NO29G01080, NO29G01080 (gene) Nannochloropsis oceanica

Overview
NameNO29G01080
Unique NameNO29G01080
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1519
Alignment locationchr29:362496..364014 -

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Properties
Property NameValue
DescriptionDna rna-binding protein kin17
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:362496..364014 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR037321KIN17-like
IPR019447DNA/RNA-bd_Kin17_cons_domain
Homology
BLAST of NO29G01080 vs. NCBI_GenBank
Match: EWM21322.1 (dna rna-binding protein kin17 [Nannochloropsis gaditana])

HSP 1 Score: 426.4 bits (1095), Expect = 1.100e-115
Identity = 317/451 (70.29%), Postives = 346/451 (76.72%), Query Frame = 0
Query:    1 MPKAAAGTPKAIANKAKSKGLQRLRWYCQMCEKQCRDENGFKCHTMSESHLRQMRVYAENPTQVMEKFSSEFEENYLETLSRLHGTKRVPANQVYQELICNKTHIHMNATKWDALTTFIKYLGKKGLCLVDETEKGWFVQWIDREYLKRREEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGMEEGRTENWLMEGIVVKIVNKKIGGGKYYKQKGRVEKLLEGGFVGEICLTGEEGXXXXXXXXXGVRLRIDQEELETVIPAVGGRVLILNGKGKGREGEMVGLDVENYACAVRVR-GEREMVLKGVQYEDVCKVDRDWLRGGG 451
            MPKAAAGTPKAIANKAK+KGLQRLRWYCQMCEKQCRDENGFKCHTMSESHLRQMRVYAENPTQVMEKFS EFEE+YLE LSRLHGTKRVPANQVYQELICNKTHIHMNATKWD+LTTF+KYLGKKG+CLVDETEKGWFVQWIDREY+ RREE+                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                         XXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      RTE WL  GIVVKI+NK++GGG++YK+KGRVEKLLEGGFV E+CL G+           G R+RIDQEELETVIPA GG+V++LNG+G+G+EG ++GLD E YAC VR+R G+RE+VL+GV+YEDVCK DRDWL G G
Sbjct:   29 MPKAAAGTPKAIANKAKAKGLQRLRWYCQMCEKQCRDENGFKCHTMSESHLRQMRVYAENPTQVMEKFSQEFEESYLEALSRLHGTKRVPANQVYQELICNKTHIHMNATKWDSLTTFVKYLGKKGICLVDETEKGWFVQWIDREYMLRREEL-------------------------EKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEASRELKRGDGESKIVIGVHGDSGGGGIKRARVNVFEREEXXXXLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTEQWLARGIVVKIINKRLGGGRFYKKKGRVEKLLEGGFVAELCLLGD---------GEGGRVRIDQEELETVIPAPGGQVIVLNGRGRGKEGVLMGLDEERYACRVRLREGKREVVLEGVEYEDVCKFDRDWLLGEG 445          
BLAST of NO29G01080 vs. NCBI_GenBank
Match: CBN77981.1 (Antigenic determinant of recA protein [Ectocarpus siliculosus])

HSP 1 Score: 248.4 bits (633), Expect = 4.100e-62
Identity = 251/457 (54.92%), Postives = 304/457 (66.52%), Query Frame = 0
Query:    1 MPKAAAGTPKAIANKAKSKGLQRLRWYCQMCEKQCRDENGFKCHTMSESHLRQMRVYAENPTQVMEKFSSEFEENYLETLSRLHGTKRVPANQVYQELICNKTHIHMNATKWDALTTFIKYLGKKGLCLVDETEKGWFVQWIDR--------EYLKRRE------EIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGMEEGRTENWLMEGIVVKIVNKKIGGGKYYKQKGRVEKLLEGGFVGEICLTGEEGXXXXXXXXXGVRLRIDQEELETVIPAVGGRVLILNGKGKGREGEMVGLDVENYACAVRVRGERE---MVLKGVQYEDVCK 441
