NO29G00880, NO29G00880 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO29G00880
Unique Name	NO29G00880
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1815
Alignment location	chr29:312871..314685 +

Link to JBrowse

Properties


Property Name	Value
Description	Beta--galactosyltransferase 3

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr29	genome	chr29:312871..314685 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016757	transferase activity, transferring glycosyl groups
GO:0016757	transferase activity, transferring glycosyl groups
GO:0016740	transferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process
GO:0005975	carbohydrate metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR029044	Nucleotide-diphossugar_trans
IPR027995	Galactosyl_T_N
IPR027791	Galactosyl_T_C
IPR003859	Galactosyl_T

Homology

[Close]

BLAST of NO29G00880 vs. NCBI_GenBank
Match: EWM21309.1 (beta- -galactosyltransferase 3 [Nannochloropsis gaditana])

HSP 1 Score: 357.5 bits (916), Expect = 7.400e-95
Identity = 214/344 (62.21%), Postives = 239/344 (69.48%), Query Frame = 0

Query:  116 AFIIVPYRDLHPEQQRAKHLQRFLTELPRLLTAHIKGECEGEERNEK------------------------GVXXXXXXXXXXXXXXXXXXXPSYHIYIIEQSNDDRKFNRGKLLNIGFDIAFKDSKEAAYENEIEXXXXXXXXXXXXXXXXXXDSLAASVFVFHDVDLLPRSSLIPLYLTRPSLPVHIARAWKRYSGNPKYFGGAVAFNSQDFIRINGFPNTFWGWGGEDDEMRKRVDEAGLQVRKPTKKEEEGGMEDMEGVSLEEKLAVLRSNREWKCNVKWEVLAEHDETWNTNGLKDLKYAVLRREEMEIEREGGREGGRVTKVMVDVMANGHWTDTVFE 436
            + +IVPYRDL+PEQ+RA+HLQRFL E+P LLTA       G+    K                          XXXXXXXXXXXXXXXXX  P YHIYI+EQS D RKFNRGKLLNIGFD+A KD +                    XXXXXXX   AASVF+FHDVDLLP   L+PLYLTRPS P+HIARAW RYSGNP+Y GGA+AFN+ DF +INGFPNTFWGWGGEDDEMRKRV++ GL+V  P   EE G MEDMEGVSLEEKL  LR NREWKCNVKWE L EH ETW  NGLKDL+Y V+ REE+E E  GG  GGR+TK+ VDV  NGHWTDTV E
Sbjct:   91 SILIVPYRDLYPEQERARHLQRFLREMPALLTAF------GDPARRKTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPLYHIYIVEQSKDGRKFNRGKLLNIGFDVALKDGE------------------GTXXXXXXXXRAAASVFIFHDVDLLPSRELVPLYLTRPSRPLHIARAWGRYSGNPRYLGGAIAFNATDFQKINGFPNTFWGWGGEDDEMRKRVEQVGLEVGAPA-AEEGGRMEDMEGVSLEEKLQALRRNREWKCNVKWEALGEHAETWRQNGLKDLRYEVMGREELEGEVGGG--GGRITKLTVDVRENGHWTDTVVE 407

[Close]

BLAST of NO29G00880 vs. NCBI_GenBank
Match: GAX23870.1 (beta-1,4-galactosyltransferase 4 [Fistulifera solaris])

HSP 1 Score: 268.9 bits (686), Expect = 3.500e-68
Identity = 147/315 (46.67%), Postives = 190/315 (60.32%), Query Frame = 0

Query:  118 IIVPYRDLHPEQQRAKHLQRFLTELPRLLTAHIKGECEGEERNEKGVXXXXXXXXXXXXXXXXXXXPSYHIYIIEQSNDDRKFNRGKLLNIGFDIAFKDSKEAAYENEIEXXXXXXXXXXXXXXXXXXDSLAASVFVFHDVDLLPRSSLIPLYLTRPSLPVHIARAWKRYSGNPKYFGGAVAFNSQDFIRINGFPNTFWGWGGEDDEMRKRVDEAGLQVRKPTKKEEEGGMEDMEGVSLEEKLAVLRSNREWKCNVKWEVLAEHDETWNTNGLKDLKYAVLRREEMEIEREGGREGGRVTKVMVDVMANG-HWTD 432
            IIVP+RDLH  Q+RA HLQ+F+  + + L +  K   +G+  N                         YHIYIIEQS+D RKFNRGKLLNIGFD+A    ++AA  N                           VF+FHDVDLLP ++L   Y   P  P+HIAR WKRYS NPKYFGGAV+F+S D+ RING+PN +WGWGGEDDEM++R++  G+    PT+    G ++D+E ++L EKL  LRSN+ WK NVKWE+  EH++TW TNGL DLKY+VL+  E+    EGG      +K+ VDV  NG HWT+
Sbjct:   97 IIVPFRDLHAAQKRAAHLQQFIPHMVQFLGSLTK---DGKISN-------------------------YHIYIIEQSDDQRKFNRGKLLNIGFDVA----RKAAARNH-------------------------DVFIFHDVDLLPDAALGDWYAKFPKRPIHIARVWKRYSNNPKYFGGAVSFSSSDYKRINGYPNNYWGWGGEDDEMQRRLERLGITFEAPTR----GSLKDLEDMTLTEKLDFLRSNKAWKNNVKWELNDEHEKTWKTNGLADLKYSVLKTTEL----EGG--NNHASKITVDVKLNGSHWTN 344

