NO29G00900, NO29G00900 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO29G00900 vs. NCBI_GenBank
Match: XP_008618505.1 (hypothetical protein SDRG_14173 [Saprolegnia diclina VS20] >EQC28080.1 hypothetical protein SDRG_14173 [Saprolegnia diclina VS20]) HSP 1 Score: 173.3 bits (438), Expect = 3.200e-39 Identity = 97/274 (35.40%), Postives = 133/274 (48.54%), Query Frame = 0
Query: 87 PSNGQNAPPEPMI--EYEIKDGLRHVKPYVYSFYARAKGRWWGRSISEVFQKEFRTYNPQYYASSIQAGTITVNGEKVLPSYLLKNNDLILHKCHRHEPPVLGEKVHAVFENDELLVVDKPPTIPIHPCGAYRHNSLLSILAEERRHAGQGLGRDGGERGMGEDSMPAVAQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFLIYRLDRLTSGLLILAKSSHKANELSQELRGGQTKKYYLALVEGD 359
P+ Q EP + EYEI+DG R+VKPYV+ F A AK RW+ R++ +VF EF ++P YY +I++G IT+NG + P +LKN DLI H HRHEPPV+G+ + V+E +L+VV KP T+P HPCGAYRHNSL I+ R L +++RLDRLTSG+++LAK++ KA ELS+ + K YLA V G+
Sbjct: 4 PAKRQKVEAEPAVVAEYEIRDGYRYVKPYVFKFMAHAKQRWFNRTLMDVFTTEFGAFSPDYYVMAIESGRITLNGARTTPETVLKNGDLICHMTHRHEPPVVGDDIPVVYETPDLVVVSKPSTVPTHPCGAYRHNSLHFIVLASR-----------------------------------------------------------------------------PDLTALHIVHRLDRLTSGVVVLAKTTAKARELSKCIADRTASKAYLARVRGE 200
BLAST of NO29G00900 vs. NCBI_GenBank
Match: XP_012205058.1 (hypothetical protein SPRG_09924 [Saprolegnia parasitica CBS 223.65] >KDO24287.1 hypothetical protein SPRG_09924 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 171.0 bits (432), Expect = 1.600e-38 Identity = 95/265 (35.85%), Postives = 129/265 (48.68%), Query Frame = 0
Query: 93 APPEPMIEYEIKDGLRHVKPYVYSFYARAKGRWWGRSISEVFQKEFRTYNPQYYASSIQAGTITVNGEKVLPSYLLKNNDLILHKCHRHEPPVLGEKVHAVFENDELLVVDKPPTIPIHPCGAYRHNSLLSILAEERRHAGQGLGRDGGERGMGEDSMPAVAQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFLIYRLDRLTSGLLILAKSSHKANELSQELRGGQTKKYYLALVEG 358
A P + EYEI+DG R+VKPYV+ F A AK RW+ R++ +VF EF ++P YY +I++G IT+NG + P +LKN DL+ H HRHEPPV+G+ + V+E +L+VV KP T+P HPCGAYRHNSL I+ R L +++RLDRLTSG++ILAK++ KA ELS+ + K YLA V G
Sbjct: 11 AEPPVVAEYEIRDGYRYVKPYVFKFMAHAKQRWFNRTLMDVFTTEFGAFSPSYYVMAIESGRITLNGARTTPETVLKNGDLLCHMTHRHEPPVVGDDIPVVYETPDLVVVSKPSTVPTHPCGAYRHNSLHFIVLASR-----------------------------------------------------------------------------PDLTALHIVHRLDRLTSGVVILAKTTAKARELSKCIADRTASKAYLARVRG 198
BLAST of NO29G00900 vs. NCBI_GenBank
Match: OQR82383.1 (RNA pseudouridylate synthase [Achlya hypogyna]) HSP 1 Score: 166.8 bits (421), Expect = 3.000e-37 Identity = 95/265 (35.85%), Postives = 124/265 (46.79%), Query Frame = 0
Query: 93 APPEPMIEYEIKDGLRHVKPYVYSFYARAKGRWWGRSISEVFQKEFRTYNPQYYASSIQAGTITVNGEKVLPSYLLKNNDLILHKCHRHEPPVLGEKVHAVFENDELLVVDKPPTIPIHPCGAYRHNSLLSILAEERRHAGQGLGRDGGERGMGEDSMPAVAQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFLIYRLDRLTSGLLILAKSSHKANELSQELRGGQTKKYYLALVEG 358
A EP EY+++DG R+VKPYVY F AK RW+ R++ ++F EF ++P YY +IQ+G IT+NG P +KN DLI H HRHEPPV+GE + V E D+L+VV KP ++P HPCGAYR NSL I+ R L +++RLDRLTSG++ILAK+ KA ELSQ + K YLA V G