            MPK    TPKAI N+ K+KGL +LRWYC+MC KQCRDENGFKCH  SE HLRQMR++AENP  VM+++S +FE+ +L+ LSR HGTKRV A+ VY E I +KTH HMN+T W+ LT+F+ YLGK    +VDETEKGW++QW+DR        E   RRE      E                                                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      R + WL +GIVVK++NK++GGGKYYK+K R+ K++E  +VGE+ +              G RLR+DQ++LETVIPAVGG V+++NG+ +G    ++ LD E ++ +VR+  +      VL  V+YED+CK
Sbjct:    1 MPKHGFLTPKAIGNRIKAKGLCKLRWYCEMCVKQCRDENGFKCHQTSEGHLRQMRIFAENPEAVMKQYSEDFEKEFLDVLSRRHGTKRVRASLVYNEFIAHKTHTHMNSTHWETLTSFVLYLGKMKKAVVDETEKGWYIQWVDRDPRLLAMQEAAARREKSDLDDEEKQARAIEKQIQAAKARDDGRADTDAAAAGPTELRREEGQTSLRIGLKSRAQTFVPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKDYWLRQGIVVKVMNKRVGGGKYYKKKARLRKVVE-RYVGEVKMIDS-----------GDRLRVDQDDLETVIPAVGGEVVVVNGRCRGERATLLSLDTEAFSASVRITSDGPDLGTVLDKVEYEDICK 445          
BLAST of NO29G01080 vs. NCBI_GenBank
Match: XP_009035769.1 (hypothetical protein AURANDRAFT_58917 [Aureococcus anophagefferens] >EGB09728.1 hypothetical protein AURANDRAFT_58917 [Aureococcus anophagefferens])

HSP 1 Score: 248.4 bits (633), Expect = 4.100e-62
Identity = 156/445 (35.06%), Postives = 203/445 (45.62%), Query Frame = 0
Query:    1 MPKAAAGTPKAIANKAKSKGLQRLRWYCQMCEKQCRDENGFKCHTMSESHLRQMRVYAENPTQVMEKFSSEFEENYLETLSRLHGTKRVPANQVYQELICNKTHIHMNATKWDALTTFIKYLGKKGLCLVDETEKGWFVQWIDRE--YLKRREEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGMEEGRTENWLMEGIVVKIVNKKIGGGKYYKQKGRVEKLLEGGFVGEICLTGEEGXXXXXXXXXGVRLRIDQEELETVIPAVGGRVLILNGKGKGREGEMVGLDVENYACAVRVRG--EREMVLKGVQYEDVCKV 442
            MPK    +PKAI+N+ K+KGL +LRWYC+MC+K CRDENGFKCH  S+ HLRQMR++AENP  VM  +S+EFE NY+ETLSR HGTKRV AN VYQE I +K H+HMNATKW+ LT F+KYLGK G  LVDETEKGWFV WIDR+   L R+  +                                                                                                                                                             +E + ++WL   IVVK VN+K+  G YYK+KG V +L++  FV  + +              G  L++DQ++LETVIPAVG RV ILNG G+G    +V +DV++++ AV V     R +  +GV YEDV ++
Sbjct:    1 MPKHDFFSPKAISNRIKAKGLTKLRWYCEMCQKACRDENGFKCHQTSDGHLRQMRIFAENPNAVMHNYSTEFEANYVETLSRRHGTKRVHANVVYQEYIADKHHVHMNATKWETLTNFVKYLGKSGQALVDETEKGWFVAWIDRDPAALARQAALAKKRKHDMDDEERQRLEIKRRVKAGGGGDAAPEAGDMSERSAGDVKPSMLDELMQGQSSKTPP----------------------------------------------------------------------------------------------DEPKLDHWLHADIVVKCVNRKVADGAYYKKKGTVLRLVD-DFVAVVRMNDS-----------GDELQLDQDDLETVIPAVGKRVKILNGVGRGLVATLVAIDVDDFSVAVEVESGPRRGLARRGVDYEDVSRL 339          
