXXXXYEKEGERKGRVLVVRYEDLKKDLMGGLKRIAKHCRISLRTRGREGAREGEVEKSTGDMKKGQEGARXXXXXXXXXXXXXXMWETVKEKCSFEYMVEN-----RKMFEPRSVTWTDPAFRFIRKGEVGDHKVHFTEEQLRRF 265
            Y+Y+ R+ +DV VS+Y+H K     D  + G++  FFE +++G +P+G W DHV+ W                          K+ E    +L + YEDLKKDL G +K IA+    SL                                          M E +  +C+F+ M +N       + E   VT ++ +  FIRKG +GD K HF++EQ  RF
Sbjct:  113 YIYIARNPKDVAVSYYYHAKRFTHFD--FTGDWNCFFEFFMKGEVPFGLWFDHVLEW-----------------------WKYKDAE---NILFLMYEDLKKDLSGSVKAIAQFMGYSL---------------------------------------DDAMIEKITRQCTFDSMKDNPLATYDSLPEAPEVTVSN-STPFIRKGVIGDWKNHFSDEQSARF 266          
BLAST of NO29G01110 vs. NCBI_GenBank
Match: XP_003391425.1 (PREDICTED: sulfotransferase 1C2A-like [Amphimedon queenslandica])

HSP 1 Score: 80.9 bits (198), Expect = 7.600e-12
Identity = 60/221 (27.15%), Postives = 90/221 (40.72%), Query Frame = 0
Query:   48 YLYLVRDGRDVCVSFYHHLKSMASDDGGYQGEFADFFEEWIEGRLPYGRWMDHVVSWLAREGGREXXXXXXXXXXXXXXXXYEKEGERKGRVLVVRYEDLKKDLMGGLKRIAKHCRISLRTRGREGAREGEVEKSTGDMKKGQEGARXXXXXXXXXXXXXXMWETVKEKCSFEYM----VENRKMFEPRSVTWTDPAFRFIRKGEVGDHKVHFTEEQLRRF 265
            ++Y+ R+ +DV VS YHH + +   +  + G++  FFE ++EG+   G W DHV  W      +                           +L ++YED+K+DL   +  I+K     L             +++T                           E + E+ SFE M    + N + FEP    + D    FIRKG VGD K HF EEQL RF
Sbjct:  118 FIYVARNPKDVAVSLYHHSRLLTHCE--FDGDWDCFFELFMEGKCEMGSWFDHVSDWWKHRDAK--------------------------NILFLKYEDMKRDLPAAVMSISKFMGYDL-------------DQAT--------------------------IENIAEQSSFESMKANPLANPQHFEPLKNNFKDTGGNFIRKGIVGDWKNHFNEEQLARF 271          
BLAST of NO29G01110 vs. NCBI_GenBank
Match: XP_020892312.1 (sulfotransferase 1C2A-like [Exaiptasia pallida] >KXJ18980.1 Sulfotransferase 1C2A [Exaiptasia pallida])

