NO29G00950, NO29G00950 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO29G00950 vs. NCBI_GenBank
Match: EWM21311.1 (protein of unknown function DUF399 [Nannochloropsis gaditana]) HSP 1 Score: 276.6 bits (706), Expect = 1.600e-70 Identity = 173/351 (49.29%), Postives = 204/351 (58.12%), Query Frame = 0
Query: 151 PSTPA-------PPSSSNFIMTRRNLLQTLRSASL-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLWQVLMSDPPQLQPYTTEGEKAVLQKLARSCNAIFLGEHYLTAKEGGKEGGEEKDQILAARIVEELQKYKPKDAKLTLGLEMVQQKFQPALDAYIASPPSSPSSPLTMTAEDEALKVATEWDARNPSSLPSSSSFASYIPLLHFAREKKIKLLALGLESEAISKVREVGLEGLSEEERGRYVLDPGGFISSVKGKEFKLYAERFIIPGFVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPAKFLAARILWDESMASAAVRHLQQNPK 494
PS P+ PP S TRR LQ+LRSASL +LWQVLMSDPPQLQPYT+EGEKAVL+ +AR+CNA+FLGEH ++GG G ++DQ LA R+VE L KYKP+DA L LGLE VQQKFQPALDAY+A + + A D L+ TEWD R +S F + +PLLH AR + IKLL LGLESEA++KVR+VGLEGL EEERGRYV DP GFI SVK FKLYAERFI+P F AR LS AKFLAARILWDESM++AA+RHL+ +PK
Sbjct: 140 PSAPSGVSSHAQPPPS-----TRRRFLQSLRSASLSLVAFLSPAFLASSRPALALRAPSKLAPPPPPSVRPFLWQVLMSDPPQLQPYTSEGEKAVLRDMARTCNAVFLGEH---VEKGGGGQGADEDQTLALRVVEALGKYKPRDASLVLGLEAVQQKFQPALDAYVADTGTD------LAAADARLRQETEWDER------ASVPFEACLPLLHRARGEGIKLLGLGLESEALAKVRQVGLEGLGEEERGRYVADPSGFIQSVKAPAFKLYAERFIMPSFAAR--------------AATAVTGEAQGGKGPSPGMTPAPLSAAKFLAARILWDESMSTAAIRHLKTHPK 456
BLAST of NO29G00950 vs. NCBI_GenBank
Match: CEM32425.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 139.8 bits (351), Expect = 2.300e-29 Identity = 99/279 (35.48%), Postives = 139/279 (49.82%), Query Frame = 0
Query: 216 WQVLMSDPPQLQPYTT-EGEKAVLQKLARSCNAIFLGEHYLTAKEGGKEGGEEKDQILAARIVEELQKYKPKDAKLTLGLEMVQQKFQPALDAYIASPPSSPSSPLTMTAEDEALKVATEWDARNPSSLPSSSSFASYIPLLHFAREKKIKLLALGLESEAISKVREVGLEGLSEEERGRYVLDPGGFISSVKGKEFKLYAERFIIPGFVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPAKFLAARILWDESMASAAVRHLQQNPK 494
+Q+L +DPP +QP T+ GE +L+K+ R + LGEH+ + DQ LA R+V EL + L LGLEMVQ +FQPALD YI+ + + A DE L+ +TEWD R P F +Y+PL H+AR+ ++ L+A +SEA KV+ G EGL ER RYV D GF++ FK+YA+R I F P F AAR+LWDE+MA+AA + L+++P+
Sbjct: 89 YQILPTDPPTMQPMTSGRGETNMLKKILRENELVLLGEHH----------DQGIDQELALRLVREL---RGLHYNLALGLEMVQLQFQPALDRYISREVAD------LAAADEDLRRSTEWDDRWP------FPFENYLPLFHWARQARVPLVAANTDSEAQLKVQLSGFEGLRGAERQRYVPDVLGFLNYTNQPGFKMYADRVIRRSFEYHNETGVLGPSP----------------------------DPNLFFAARVLWDETMANAATKWLEEHPR 314
BLAST of NO29G00950 vs. NCBI_GenBank
Match: XP_005832628.1 (hypothetical protein GUITHDRAFT_152654 [Guillardia theta CCMP2712] >EKX45648.1 hypothetical protein GUITHDRAFT_152654 [Guillardia theta CCMP2712]) HSP 1 Score: 112.5 bits (280), Expect = 3.900e-21 Identity = 91/274 (33.21%), Postives = 126/274 (45.99%), Query Frame = 0