BLAST of NO29G01080 vs. NCBI_GenBank
Match: XP_021962650.1 (DNA/RNA-binding protein KIN17-like [Folsomia candida] >OXA43925.1 DNA/RNA-binding protein KIN17 [Folsomia candida])

HSP 1 Score: 234.6 bits (597), Expect = 6.200e-58
Identity = 160/445 (35.96%), Postives = 218/445 (48.99%), Query Frame = 0
Query:    1 MPKAAAGTPKAIANKAKSKGLQRLRWYCQMCEKQCRDENGFKCHTMSESHLRQMRVYAENPTQVMEKFSSEFEENYLETLSRLHGTKRVPANQVYQELICNKTHIHMNATKWDALTTFIKYLGKKGLCLVDETEKGWFVQWIDR--EYLKRREEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGMEEGRTENWLMEGIVVKIVNKKIGGGKYYKQKGRVEKLLEGGFVGEICLTGEEGXXXXXXXXXGVRLRIDQEELETVIPAVGGRVLILNGKGKGREGEMVGLDVENYACAVRV-RGERE-MVLKGVQYEDVCKV 442
            MPKA AGTPK +ANK KSKGLQ+LRWYCQMCEKQCRDENGFKCHT SESH RQ+ ++AENP + +++FSSEF+  Y+E L R +GT+RV ANQVYQE I +K H+HMNATKW +LT+F+K+LG++G+C+VDETEKGWFV W+DR  E + R++                                                                                          XXXXXXXXX                                                            ++   + WL+EGIVVK++ K + G KYYKQKG V ++++  + G I L              G +L++DQ+ LETVIP+ G  V ILNG+ +G +  +  +D++ +A  +++  G  E  VLK + Y ++ KV
Sbjct:    1 MPKAEAGTPKWLANKMKSKGLQKLRWYCQMCEKQCRDENGFKCHTSSESHQRQLLLFAENPHRYLDEFSSEFKTGYVELLRRRYGTRRVNANQVYQEYISSKDHLHMNATKWLSLTSFVKWLGREGICVVDETEKGWFVTWVDREPETIARQQAAAKKRKMDKDDDERMSDFIAKQVERVGASGKDDATYSELQRDEDEKLSLKLNVVGSAKPKTEVAANPSVFKIPEIKFSSASSVRSFSSTXXXXXXXXXSALEELREEQERFKE---------------------------------------------KKFHKDYWLLEGIVVKVITKDL-GDKYYKQKGVVIQIID-KYAGVIKL-----------LETGHKLKLDQDHLETVIPSPGRTVRILNGEFRGSDAILKSVDMDKFAVKIQICSGSFEGKVLKDIGYAEISKV 387          
BLAST of NO29G01080 vs. NCBI_GenBank
Match: XP_018318227.1 (PREDICTED: DNA/RNA-binding protein KIN17 [Trachymyrmex zeteki] >KYQ60608.1 DNA/RNA-binding protein KIN17 [Trachymyrmex zeteki])

HSP 1 Score: 233.8 bits (595), Expect = 1.100e-57
Identity = 180/442 (40.72%), Postives = 225/442 (50.90%), Query Frame = 0
Query:    1 MPKAAAGTPKAIANKAKSKGLQRLRWYCQMCEKQCRDENGFKCHTMSESHLRQMRVYAENPTQVMEKFSSEFEENYLETLSRLHGTKRVPANQVYQELICNKTHIHMNATKWDALTTFIKYLGKKGLCLVDETEKGWFVQWIDR--EYLKRREEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGMEEGRTENWLMEGIVVKIVNKKIGGGKYYKQKGRVEKLLEGGFVGEICLTGEEGXXXXXXXXXGVRLRIDQEELETVIPAVGGRVLILNGKGKGREGEMVGLDVENYACAVRVRGEREMVLKGVQYEDVCK 441