[Close]

BLAST of NO29G00880 vs. NCBI_GenBank
Match: XP_002180427.1 (galactosyl transferase [Phaeodactylum tricornutum CCAP 1055/1] >EEC47835.1 galactosyl transferase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 267.7 bits (683), Expect = 7.800e-68
Identity = 141/315 (44.76%), Postives = 175/315 (55.56%), Query Frame = 0

Query:  118 IIVPYRDLHPEQQRAKHLQRFLTELPRLLTAHIKGECEGEERNEKGVXXXXXXXXXXXXXXXXXXXPSYHIYIIEQSNDDRKFNRGKLLNIGFDIAFKDSKEAAYENEIEXXXXXXXXXXXXXXXXXXDSLAASVFVFHDVDLLPRSSLIPLYLTRPSLPVHIARAWKRYSGNPKYFGGAVAFNSQDFIRINGFPNTFWGWGGEDDEMRKRVDEAGLQVRKPTKKEEEGGMEDMEGVSLEEKLAVLRSNREWKCNVKWEVLAEHDETWNTNGLKDLKYAVLRREEMEIEREGGREGGRVTKVMVDVMANG-HWTD 432
            +IVPYRD+H  QQRA HL +F+  + R     +K                                  YH YIIEQS+D RKFNRGKLLNIGFD+A K  +                              +  VF+FHDVDLLP+  L   Y   P  P+HIAR W RYS NPKYFGG V+F+S D+ RING+PNTFWGWGGEDDEM+KR++  G++   P K    G + D+E ++L EKL  LR+NREWKC VKWE L EH++TW  NG+ DLKY VL +  ++       E GR TK  VDV  NG HW +
Sbjct:  107 VIVPYRDIHSAQQRAAHLAKFVPHMQRFFNRLLKS----------------------------GKVSDYHFYIIEQSDDGRKFNRGKLLNIGFDLARKSKR------------------------------SHDVFIFHDVDLLPQDDLGSWYAKFPKSPIHIARVWGRYSNNPKYFGGVVSFSSSDYKRINGYPNTFWGWGGEDDEMQKRLERLGIRFESPPK----GTLVDLENMTLPEKLNFLRANREWKCMVKWEALEEHEKTWKINGMADLKYKVLEQTSLD-------ETGRATKATVDVQLNGDHWAN 352

[Close]

BLAST of NO29G00880 vs. NCBI_GenBank
Match: GAX11867.1 (beta-1,4-galactosyltransferase 4 [Fistulifera solaris])

HSP 1 Score: 264.6 bits (675), Expect = 6.600e-67
Identity = 145/315 (46.03%), Postives = 188/315 (59.68%), Query Frame = 0

Query:  118 IIVPYRDLHPEQQRAKHLQRFLTELPRLLTAHIKGECEGEERNEKGVXXXXXXXXXXXXXXXXXXXPSYHIYIIEQSNDDRKFNRGKLLNIGFDIAFKDSKEAAYENEIEXXXXXXXXXXXXXXXXXXDSLAASVFVFHDVDLLPRSSLIPLYLTRPSLPVHIARAWKRYSGNPKYFGGAVAFNSQDFIRINGFPNTFWGWGGEDDEMRKRVDEAGLQVRKPTKKEEEGGMEDMEGVSLEEKLAVLRSNREWKCNVKWEVLAEHDETWNTNGLKDLKYAVLRREEMEIEREGGREGGRVTKVMVDVMANG-HWTD 432
            IIVP+RDLH  Q+RA HLQ+F+  + + L         G  + +  +                    +YHIYIIEQS D RKFNRGKLLNIGFD+A    K AA +++                          VFVFHDVDLLP + L   Y   P  P+HIAR WKRYS NPKYFGGAV+F+S D+ RING+PN +WGWGGEDDEM++R++  G+    PT+    G ++D+E ++L EKL  LRSN+ WK NVKWE+  EH++TW TNGL DLKY+VL+  E+    +GG      +K+ VDV  NG HWT+
Sbjct:  102 IIVPFRDLHAAQKRAAHLQQFIPHMVQFL---------GNLKKDGKI-------------------SNYHIYIIEQSEDQRKFNRGKLLNIGFDVA---RKAAARKHD--------------------------VFVFHDVDLLPDADLGDWYAKFPKRPIHIARVWKRYSNNPKYFGGAVSFSSSDYKRINGYPNNYWGWGGEDDEMQRRLERLGITFEAPTR----GSLKDLEDMTLTEKLDFLRSNKAWKNNVKWELNDEHEKTWKTNGLADLKYSVLKTTEL----DGG--NNHASKITVDVKLNGNHWTN 349