HSP 1 Score: 80.9 bits (198), Expect = 7.600e-12
Identity = 60/224 (26.79%), Postives = 97/224 (43.30%), Query Frame = 0
Query:   45 EPCYLYLVRDGRDVCVSFYHHLKSMASDDGGYQGEFADFFEEWIEGRLPYGRWMDHVVSWLAREGGREXXXXXXXXXXXXXXXXYEKEGERKGRVLVVRYEDLKKDLMGGLKRIAKHCRISLRTRGREGAREGEVEKSTGDMKKGQEGARXXXXXXXXXXXXXXMWETVKEKCSFEYMVENRKMF---EPRSVTWTDP-AFRFIRKGEVGDHKVHFTEEQLRRF 265
            +P Y+Y+ R+ +D+ VS YHH + M   + G    + +FF+ +I+ R+ YG W DHV+ W                                  VL ++YED+KKDL   +++IAK         G++ + E                                M + + ++ +F  M + +  F   EP      +P A +F+RKGEVGD K +FT+EQ R+F
Sbjct:  129 KPKYIYVARNPKDIAVSLYHHYRRMKHYEFGSDRTWDEFFKMFIDSRVEYGGWFDHVLGWWVHRD--------------------------DDNVLFLKYEDMKKDLPCSVQQIAKFL-------GKDLSPE--------------------------------MIQRIADQTTFTAMSDGKGRFYDGEPDGHKRRNPGATKFLRKGEVGDWKNYFTDEQNRQF 287          
The following BLAST results are available for this feature:
BLAST of NO29G01110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21324.11.100e-5048.21sulfotransferase 1c2a [Nannochloropsis gaditana][more]
XP_002509199.11.500e-2835.09predicted protein [Micromonas commoda] >ACO70457.1... [more]
XP_003063735.13.800e-2734.06predicted protein [Micromonas pusilla CCMP1545] >E... [more]
KOO25185.17.100e-1828.87hypothetical protein Ctob_010357, partial [Chrysoc... [more]
OQX07287.11.100e-1525.43hypothetical protein BWK80_49660 [Desulfobacterace... [more]
XP_020892311.11.400e-1326.79sulfotransferase 1C2A-like [Exaiptasia pallida][more]
XP_011405253.22.400e-1328.51PREDICTED: sulfotransferase 1C2A-like [Amphimedon ... [more]
XP_019861933.12.000e-1228.38PREDICTED: sulfotransferase 1C4-like [Amphimedon q... [more]
XP_003391425.17.600e-1227.15PREDICTED: sulfotransferase 1C2A-like [Amphimedon ... [more]
XP_020892312.17.600e-1226.79sulfotransferase 1C2A-like [Exaiptasia pallida] >K... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL061nonsL061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005233NSK005233Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G01110.1NO29G01110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|655351gene_8286Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100214g12gene9096Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G01110.1NO29G01110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G01110 ID=NO29G01110|Name=NO29G01110|organism=Nannochloropsis oceanica|type=gene|length=912bp
ATGCCCAAGCCGATACCGCAGGTCAGGGAAGAAAGGGAGGGAGGGGGTGA
CGATGGGGTACTTGTTGTTGGTACTGCAGATTCTAATAAGCAAAAGGAGG
AAGTGGACGACGAGGATGAGGAGGAGAAAGCCGAACCGTGTTACCTCTAT
CTCGTCCGAGACGGTCGTGACGTCTGTGTCTCGTTCTATCACCATTTGAA
AAGCATGGCGAGTGACGATGGTGGGTATCAAGGGGAATTCGCGGATTTTT
TCGAGGAATGGATAGAGGGAAGGCTGCCTTATGGGAGATGGATGGATCAC
GTTGTTTCCTGGTTGGCGAGGGAGGGAGGGAGGGAGGGAGAGGAGGAGGA
GGAAGAGGGGAAGCGGAAAGAGCATGATAGCAATTATGAGAAGGAGGGAG
AGAGGAAGGGGAGGGTGTTGGTGGTGAGGTATGAGGATTTGAAGAAAGAT
TTGATGGGCGGTTTGAAGAGGATTGCGAAGCACTGTCGGATCTCGTTGAG
GACGAGGGGGAGGGAGGGGGCCAGGGAGGGTGAGGTGGAGAAGTCGACAG
GAGATATGAAAAAAGGGCAGGAAGGAGCGAGGACGAAAGAAGAGGAGGAG
AAGAAGGAGGAGGAGGAGGATAGGATGTGGGAGACAGTTAAGGAGAAGTG
TTCATTTGAGTACATGGTGGAAAACAGGAAGATGTTTGAGCCGCGAAGTG
TGACCTGGACAGACCCCGCCTTTCGATTCATTCGGAAGGGGGAGGTTGGG
GACCATAAAGTACATTTCACGGAGGAGCAGCTGAGGAGGTTTGCGGGTTC
GGTAAAGGAATGGTTTGGGGAGGAGGGGGGTGGGGGAGAAGGGGAGAGAA
GGAGGGCACCGGTGCATGTGACCCAGATGTTGGAGAGTTGGGAGGGGTTT
TTGGACGTATAA
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protein sequence of NO29G01110.1

>NO29G01110.1-protein ID=NO29G01110.1-protein|Name=NO29G01110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=304bp
MPKPIPQVREEREGGGDDGVLVVGTADSNKQKEEVDDEDEEEKAEPCYLY
LVRDGRDVCVSFYHHLKSMASDDGGYQGEFADFFEEWIEGRLPYGRWMDH
VVSWLAREGGREGEEEEEEGKRKEHDSNYEKEGERKGRVLVVRYEDLKKD
LMGGLKRIAKHCRISLRTRGREGAREGEVEKSTGDMKKGQEGARTKEEEE
KKEEEEDRMWETVKEKCSFEYMVENRKMFEPRSVTWTDPAFRFIRKGEVG
DHKVHFTEEQLRRFAGSVKEWFGEEGGGGEGERRRAPVHVTQMLESWEGF
LDV*
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Synonyms
Publications