            M K   GTPK IANK K+KGLQ+LRWYCQMC+KQCRDENGFKCHTMSESH RQ+ ++AEN  + M++FS EF + YL  L R  GT+RVPAN+VYQE I ++ HIHMNAT+W  LT F+K+LG+ G C+VDETEKGW++ +IDR  E L  +E                                                                                                                                XXXXXXXXXXXXXXXXXXXXXXXXXXXX   +   TE WL EG++VK+  K + G KYYK KG V+ +   GFVG++ L   E          G  +R+DQE LETVIPA+G  VLIL GK KG    +  L +E+Y+  V +  +++ +LK + YE VCK
Sbjct:    1 MGKHEVGTPKYIANKIKAKGLQKLRWYCQMCQKQCRDENGFKCHTMSESHHRQLLLFAENAHRYMDQFSREFSQGYLNLLKRQFGTRRVPANRVYQEYIADRGHIHMNATQWLTLTAFVKWLGRTGQCVVDETEKGWYITYIDRDPETLAAQER----------------------------------------------KAKKEKMDKDDEERLMDFIDKQIERAKQDTKDEEGETSKTPLMRPENDAPLILDIKLKPKPKLLPVLEIKQEKIKSEDNQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDPSATEGWLKEGLMVKVTTKSL-GDKYYKAKGVVQSIGTNGFVGKVKLKSPE-------EVNGHIIRLDQEYLETVIPAIGKEVLILWGKHKGMRAIVKKLHIEHYSIDVELEKDKQ-ILKKLPYEQVCK 387          
BLAST of NO29G01080 vs. NCBI_GenBank
Match: XP_017795712.1 (PREDICTED: DNA/RNA-binding protein KIN17 [Habropoda laboriosa] >KOC60045.1 DNA/RNA-binding protein KIN17 [Habropoda laboriosa])

HSP 1 Score: 233.0 bits (593), Expect = 1.800e-57
Identity = 150/442 (33.94%), Postives = 200/442 (45.25%), Query Frame = 0
Query:    1 MPKAAAGTPKAIANKAKSKGLQRLRWYCQMCEKQCRDENGFKCHTMSESHLRQMRVYAENPTQVMEKFSSEFEENYLETLSRLHGTKRVPANQVYQELICNKTHIHMNATKWDALTTFIKYLGKKGLCLVDETEKGWFVQWIDR--EYLKRREEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGMEEGRTENWLMEGIVVKIVNKKIGGGKYYKQKGRVEKLLEGGFVGEICLTGEEGXXXXXXXXXGVRLRIDQEELETVIPAVGGRVLILNGKGKGREGEMVGLDVENYACAVRVRGEREMVLKGVQYEDVCK 441
            M K   GTPK IANK K+KGLQ+LRWYCQMC+KQCRDENGFKCHTMSESH RQ+ ++A+N ++ M++FS EF + YL  L R  GT+RVPAN+VYQE I ++THIHMNAT W  LT F+K+LG+ G C+VDETEKGW+V +IDR  E L  +E+                                                                                                                                                              E+   E WL EG++VK++ K++ G KYYK KG V+K  +  FVG++ L   E             +++DQE LETVIPA+G  V+IL GK KG  G +  + VE+Y+  V++    + V++ + YE VCK
Sbjct:    1 MGKHEVGTPKYIANKIKAKGLQKLRWYCQMCQKQCRDENGFKCHTMSESHHRQLLLFADNASRYMDQFSREFSQGYLNLLKRQFGTRRVPANRVYQEYIADRTHIHMNATIWLTLTAFVKWLGRSGQCVVDETEKGWYVTYIDRDPETLAAQEKKAKKQKMDKDDEERMMEFIEKQVEKGQQEDSGLSETFKEPLTRPENDTPLVLEMKINKKPKLLPIIKQEKRSKSSISSESVSMISDIKHEELDDDYTDKETNSIKSEKLRSTF--------------------------------------------SEDDNEEGWLREGLMVKVITKRL-GDKYYKSKGVVQKTEKSNFVGKVKLKSPEEVQNHV-------IKLDQEYLETVIPAIGKEVMILWGKHKGMRGVVHKIYVEHYSIDVKL-DRNDTVVRKLPYEQVCK 389          
BLAST of NO29G01080 vs. NCBI_GenBank
Match: XP_011310209.1 (PREDICTED: DNA/RNA-binding protein KIN17 [Fopius arisanus])

