NO29G00920, NO29G00920 (gene) Nannochloropsis oceanica

Overview
NameNO29G00920
Unique NameNO29G00920
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2049
Alignment locationchr29:321782..323830 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:321782..323830 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO29G00920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL061nonsL061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G00920.1NO29G00920.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G00920.1NO29G00920.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G00920 ID=NO29G00920|Name=NO29G00920|organism=Nannochloropsis oceanica|type=gene|length=2049bp
ATGATGATGCCGCCATACCATGTGCTCTTCGCCACGATTGAGGCGGAAGG
GGCATGGGTCAAGCCAGCCAACTCACATAAAGGCAACAGTTCCCATACAG
TGGCACAGAAGCAGTCCACACCCCCTGAGTGTGAAGGAGTCTTTAAGGAG
CCAGAGGCCGAGTATTTCGGTGgtgaaaaggaatgtgtacgaatgagctg
cccagtacctttcctcgggcgagcacctgacggcccatctcgacaggccc
ttctgaccgaaatccatttggtgcactttgtcttaaatttatccatcata
tactgccgaccagcttggtccagctattttcgatttatttatataagtgc
gagatcgcccccgcgtggtccgtctctcccttgctgtcaggtcttctcca
tggtcatttatgtgaatatacggcgctaaaatgaccagGACGAGGAGGAG
GAGCAGTAGCAGTAGGTGTAGGGGTAGGAATAGCAGCAGCAGAAGCAGCA
GTAGCAGCAGGAAGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGTTACGTGCCGGCCATCCGAGGACTTTGTGGGTGTG
AGAACTGTGAACAGTTCGTATCTCGGGACGGCCAAGGGGCACGTAACATT
CTGCAGGTGTACAGGACTACGCGATCTCCGATACAGTCAACCGCGGCAGG
TGATGCGGACACTGTATGTGTTGCCTCCCCGCTGACCTCCTTCCCACCCC
CCCTCCTCCTGGCCCTGTTTGGCCGTTCGAGATTTTTTTACGGGTAAAAA
AGTTGTCAAAGTCCCTTAATGAGTATAGGCAACATTTTATTGTCGGAGGA
CTTGCCCTCGTATGTAATCCTGTGACGTAAGGTTGCATTCGATACTTCTA
GGTTTGTAGGATAGCTACGTCAGAAAAGATCTAAATGACTAATACGCCGC
CATCAGCCAAAAGGACAAACAGATGAAGATCAAGGAATTGAATGAGGGTT
TACTCAACATTTTTACTCTATGACTCTCTTGTGATCAGCAGGAAATGCGA
GAGCTTTCGAAGGCGATTTGCCCGAACCAAGCTACTCCCACCAAACAAAA
ATAAGATTTTCCCATTGGCTGTAGTTGTACCCATAGTTGTAGGTCGCAGA
TGTCGCCGTCAAAATGATCAAAAATAAGTGAGCTGGAGCAAAATCAAAAA
GACTGGCGGAGGCTGGGGGGTTCAAAACAACATATCGACCCAGAGATAGC
GGCGGCTAAATAAGGCGGGCCTCGAGCGCACCACTTCCGGAGACGTATCT
TTTTGGCCACATTCTATCAAAAGTTTCTATCCGATTTCTACACATATTCT
GTGGACGCGAAACGTTACCATGCCTTCAAGAAGGCCGCTCTCAAAGATGC
GAACTGTTAGCCACACACACCATGCACTGTACCGTACAAGAGGTTCGCTT
TAAATTCATCAGGTAGCATATCATGGAGAGTCTCTACAAATTGAAATTTG
TTTGCGTGTCATGTATTCCAAGCAAATAGCCTCGGCGTAAATAATATCAA
GGCCGGGCCTTGCAGCCTCTCACACCGAACTAGCTTGAAACTTGTTGGGA
GGTAAGGGAATAGCCAAAACAACGAATGACTTTCTATCGAACGGAGCATG
AACTGAAAAGGAAAATGAGTTTTACAAAGCCCTCATCTAATACGTCACAA
TCATGAACATCAACACGTTCAATGGAGGGTTTCAGTGTCTGCAATGCGCC
TTCCACAGTTCCCCGCGGCCGACTGTCATGGCCCTACAAACCATTTCCTG
CTCATTGCTCCTCCCACTGTAAAAGTGTAGCCAGAAGTGCTGCGAGGGCA
TTGACTTATGGGTGCGAAATGGGACTACACATCTATGATATTGAAAGTGT
TACTGGGCAATGAATGTCAACCTCCTGGCAAAGGTGCAATTCGGTGTTCA
AGTGTGACGAAGACCGAATGATGATGCGTGAATCCCCAAGAAGCAATGCA
AGTGCTGCGGCCAGGTTCATCTCACGCCCGCCATACGAACTTGTACACA
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protein sequence of NO29G00920.1

>NO29G00920.1-protein ID=NO29G00920.1-protein|Name=NO29G00920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=177bp
MMMPPYHVLFATIEAEGAWVKPANSHKGNSSHTVAQKQSTPPECEGVFKE
PEAEYFGGRGGGAVAVGVGVGIAAAEAAVAAGRGGRGGGGGGGGGGGGGG
YVPAIRGLCGCENCEQFVSRDGQGARNILQVYRTTRSPIQSTAAGDADTV
CVASPLTSFPPPLLLALFGRSRFFYG*
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Synonyms
Publications