Sbjct: 17 AEAEPTPEYDVRDGYRYVKPYVYKFKTHAKQRWFDRTLMDIFTSEFGAFSPDYYTMAIQSGRITLNGALTTPEARIKNGDLICHMTHRHEPPVIGEDISVVHETDDLVVVSKPSSVPTHPCGAYRFNSLHYIVLAAR-----------------------------------------------------------------------------PDLKHLHIVHRLDRLTSGVVILAKTPAKARELSQCIADRTASKAYLARVRG 204
BLAST of NO29G00900 vs. NCBI_GenBank
Match: XP_014529652.1 (pseudouridylate synthase [Blastocystis sp. subtype 4] >KNB46209.1 pseudouridylate synthase [Blastocystis sp. subtype 4]) HSP 1 Score: 162.5 bits (410), Expect = 5.600e-36 Identity = 99/261 (37.93%), Postives = 125/261 (47.89%), Query Frame = 0
Query: 100 EYEIKDGLRHVKPYVYSFYARAKGRWWGRSISEVFQKEFRTYNPQYYASSIQAGTITVNGEKVLPSYLLKNNDLILHKCHRHEPPVLGEKVHAVFENDELLVVDKPPTIPIHPCGAYRHNSLLSILAEERRHAGQGLGRDGGERGMGEDSMPAVAQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFLIYRLDRLTSGLLILAKSSHKANELSQELRGGQTKKYYLALVEGDMR 361
EY IK+G+R+VKPY+Y K RW+GR+I +VF EF Y+ YY +I G I VN +KV YLLKN D+I H HRHEPPV + VH V E DEL+ V+KP +IP+H CGAYR+NSL IL E GG QN ++LI+RLDR+TSG+++LAK A LS+ LR G K YLA VEG +
Sbjct: 15 EYIIKNGMRYVKPYIYRHETNCKQRWFGRTILDVFSTEFGAYSADYYRDAIVTGRIVVNNKKVSTDYLLKNGDVICHTVHRHEPPVPYDPVHIVGETDELIAVNKPSSIPVHTCGAYRYNSLEMILKVE-----------GG------------FQN-------------------------------------------------------IYLIHRLDRVTSGIVLLAKQKETAARLSESLRQGGVHKVYLAEVEGQWK 197
BLAST of NO29G00900 vs. NCBI_GenBank
Match: XP_009827732.1 (hypothetical protein H257_04803 [Aphanomyces astaci] >ETV83061.1 hypothetical protein H257_04803 [Aphanomyces astaci]) HSP 1 Score: 161.4 bits (407), Expect = 1.200e-35 Identity = 92/258 (35.66%), Postives = 125/258 (48.45%), Query Frame = 0
Query: 100 EYEIKDGLRHVKPYVYSFYARAKGRWWGRSISEVFQKEFRTYNPQYYASSIQAGTITVNGEKVLPSYLLKNNDLILHKCHRHEPPVLGEKVHAVFENDELLVVDKPPTIPIHPCGAYRHNSLLSILAEERRHAGQGLGRDGGERGMGEDSMPAVAQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFLIYRLDRLTSGLLILAKSSHKANELSQELRGGQTKKYYLALVEG 358
EYE++DG R+VKPYV++F AK RW+GR++ E+F EF +++P+YYA +I G IT+NG+ P+ ++KN DL+ HK HRHEPPV G+ + E +LLVV KP +P HPCGAYR NSL IL R P + + L +++RLDRLTSG++ILAK+ KA LS + K YLA V G
Sbjct: 31 EYEVRDGYRYVKPYVFAFETHAKQRWFGRTLLEIFTTEFGSFSPEYYALAIDTGRITLNGKLTPPTTVVKNGDLLCHKTHRHEPPVSGDTIEIAHETPDLLVVSKPAGVPTHPCGAYRFNSLHFILLHMR---------------------PDIPK--------------------------------------------------------LHVVHRLDRLTSGVVILAKTPSKARALSASIADRTASKTYLARVRG 211
BLAST of NO29G00900 vs. NCBI_GenBank
Match: XP_009827733.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV83062.1 hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 161.4 bits (407), Expect = 1.200e-35 Identity = 92/258 (35.66%), Postives = 125/258 (48.45%), Query Frame = 0
Query: 100 EYEIKDGLRHVKPYVYSFYARAKGRWWGRSISEVFQKEFRTYNPQYYASSIQAGTITVNGEKVLPSYLLKNNDLILHKCHRHEPPVLGEKVHAVFENDELLVVDKPPTIPIHPCGAYRHNSLLSILAEERRHAGQGLGRDGGERGMGEDSMPAVAQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFLIYRLDRLTSGLLILAKSSHKANELSQELRGGQTKKYYLALVEG 358