HSP 1 Score: 232.6 bits (592), Expect = 2.300e-57
Identity = 170/443 (38.37%), Postives = 214/443 (48.31%), Query Frame = 0
Query:    1 MPKAAAGTPKAIANKAKSKGLQRLRWYCQMCEKQCRDENGFKCHTMSESHLRQMRVYAENPTQVMEKFSSEFEENYLETLSRLHGTKRVPANQVYQELICNKTHIHMNATKWDALTTFIKYLGKKGLCLVDETEKGWFVQWIDR--EYLKRREEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGMEEGRTENWLMEGIVVKIVNKKIGGGKYYKQKGRVEK-LLEGGFVGEICLTGEEGXXXXXXXXXGVRLRIDQEELETVIPAVGGRVLILNGKGKGREGEMVGLDVENYACAVRVRGEREMVLKGVQYEDVCK 441
            M K   GTPK IANK KSKGLQ+LRWYCQMCEKQCRDENGFKCHTMSESH RQ+ ++A+N  + M++FS EF   YL  L R  GT+RVPAN+VYQ+ I ++ H+HMNAT W +LT F+K+LG+ G C+VDETEKGWFV +IDR  E L  +E+                                                                                                                                            XXXXXXXXXXXXXXX    +  +  WL EG+VVKI+ K + G KYYK KG V+  +LE G+VG+I LT  E          G  +++DQE LETVIPA+G  VLI+ GK KG +G +  + VE Y+  V +  + E  LK + YE +CK
Sbjct:    1 MGKHEPGTPKYIANKIKSKGLQKLRWYCQMCEKQCRDENGFKCHTMSESHHRQLLLFADNAHKYMDQFSQEFSHGYLHLLKRQFGTRRVPANRVYQDYIADRGHVHMNATIWLSLTAFVKWLGRTGKCVVDETEKGWFVTYIDRDPETLALQEK-------------------------KAKKEKMDKDDEERMMDFIEKQVEQGRQEAVEALEDTPVPLQRCEDDGPLVLDLKLKVKPKLMGPPLAPAPRRGESSRDLRIKEEPQSEDESDRQSRAPSECRSEISVKRPHRTDXXXXXXXXXXXXXXXXSQGQSTSSGWLQEGLVVKIITKTL-GQKYYKAKGIVQSPVLEAGYVGKIKLTSPE-------EVEGHVVKLDQEHLETVIPAIGREVLIIQGKYKGSKGIIKKVRVEEYSVDVELLRD-ERYLKKLPYESICK 409          
BLAST of NO29G01080 vs. NCBI_GenBank
Match: XP_018337138.1 (PREDICTED: DNA/RNA-binding protein KIN17 [Trachymyrmex septentrionalis] >XP_018337139.1 PREDICTED: DNA/RNA-binding protein KIN17 [Trachymyrmex septentrionalis] >KYN42852.1 DNA/RNA-binding protein KIN17 [Trachymyrmex septentrionalis])

HSP 1 Score: 231.9 bits (590), Expect = 4.000e-57
Identity = 172/442 (38.91%), Postives = 218/442 (49.32%), Query Frame = 0
Query:    1 MPKAAAGTPKAIANKAKSKGLQRLRWYCQMCEKQCRDENGFKCHTMSESHLRQMRVYAENPTQVMEKFSSEFEENYLETLSRLHGTKRVPANQVYQELICNKTHIHMNATKWDALTTFIKYLGKKGLCLVDETEKGWFVQWIDR--EYLKRREEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGMEEGRTENWLMEGIVVKIVNKKIGGGKYYKQKGRVEKLLEGGFVGEICLTGEEGXXXXXXXXXGVRLRIDQEELETVIPAVGGRVLILNGKGKGREGEMVGLDVENYACAVRVRGEREMVLKGVQYEDVCK 441
            M K   GTPK IANK K+KGLQ+LRWYCQMC+KQCRDENGFKCHTMSESH RQ+ ++AEN  + M++FS EF + YL  L R  GT+RVPAN+VYQE I ++ HIHMNAT+W  LT F+K+LG+ G C+VDETEKGW++ +IDR  E L  +E                                                                                                                      XXXXXXXXXXXXXXXXXXXXX                    +    E WL EG++VK+  K + G KYYK KG V+ +   GFVG++ L   E          G  +R+DQE LETVIPA+G  VLIL GK KG    +  L VE+Y+  + ++ +++ +LK + YE VCK