Query: 229 YTTEGEKAV-------LQKLARSCNAIFLGEHYLTAKEGGKEGGEEKDQILAARIVEELQKYKPKDAKLTLGLEMVQQKFQPALDAYIASPPSSPSSPLTMTAEDEALKVATEWDARNPSSLPSSSSFASYIPLLHFAREKKIKLLALGLESEAISKVREVGLEGLSEEERGRYVLDPGGFISSVKGKEFKLYAERFIIPGFVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPAKFLAARILWDESMASAAVRHLQQNPKVR 496
+T GE+ V L+ L+R NA+F GE + KD+ LA RI++EL + + ++ +GLEMVQQ FQ LD Y+ S S S D L TEW+ R +F +Y+P+L + + KI LLAL +E+E SKV++ GL LS EER R ++DP GF+ K F Y + P F A F+A RILWDE+MASAA + L +NP V+
Sbjct: 163 FTFRGEQMVKTNSEGALRYLSRR-NAVFFGESH----------DSFKDKKLATRILKELHE---RRGRVVVGLEMVQQPFQQVLDWYVFSAVPSKGS-------DSLLFEKTEWNDR------WGWNFKAYLPVLQYCQLHKIPLLALNVEAETTSKVQQQGLVSLSSEERRRLIIDPNGFVQESLSKTFPSYVRSVLKPSFDAHVNMGIYNNDAKTF---------------------------QNFVANRILWDETMASAAAKFLLKNPDVQ 382
BLAST of NO29G00950 vs. NCBI_GenBank
Match: CBJ27968.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 101.3 bits (251), Expect = 9.000e-18 Identity = 62/209 (29.67%), Postives = 110/209 (52.63%), Query Frame = 0
Query: 216 WQVLMSDPPQLQPYTTEGEKAVLQKLARSCNAIFLGEHYLTAKEGGKEGGEEKDQILAARIVEELQKYKPKDAKLTLGLEMVQQKFQPALDAYIA-SPPSSPSSPLTMTAEDEALKVATEWDARNPSSLPSSSSFASYIPLLHFAREKKIKLLALGLESEAISKVREVGLEGLSEEERGRYVLDPGGFISSVKGKEFKLYAERFIIPGF 424
+++ +DPP P+ + E +++++A +F G H G + D LAA ++ +L A +GLE V+ +FQPALD+Y+A + + D L AT+W R + F +++PL H AR + + ++ALG++SE + V + G++ L E++R YV D GF++ V+ K F++YA++ I P +
Sbjct: 221 YRIEYTDPPTTVPFPRDTEPNLVKEIAGQ-GLVFFGVH----------GEDAPDPALAADVIGKLSASLKNQA--AIGLEQVEMQFQPALDSYVAGGDQGGDGKDEDLDSADAELARATQWAER------CAFPFENFLPLFHLARRRGLPMVALGVDSEKVFDVMQNGMDSLGEDDRNAYVSDFKGFVTYVRDKGFQVYADKLIFPSY 410
BLAST of NO29G00950 vs. NCBI_GenBank
Match: KOO23087.1 (iron-regulated protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 95.9 bits (237), Expect = 3.800e-16 Identity = 77/279 (27.60%), Postives = 114/279 (40.86%), Query Frame = 0
Query: 215 LWQVLMSDPPQLQPYTTEGEKAVLQKLARSCNAIFLGEHYLTAKEGGKEGGEEKDQILAARIVEELQKYKPKDAKLTLGLEMVQQKFQPALDAYIASPPSSPSSPLTMTAEDEALKVATEWDARNPSSLPSSSSFASYIPLLHFAREKKIKLLALGLESEAISKVREVGLEGLSEEERGRYVLDPGGFISSVKGKEFKLYAERFIIPGFVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPAKFLAARILWDESMASAAVRHLQQNPK 494
++ V+ L P + K + C A+FLGEH+ +A D +L + ++ EL K + + +GLE VQ++FQPALD+++A + L+ ATEW R FA+Y P+ RE I LLAL ++SE +S+V GL L E YV DP GF + FK Y + P + +S F + R+LWDESM SA+ + NP+
Sbjct: 67 IYSVVPDSTKTLSPTVKPLTAGTIVKQLQQCRAVFLGEHHNSA----------ADHLLQSAVIRELHKER-GSLPMAVGLEAVQRRFQPALDSFVAG-----------RIGEVELEEATEWRKR------WFWPFAAYAPVFRACRELGIPLLALNVDSEDLSRVEVGGLPALPPETLRSYVTDPEGFSAFAATTAFKEYVAYIVKPSY-------------------QMHQRMGILRTTITGQMLDEDMSFRNFFSGRVLWDESMGSASAAWCRNNPE 298
BLAST of NO29G00950 vs. NCBI_GenBank