EYE++DG R+VKPYV++F AK RW+GR++ E+F EF +++P+YYA +I G IT+NG+ P+ ++KN DL+ HK HRHEPPV G+ + E +LLVV KP +P HPCGAYR NSL IL R P + + L +++RLDRLTSG++ILAK+ KA LS + K YLA V G
Sbjct: 31 EYEVRDGYRYVKPYVFAFETHAKQRWFGRTLLEIFTTEFGSFSPEYYALAIDTGRITLNGKLTPPTTVVKNGDLLCHKTHRHEPPVSGDTIEIAHETPDLLVVSKPAGVPTHPCGAYRFNSLHFILLHMR---------------------PDIPK--------------------------------------------------------LHVVHRLDRLTSGVVILAKTPSKARALSASIADRTASKTYLARVRG 211
BLAST of NO29G00900 vs. NCBI_GenBank
Match: XP_008892179.1 (hypothetical protein PPTG_02697 [Phytophthora parasitica INRA-310] >ETI49603.1 hypothetical protein F443_06595 [Phytophthora parasitica P1569] >ETK89492.1 hypothetical protein L915_06468 [Phytophthora parasitica] >ETL42895.1 hypothetical protein L916_06413 [Phytophthora parasitica] >ETL96071.1 hypothetical protein L917_06278 [Phytophthora parasitica] >ETM49247.1 hypothetical protein L914_06388 [Phytophthora parasitica] >ETN22963.1 hypothetical protein PPTG_02697 [Phytophthora parasitica INRA-310] >ETO78319.1 hypothetical protein F444_06667 [Phytophthora parasitica P1976] >ETP19363.1 hypothetical protein F441_06605 [Phytophthora parasitica CJ01A1] >ETP47307.1 hypothetical protein F442_06639 [Phytophthora parasitica P10297]) HSP 1 Score: 160.2 bits (404), Expect = 2.800e-35 Identity = 94/258 (36.43%), Postives = 126/258 (48.84%), Query Frame = 0
Query: 100 EYEIKDGLRHVKPYVYSFYARAKGRWWGRSISEVFQKEFRTYNPQYYASSIQAGTITVNGEKVLPSYLLKNNDLILHKCHRHEPPVLGEKVHAVFENDELLVVDKPPTIPIHPCGAYRHNSLLSILAEERRHAGQGLGRDGGERGMGEDSMPAVAQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFLIYRLDRLTSGLLILAKSSHKANELSQELRGGQTKKYYLALVEG 358
+Y +G R V+PYVY F AK RW+GR + E+F KEF +P+YY +I +G I+VN + V ++KN DLI+H HRHEPPV GE V V+E+D+L+VV KPP++P HPCGAYRHNSL +IL R P + Q L +++RLDRLTSG+++LAK++ KA LS + Q K YLA V G
Sbjct: 72 KYSFANGYRMVEPYVYEFRTYAKARWFGRELLEIFTKEFGANSPEYYKFAIASGRISVNLKIVPADTIIKNGDLIIHTAHRHEPPVSGEDVSVVYEDDDLIVVSKPPSMPTHPCGAYRHNSLHTILQATR---------------------PDLPQ--------------------------------------------------------LNIVHRLDRLTSGVVLLAKNAAKAKALSSIIADRQASKTYLARVRG 252
BLAST of NO29G00900 vs. NCBI_GenBank
Match: OQR81911.1 (RNA pseudouridylate synthase [Thraustotheca clavata]) HSP 1 Score: 159.8 bits (403), Expect = 3.600e-35 Identity = 97/269 (36.06%), Postives = 126/269 (46.84%), Query Frame = 0
Query: 93 APPEPMIEYEIKDGLRHVKPYVYSFYARAKGRWWGRSISEVFQKEFRTYNPQYYASSIQAGTITVNGEKVLPSYLLKNNDLILHKCHRHEPPVLGEKVHAVFENDELLVVDKPPTIPIHPCGAYRHNSLLSILAEERRHAGQGLGRDGGERGMGEDSMPAVAQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFLIYRLDRLTSGLLILAKSSHKANELS---QELRGGQTKKYYLALVEGD 359
A E +YEI DG R+VKPYVY F AK RW+GR++ ++F EF ++P YY +IQ+G IT+NGE ++KN D I H HRHEPPV+ +++ V E EL+VV KP T+P HPCGAYRHNSL I+ R P + Q L +++RLDRLTSG++ILAK+S KA ELS L K YLA G+