Sbjct:    1 MGKHEVGTPKYIANKIKAKGLQKLRWYCQMCQKQCRDENGFKCHTMSESHHRQLLLFAENAHRYMDQFSREFSQGYLNLLKRQFGTRRVPANRVYQEYIADRGHIHMNATQWLTLTAFVKWLGRTGQCVVDETEKGWYITYIDRDPETLAAQER-------------------------------------------KAKKEKMDKDDEERLMDFIDKQIERAKQDTKDEKGETSKTPLMRPENDTPLVLDIKLKPKPKLLPVLEVKQEKIXXXXXXXXXXXXXXXXXXXXXLKRSIDDNKTESVKKLKSNDDPSTAEGWLREGLMVKVTTKSL-GDKYYKAKGVVQSIGTDGFVGKVKLKTPE-------EVNGHIIRLDQEYLETVIPAIGKEVLILWGKHKGMRAIVKKLHVEHYSIDIELKKDKQ-ILKKLPYEQVCK 390          
BLAST of NO29G01080 vs. NCBI_GenBank
Match: XP_012054336.1 (PREDICTED: DNA/RNA-binding protein KIN17 [Atta cephalotes] >XP_018046029.1 PREDICTED: DNA/RNA-binding protein KIN17 [Atta colombica])

HSP 1 Score: 230.7 bits (587), Expect = 8.900e-57
Identity = 160/442 (36.20%), Postives = 207/442 (46.83%), Query Frame = 0
Query:    1 MPKAAAGTPKAIANKAKSKGLQRLRWYCQMCEKQCRDENGFKCHTMSESHLRQMRVYAENPTQVMEKFSSEFEENYLETLSRLHGTKRVPANQVYQELICNKTHIHMNATKWDALTTFIKYLGKKGLCLVDETEKGWFVQWIDR--EYLKRREEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGMEEGRTENWLMEGIVVKIVNKKIGGGKYYKQKGRVEKLLEGGFVGEICLTGEEGXXXXXXXXXGVRLRIDQEELETVIPAVGGRVLILNGKGKGREGEMVGLDVENYACAVRVRGEREMVLKGVQYEDVCK 441
            M K   GTPK IANK K+KGLQ+LRWYCQMC+KQCRDENGFKCHTMSESH RQ+ ++AEN  + M++FS EF + YL  L R  GT+RVPAN+VYQE I ++ HIHMNAT+W  LT F+K+LG+ G C+VDETEKGW++ +IDR  E L  +E+                                                                                                                                      XXXXXXXX         XX         TE WL EG++VK+  K + G KYYK KG V+ +   GFVG++ L   E          G  +R+DQE LETVIPA+G  +LIL GK KG    +  L +E+Y+  V +  +++ +L+ + YE VCK
Sbjct:    1 MGKHEVGTPKYIANKIKAKGLQKLRWYCQMCQKQCRDENGFKCHTMSESHHRQLLLFAENAHRYMDQFSREFSQGYLNLLKRQFGTRRVPANRVYQEYIADRGHIHMNATQWLTLTAFVKWLGRTGQCVVDETEKGWYITYIDRDPETLAAQEK-------------------------------------------KAKKEKMDKDDEERLMDFIDKQIERAKQDTKDEMGETSKTPLMRSENDTPLVLDIKLKPKPKLLPVLEVKQEKIKSEDSQSKLVSSKSINEXXXXXXXXNDDNKTEFTXXLKSNDNPSATEGWLREGLMVKVTTKSL-GDKYYKAKGVVQSIGTDGFVGKVKLKTPE-------EVNGHIIRLDQEYLETVIPAIGKEILILWGKHKGMRAIVKKLHIEHYSIDVELEKDKQ-ILEKLPYEQVCK 390          
BLAST of NO29G01080 vs. NCBI_GenBank
Match: XP_012227745.1 (PREDICTED: DNA/RNA-binding protein KIN17 [Linepithema humile])

HSP 1 Score: 230.7 bits (587), Expect = 8.900e-57
Identity = 150/442 (33.94%), Postives = 197/442 (44.57%), Query Frame = 0