Match: XP_009039927.1 (hypothetical protein AURANDRAFT_72253 [Aureococcus anophagefferens] >EGB05276.1 hypothetical protein AURANDRAFT_72253 [Aureococcus anophagefferens]) HSP 1 Score: 95.5 bits (236), Expect = 5.000e-16 Identity = 82/258 (31.78%), Postives = 107/258 (41.47%), Query Frame = 0
Query: 235 KAVLQKLARSCNAIFLGEHYLTAKEGGKEGGEEKDQILAARIVEELQKYKPKDAKLTLGLEMVQQKFQPALDAYIASPPSSPSSPLTMTAEDEALKVATEWDARNPSSLPSSSSFASYIPLLHFAREKKIKLLALGLESEAISKVREVGLEGLSEEERGRYVLDPGGFISSVKGKEFKLYAERFIIPGFVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPAKFLAARILWDESMASAAVRHLQQNP 493
+ ++ +LAR A+FLGEH+ D L A++V L+ +P L +G E VQQ+FQPALDAY A S + L ATEW+ R S F +Y P+ A+ K LLAL ++ E +KV GL GL RGRY+ DP GF + K FK Y I P + S FLA R+LWDE+MAS L P
Sbjct: 1124 RTLVAQLARR-RAVFLGEHH----------DAVADHALQAQLVAALRAAEP-SRPLAVGFEAVQQRFQPALDAYGAGKLS-----------ERRLAAATEWEQR------WSWPFEAYAPVFRAAKAAKADLLALNVDGEDAAKVSAAGLAGLDRAARGRYLPDPQGFAAFAKTVAFKSYVGYAIRPSYALH---------------VELGILPATTTSECVGNDASCTTSFKNFLANRVLWDEAMASVMETWLASKP 1337
BLAST of NO29G00950 vs. NCBI_GenBank
Match: CEL99640.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 88.6 bits (218), Expect = 6.100e-14 Identity = 76/280 (27.14%), Postives = 121/280 (43.21%), Query Frame = 0
Query: 216 WQVLMSDPPQLQPYTTEGEKAVLQKLA-RSCNAIFL-GEHYLTAKEGGKEGGEEKDQILAARIVEELQK-YKPKDAKLTLGLEMVQQKFQPALDAYIASPPSSPSSPLTMTAEDEALKVATEWDARNPSSLPSSSSFASYIPLLHFAREKKIKLLALGLESEAISKVREVGLEGLSEEERGRYVLDPGGFISSVKGKEFKLYAERFIIPGFVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPAKFLAARILWDESMASAAVRHLQQNP 493
W+ S P + P + + L++ + R N I L GEH+ ++ L A++ EE QK K + +GLE VQ FQP LD Y++ + D L TEW R + F +Y+P+ A+++ + L+AL +E S V GLEGL ++ R +++ DP GF + FK+Y + ++P + +PA F AARI+ DE+MA+ AV+H++ NP
Sbjct: 126 WEQPSSLPVIVTPLSQDERTDALRRWSVRDGNTIVLMGEHHNAPED------HRLQAALIAQMEEERQKGSNGKLPPIAIGLEQVQVDFQPILDGYLSGKYT-----------DVDLYTKTEWATR------WAWPFDAYLPIFQLAKKRGLHLIALNPSTEDTSAVVSSGLEGLGQQARDKFIPDPLGFRDQTRRPGFKMYVDEVVLPSY----------------------------GYHANAGLLGDNPTPANFFAARIVRDEAMAAGAVQHVRDNP 354
BLAST of NO29G00950 vs. NCBI_GenBank
Match: GAX27862.1 (hypothetical protein FisN_13Hh027 [Fistulifera solaris]) HSP 1 Score: 83.6 bits (205), Expect = 1.900e-12 Identity = 69/248 (27.82%), Postives = 106/248 (42.74%), Query Frame = 0
Query: 244 SCNAIFLGEHYLTAKEGGKEGGEEKDQILAARIVEELQKYKPKDAKLTLGLEMVQQKFQPALDAYIASPPSSPSSPLTMTAEDEALKVATEWDARNPSSLPSSSSFASYIPLLHFAREKKIKLLALGLESEAISKVREVGLEGLSEEERGRYVLDPGGFISSVKGKEFKLYAERFIIPGFVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPAKFLAARILWDESMASAAVRHLQQN 492
S A++LGEH+ A +D L A +VE L ++ + L +GLE VQ +FQP LD ++A S E L+ EW+ R + SF +Y P+ A+++ I L+AL + SE ++ V + GL GL ++ Y++D F S +G ++ Y + I P F +S F + RILWD+SMAS A + N
