NO29G00930, NO29G00930 (gene) Nannochloropsis oceanica

Overview
NameNO29G00930
Unique NameNO29G00930
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1725
Alignment locationchr29:324007..325731 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:324007..325731 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR003892CUE
Homology
The following BLAST results are available for this feature:
BLAST of NO29G00930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL061nonsL061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G00930.1NO29G00930.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G00930.1NO29G00930.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G00930 ID=NO29G00930|Name=NO29G00930|organism=Nannochloropsis oceanica|type=gene|length=1725bp
ATGAGCACCCCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAACAACAACAACCTCCGGCGGCGAGCATTTCCTTTGACGATGCCA
TTCAGACGTTACAAAGCATGTTCCCTGAGAGAGGGTTGAGTGCCGCGGCC
TTGGgtaaggacagggcgaggaggttcttgtgggggcgaagggacaatag
agcgtgattgatcccttagaacacatttttaaaaatgtgagctgcgcttg
ggttataagcggagagcgcatggtgcgaacatggaaaccccgccctcctc
tgacattctcacaccccatgccgccctactccctgacccctatctatcca
tcaacacaaaaacagGCCAGCTCCTGTCTGACAATCAATGGAACATGGAG
CGGACAATCGAGGTCCTCCTCAACACGCCATCTCCACCTCCCTCAGTCGG
CCCCTCCCCCTCCCCTTTACTTGGTCAACAGCAGCAGCCGCAGCCGCCGC
CGTCGGGGGGAGAATCAGACGAAGCCATGGCTCGCCGCCTCAGCATGGAA
ATGAATGGCCCTCCCCCCTCTTCCTCCTCCTCTCCCTCCCCCTCCATCTT
TTCGTCGGCCGCCTCCGCCTCTTCAACCCGCAATTACCCCTCCCATGATT
TCCTTCCTCCCTCCAATCTTCCCCGTGGCCGCCCCACCACTTTGCCTGAC
GACTTTCTCCGCGTCCCAGGTCACAATGCCCGTCGCGCGACCACCCCTTC
CTCCCTTCCCCGCTCTCCTCACCAGCAGCTTTTGATGGATGAGCAACTAG
CGCGAATGCTCCAGCAGGAAGACGATGTGATTGCCCAGCAGCAGCAGCAG
CAGCAGCGGCAGCAGCGGCAGCAGCGGCAGGAAGGAGGACATCTCTACCG
TCCTTCATCAGCTGGATACCCGGCTCCCACGGCCGCACAAAGACGACGCC
CTTCTGCCTCCTCTCCTTCGCCATCTTTCTTGCCAGCGGGGGCCGAGGAA
GGCTTTGCAAATCTGAAGAAGGGAATGGAGGAAGTAGGAGACACCATGAA
GAAGAGAGTGAAGGATCTCTATGCCCGTTTTTTAAAAAGTAAAGACAGAG
GGAGGGATGGAAGGAGGGGTCATGTGCCTCTGGCGGAGATGGGGGGGGTG
GAAGAGGGGGTGGAGGATGACGAGGTAGTGCTGTTCCATCCATACGAGCA
GCAGCAGCAGCAGCAGCAGCACAGGCGGATGCCATTGGGAGTGACACAGC
AACAATGTGGAGGAGGAGGAGGAGGACATAGTGCAGGGGGCGGAGGAGGA
GTGCCAGTGGTGGGGGGGCAGGAGCAGCGGCAGCAGCAACCGCAGCAGGG
CACAGGCGGAGGAGTGGGGCTGGTCAGGGGGGGGAATGGGGACGAGGTGG
TTTTCTCTTCCTCATCCCTGGAAGAGTCGAGGAGGATGGTGTGAGGATGA
AGGGAGGGATGGAGGGAGGGAGTTAGGACTGGCCCGATGTGGGACAATAG
GGGGGTTTGCGCGGATGTATAGGAAAGAACAGAAGATAATAATGTGATGG
AAAAGGAGAAAAAGGGAAAGAAGATGAAATAGCAGAAGAAGAGTTGCTCT
TACAAATAGGAAAGTAGAAGATCGATGAAGAAAGGCACTGCCGCAGCCGC
CGTAGTAGCATCAGCAGCTCTAGCAACAATAGCAGCAGTAGCGATTACAA
CAGCAGGAAAGTCAAAGACTTGTCG
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protein sequence of NO29G00930.1

>NO29G00930.1-protein ID=NO29G00930.1-protein|Name=NO29G00930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=411bp
MSTPQQQQQQQQQQQQQQQQQQPPAASISFDDAIQTLQSMFPERGLSAAA
LGQLLSDNQWNMERTIEVLLNTPSPPPSVGPSPSPLLGQQQQPQPPPSGG
ESDEAMARRLSMEMNGPPPSSSSSPSPSIFSSAASASSTRNYPSHDFLPP
SNLPRGRPTTLPDDFLRVPGHNARRATTPSSLPRSPHQQLLMDEQLARML
QQEDDVIAQQQQQQQRQQRQQRQEGGHLYRPSSAGYPAPTAAQRRRPSAS
SPSPSFLPAGAEEGFANLKKGMEEVGDTMKKRVKDLYARFLKSKDRGRDG
RRGHVPLAEMGGVEEGVEDDEVVLFHPYEQQQQQQQHRRMPLGVTQQQCG
GGGGGHSAGGGGGVPVVGGQEQRQQQPQQGTGGGVGLVRGGNGDEVVFSS
SSLEESRRMV*
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Synonyms
Publications