Sbjct: 11 AENESPAQYEILDGYRYVKPYVYKFQTHAKQRWFGRTLLDIFLSEFGAFSPDYYKMAIQSGRITLNGEMTCIDTVVKNGDCITHMTHRHEPPVVCDEIPIVHETPELIVVSKPSTVPTHPCGAYRHNSLHYIVLHSR---------------------PDIKQ--------------------------------------------------------LHIVHRLDRLTSGVVILAKNSAKARELSLCIVVLADRSASKAYLARARGE 202
BLAST of NO29G00900 vs. NCBI_GenBank
Match: XP_009519009.1 (hypothetical protein PHYSODRAFT_310955 [Phytophthora sojae] >EGZ23721.1 hypothetical protein PHYSODRAFT_310955 [Phytophthora sojae]) HSP 1 Score: 159.5 bits (402), Expect = 4.700e-35 Identity = 94/265 (35.47%), Postives = 128/265 (48.30%), Query Frame = 0
Query: 100 EYEIKDGLRHVKPYVYSFYARAKGRWWGRSISEVFQKEFRTYNPQYYASSIQAGTITVNGEKVLPSYLLKNNDLILHKCHRHEPPVLGEKVHAVFENDELLVVDKPPTIPIHPCGAYRHNSLLSILAEERRHAGQGLGRDGGERGMGEDSMPAVAQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFLIYRLDRLTSGLLILAKSSHKANELSQELRGGQTKKYYLALVEGDMRGVSD 365
+Y +G R V+PYVY F AK RW+ R + E+F KEF +P+YY +I +G I+VN + V ++KN DLI+H HRHEPPV GE+V V+E+D+L+VV KPP++P HPCGAYRHNSL SI+ R P + Q L +++RLDRLTSG+++LAK++ KA LS + Q K YLA V G + D
Sbjct: 42 KYSFANGYRMVEPYVYEFRTFAKARWFDRQLLEIFTKEFGANSPEYYKFAIASGRISVNHKIVPADTVIKNGDLIIHTAHRHEPPVSGEEVSVVYEDDDLIVVSKPPSMPTHPCGAYRHNSLHSIVQATR---------------------PDLPQ--------------------------------------------------------LNIVHRLDRLTSGVVLLAKNAAKAKALSAIIANRQASKMYLARVRGQFPDLLD 229
BLAST of NO29G00900 vs. NCBI_GenBank
Match: POM57976.1 (RNA pseudouridylate synthase [Phytophthora palmivora var. palmivora]) HSP 1 Score: 159.1 bits (401), Expect = 6.200e-35 Identity = 94/267 (35.21%), Postives = 129/267 (48.31%), Query Frame = 0
Query: 100 EYEIKDGLRHVKPYVYSFYARAKGRWWGRSISEVFQKEFRTYNPQYYASSIQAGTITVNGEKVLPSYLLKNNDLILHKCHRHEPPVLGEKVHAVFENDELLVVDKPPTIPIHPCGAYRHNSLLSILAEERRHAGQGLGRDGGERGMGEDSMPAVAQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFLIYRLDRLTSGLLILAKSSHKANELSQELRGGQTKKYYLALVEGDMRGVSDRE 367
+Y +G R V+PYVY F AK RW+ R + E+F KEF +P+YY +I +G I+VN + V ++KN DLI+H HRHEPPV GE+V V+E+D+L+VV KPP++P HPCGAYRHNSL +I+ R P + Q L +++RLDRLTSG+++LAK++ KA LS + Q K YLA V G V D +
Sbjct: 64 KYSFANGYRMVEPYVYEFRTFAKARWFDRELLEIFTKEFGANSPEYYEFAIASGRISVNHKIVPADTIIKNGDLIIHTAHRHEPPVSGEEVPVVYEDDDLIVVSKPPSMPTHPCGAYRHNSLHTIVQATR---------------------PDLPQ--------------------------------------------------------LNIVHRLDRLTSGVVLLAKNATKAKALSSIIADRQASKTYLARVRGQFPEVLDSD 253 The following BLAST results are available for this feature:
BLAST of NO29G00900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G00900 ID=NO29G00900|Name=NO29G00900|organism=Nannochloropsis oceanica|type=gene|length=3354bpback to top protein sequence of NO29G00900.1 >NO29G00900.1-protein ID=NO29G00900.1-protein|Name=NO29G00900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=851bpback to top Synonyms
Publications
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