Sbjct: 87 SSGALWLGEHHNAA----------RDHNLQALLVESL--HQNRKGPLAIGLEQVQIQFQPILDDFVAGNLSL-----------EQLRQGVEWNTR------WNWSFDTYAPVFRLAQQRGIPLVALNVNSEDLALVEKEGLPGLPKDRLKEYIIDRPAFASFARGLQYSTYVDYVIRPSF-------------------ELHQSMGLLKHTMSGEKLDQEMSFRNFFSGRILWDQSMASRAYMWTRAN 286
BLAST of NO29G00950 vs. NCBI_GenBank
Match: GAX12575.1 (hypothetical protein FisN_13Lh027 [Fistulifera solaris]) HSP 1 Score: 83.2 bits (204), Expect = 2.500e-12 Identity = 69/248 (27.82%), Postives = 106/248 (42.74%), Query Frame = 0
Query: 244 SCNAIFLGEHYLTAKEGGKEGGEEKDQILAARIVEELQKYKPKDAKLTLGLEMVQQKFQPALDAYIASPPSSPSSPLTMTAEDEALKVATEWDARNPSSLPSSSSFASYIPLLHFAREKKIKLLALGLESEAISKVREVGLEGLSEEERGRYVLDPGGFISSVKGKEFKLYAERFIIPGFVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPAKFLAARILWDESMASAAVRHLQQN 492
S A++LGEH+ A +D L A +VE L ++ + L +GLE VQ +FQP LD ++A S E L+ EW+ R + SF +Y P+ A+++ I L+AL + SE ++ V + GL GL ++ Y++D F S +G ++ Y + I P F +S F + RILWD+SMAS A + N
Sbjct: 90 SSGALWLGEHHNAA----------RDHNLQALLVESL--HQNRKGPLAIGLEQVQIQFQPILDEFVAGNLSL-----------EQLRQGVEWNTR------WNWSFDTYAPVFRLAQQRGIPLVALNVNSEDLALVEKDGLPGLPKDRLKEYIIDRPAFASFARGLQYATYVDYVIRPSF-------------------ELHQSMGLLKHTMSGEKLDQEMSFRNFFSGRILWDQSMASRAYMWTRAN 289
BLAST of NO29G00950 vs. NCBI_GenBank
Match: XP_002293361.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89097.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 81.3 bits (199), Expect = 9.700e-12 Identity = 68/252 (26.98%), Postives = 101/252 (40.08%), Query Frame = 0
Query: 247 AIFLGEHYLTAKEGGKEGGEEKDQILAARIVEELQKYKPKDA-------KLTLGLEMVQQKFQPALDAYIASPPSSPSSPLTMTAEDEALKVATEWDARNPSSLPSSSSFASYIPLLHFAREKKIKLLALGLESEAISKVREVGLEGLSEEERGRYVLDPGGFISSVKGKEFKLYAERFIIPGFVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPAKFLAARILWDESMASAAVRHLQQN 492
A++LGEH+ D L A V + + + K+ +GLEMVQ +FQPALDAYIA SS + ++ +WD R S SF Y+P+ R+ + L+AL ++SE + V G L E+ +Y+ D GF + + FK Y + I P + + +F + RILWDESMAS A + + N
Sbjct: 174 AVWLGEHH----------NSVNDHNLQADFVRAIYNQRGESGGNSSSNNKMAVGLEMVQLQFQPALDAYIAKKISS-----------DEMRRQVQWDKR------WSWSFEGYLPVFETCRKLGVTLIALNVDSEDLGLVESGGFPALPREKMQKYISDTTGFAEFARNRYFKTYVDYVISPSY-------------------DLHKQMGILRTTITGQQLEDDMPFTRFFSGRILWDESMASNAFKWTEAN 379 The following BLAST results are available for this feature:
BLAST of NO29G00950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G00950 ID=NO29G00950|Name=NO29G00950|organism=Nannochloropsis oceanica|type=gene|length=2597bpback to top protein sequence of NO29G00950.1 >NO29G00950.1-protein ID=NO29G00950.1-protein|Name=NO29G00950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=609bpback to top protein sequence of NO29G00950.2 >NO29G00950.2-protein ID=NO29G00950.2-protein|Name=NO29G00950.2|organism=Nannochloropsis oceanica|type=polypeptide|length=502bpback to top Synonyms
Publications
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