Query:    1 MPKAAAGTPKAIANKAKSKGLQRLRWYCQMCEKQCRDENGFKCHTMSESHLRQMRVYAENPTQVMEKFSSEFEENYLETLSRLHGTKRVPANQVYQELICNKTHIHMNATKWDALTTFIKYLGKKGLCLVDETEKGWFVQWIDR--EYLKRREEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGMEEGRTENWLMEGIVVKIVNKKIGGGKYYKQKGRVEKLLEGGFVGEICLTGEEGXXXXXXXXXGVRLRIDQEELETVIPAVGGRVLILNGKGKGREGEMVGLDVENYACAVRVRGEREMVLKGVQYEDVCK 441
            M K   GTPK IANK K+KGLQ+LRWYCQMC+KQCRDENGFKCHTMSESH RQ+ ++AEN  + M++FS EF + YL  L R  GTKRVPAN+VYQE I ++ H+HMNAT+W  LT ++K+LG+ G C+VDETEKGW+V +IDR  E L  +E+                                                                                                                                                                   E WL EG++VK++ K + G KYYK KG V+ + + GFVG++ L   E          G  +R+DQE LETVIPA+G  +LIL GK K R   +  L +E+Y+  V +  ++ +V K + YE VCK
Sbjct:    1 MGKHEVGTPKYIANKIKAKGLQKLRWYCQMCQKQCRDENGFKCHTMSESHHRQLLLFAENSHRYMDQFSREFSQGYLNLLKRQFGTKRVPANRVYQEYISDRGHVHMNATQWLTLTAYVKWLGRSGQCIVDETEKGWYVTYIDRDPETLAAQEK------------------------------------------KAKKEKMDKDDNERLMEFIGKQIERAKPDEKEEESETFKTPLIRPENNVPLVLDIKLKPKLNFLPVINIKQEKIKNENTNQDKSMLNKSVDEKDRKLKRVTDDTEMKSAKKLKSNNNSCPIEGWLKEGLMVKVITKNL-GNKYYKAKGVVQSIEKDGFVGKVKLKSPE-------EVSGHIIRLDQEYLETVIPAIGKEILILWGKYKDRRAIVKKLHIEHYSIDVELEEDKRIVEK-LSYEQVCK 391          
The following BLAST results are available for this feature:
BLAST of NO29G01080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21322.11.100e-11570.29dna rna-binding protein kin17 [Nannochloropsis gad... [more]
CBN77981.14.100e-6254.92Antigenic determinant of recA protein [Ectocarpus ... [more]
XP_009035769.14.100e-6235.06hypothetical protein AURANDRAFT_58917 [Aureococcus... [more]
XP_021962650.16.200e-5835.96DNA/RNA-binding protein KIN17-like [Folsomia candi... [more]
XP_018318227.11.100e-5740.72PREDICTED: DNA/RNA-binding protein KIN17 [Trachymy... [more]
XP_017795712.11.800e-5733.94PREDICTED: DNA/RNA-binding protein KIN17 [Habropod... [more]
XP_011310209.12.300e-5738.37PREDICTED: DNA/RNA-binding protein KIN17 [Fopius a... [more]
XP_018337138.14.000e-5738.91PREDICTED: DNA/RNA-binding protein KIN17 [Trachymy... [more]
XP_012054336.18.900e-5736.20PREDICTED: DNA/RNA-binding protein KIN17 [Atta cep... [more]
XP_012227745.18.900e-5733.94PREDICTED: DNA/RNA-binding protein KIN17 [Linepith... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL061nonsL061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005230NSK005230Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G01080.1NO29G01080.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|559338gene_8283Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100214g9gene9099Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G01080.1NO29G01080.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G01080 ID=NO29G01080|Name=NO29G01080|organism=Nannochloropsis oceanica|type=gene|length=1519bp
ATGCCCAAAGCCGCGGCCGGCACGCCCAAGGCCATTGCCAACAAAGCCAA
AAGCAAGGGCCTGCAACGTCTGCGATGGTACTGCCAAATGTGCGAGAAGC
AATGCCGGGATGAGAATGGGTTCAAGTGCCACACCATGTCCGAGAGCCAT
TTGCGACAGATGCGGGTGTACGCGGAGAATCCCACGCAGgtacgttgcca
ccttccctcccttccgttctctctccctccctcctttcttcgctctatcc
ttgcttgtgtgcgtgcatgcgtgaagggcaccatctcccccgtccacgcg
acactcaacatctcccctcgcttccaccctccctccctccctcccctagG
TGATGGAAAAATTTTCTTCAGAGTTCGAGGAGAATTATCTCGAGACCCTC
TCTCGGCTACATGGCACCAAGCGCGTCCCGGCTAACCAGGTCTATCAAGA
ACTGATCTGCAACAAGACACACATCCACATGAACGCGACCAAGTGGGACG
CCCTCACCACTTTCATCAAGTACCTAGGGAAGAAGGGCCTGTGCCTGGTA
GATGAAACGGAAAAGGGTTGGTTCGTCCAATGGATTGATCGGGAATACTT
GAAACGAAGGGAAGAAATCGAGAAGGCCAGGAAGGAGGAGGTAGAGGAAG
AGGTGCGATTGCAAAGGCTCATGGCGGCCAGGGCAGCAGCGGCGGCAGCA
GCTACGGGGGGGGAAAGGAAGGCAGAGGAAGAGGAGGAAGGGAAAAGGGA
GTTGAGGAGGGGGGAGGAGGAAGGGAGGATCGTGATTGGCGCGGGAAGGT
TAGGTGGAGGAGGAGAAGGAGGAGGACGAGGAGGTGGGGGTATTAAGAGA
CCAAGGCCAGTGGCGGCGACGGGCAATGTGTTTGGGGGTCAGGAGGAGGA
GGAGGAGGGGTGGAGGATGTCCATGAAGAAGAAGATGGTTGTGGGTGGTA
ATGGAGTAGGAGAGGGGGGAGGAGGGAAGAAAAGTGAACTGGAGAAACTG
ATGGAACAGGACACGGCGCGCAAGGCGGCAGAGGCGGCGGCTAGGAAGAA
AAGGGAAGAAGTGGAGGAGGAAATGGGGGATGGCGGGATGGAGGAGGGGC
GGACAGAGAACTGGTTGATGGAGGGAATAGTTGTAAAGATTGTGAATAAA
AAGATAGGAGGTGGAAAGTACTACAAGCAGAAGGGTCGGGTTGAGAAGCT
ACTGGAGGGAGGGTTTGTAGGCGAGATATGCCTGACGGGGGAGGAAGGAG
GGAGGGAGGGAGGAAGAGGAGGAGGAGGGGTGAGATTGCGGATCGATCAG
GAGGAGTTGGAGACGGTGATTCCGGCAGTGGGTGGAAGAGTGTTGATTTT
GAATGGCAAGGGGAAGGGGAGGGAAGGAGAAATGGTGGGGTTGGACGTGG
AGAACTATGCATGTGCGGTGCGGGTGCGAGGAGAGAGGGAGATGGTCTTG
AAGGGAGTGCAGTATGAGGATGTGTGTAAGGTGGATCGGGATTGGCTTCG
AGGGGGAGGAGGACGTTGA
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protein sequence of NO29G01080.1

>NO29G01080.1-protein ID=NO29G01080.1-protein|Name=NO29G01080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=453bp
MPKAAAGTPKAIANKAKSKGLQRLRWYCQMCEKQCRDENGFKCHTMSESH
LRQMRVYAENPTQVMEKFSSEFEENYLETLSRLHGTKRVPANQVYQELIC
NKTHIHMNATKWDALTTFIKYLGKKGLCLVDETEKGWFVQWIDREYLKRR
EEIEKARKEEVEEEVRLQRLMAARAAAAAAATGGERKAEEEEEGKRELRR
GEEEGRIVIGAGRLGGGGEGGGRGGGGIKRPRPVAATGNVFGGQEEEEEG
WRMSMKKKMVVGGNGVGEGGGGKKSELEKLMEQDTARKAAEAAARKKREE
VEEEMGDGGMEEGRTENWLMEGIVVKIVNKKIGGGKYYKQKGRVEKLLEG
GFVGEICLTGEEGGREGGRGGGGVRLRIDQEELETVIPAVGGRVLILNGK
GKGREGEMVGLDVENYACAVRVRGEREMVLKGVQYEDVCKVDRDWLRGGG
GR*
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Synonyms
Publications