[Close]

BLAST of NO29G00880 vs. NCBI_GenBank
Match: EJK61110.1 (hypothetical protein THAOC_18453 [Thalassiosira oceanica])

HSP 1 Score: 250.0 bits (637), Expect = 1.700e-62
Identity = 134/316 (42.41%), Postives = 180/316 (56.96%), Query Frame = 0

Query:  118 IIVPYRDLHPEQQRAKHLQRFLTELPRLLTAHIKGECEGEERNEKGVXXXXXXXXXXXXXXXXXXXPSYHIYIIEQSNDDRKFNRGKLLNIGFDIAFKDSKEAAYENEIEXXXXXXXXXXXXXXXXXXDSLAASVFVFHDVDLLPRSSLIPLYLTRPSLPVHIARAWKRY-SGNPKYFGGAVAFNSQDFIRINGFPNTFWGWGGEDDEMRKRVDEAGLQVRKPTKKEEEGGMEDMEGVSLEEKLAVLRSNREWKCNVKWEVLAEHDETWNTNGLKDLKYAVLRREEMEIEREGGREGGRVTKVMVDVMANG-HWTD 432
            IIVPYRDLHP Q RA+HLQ+F+  + R L+  +      +                            YHIYIIEQS+D RKFNRGKLLNIGFD + K S++    +                          ++F+FHDVDLLP++ L   Y   P+ P HIAR W RY + N KYFGG V+F+ +D  RING+PNTFWGWGGEDDEM+KR++  G+    P      G + D+E + ++ K+  LR N++WKC VKWE L EH+ TW +NGL DLKY +   ++++ +   G  G +VT + VDVM NG HW +
Sbjct:   73 IIVPYRDLHPTQNRARHLQQFVPHMKRFLSELVSNNAISD----------------------------YHIYIIEQSDDGRKFNRGKLLNIGFDYSVKRSEKHPPRH--------------------------NIFIFHDVDLLPQNDLAEWYGKYPTKPTHIARVWSRYAANNSKYFGGVVSFSEEDMKRINGYPNTFWGWGGEDDEMQKRLETLGITWVAP----PSGTIVDLEQMDIDTKMKFLRENKQWKCMVKWEALEEHESTWQSNGLSDLKYDIKGVKKLDQDDVDG-AGSKVTLLNVDVMLNGSHWAN 329

[Close]

BLAST of NO29G00880 vs. NCBI_GenBank
Match: CBN75383.1 (Beta-1,4-galactosyltransferase, family GT7 [Ectocarpus siliculosus])

HSP 1 Score: 248.4 bits (633), Expect = 4.900e-62
Identity = 139/317 (43.85%), Postives = 171/317 (53.94%), Query Frame = 0

Query:  118 IIVPYRDLHPEQQRAKHLQRFLTELPRLLTAHIKGECEGEERNEKGVXXXXXXXXXXXXXXXXXXXPSYHIYIIEQSNDD-RKFNRGKLLNIGFDIAFKDSKEAAYENEIEXXXXXXXXXXXXXXXXXXDSLAASVFVFHDVDLLPRSSLIPLYLTRPSLPVHIARAWKRYSGNPKYFGGAVAFNSQDFIRINGFPNTFWGWGGEDDEMRKRVDEAGLQVRKPTKKEEEGGMEDMEGVSLEEKLAVLRSNREWKCNVKWEVLAEHDETWNTNGLKDLKYAVLRREEMEIEREGGREGGRVTKVMVDVMANGHWTDTV 434
            ++VPYRDL P Q+R+ HL++F+  +   L   + G   GE                            + +Y++EQS DD  KFNRGKLLNIGFD+A K+                                 A VF+ HDVDLLP + L   Y T P  PVH+AR WK+YS NPKYFGG VAFN +DF  INGFPNTFWGWGGEDDEM  R+ EA L+     +K E G  +D+EG+ L  KL +LR N +WKC VK E L EH  TW  NGL DLKY VL R  +         G    K+ V+V  NGHWTDT+
Sbjct:   88 VVVPYRDLDPAQRRSAHLEQFVPYMEDFLERAV-GGAGGE----------------------------FRVYVVEQSTDDGLKFNRGKLLNIGFDLARKE--------------------------------GAQVFLLHDVDLLPSNELARWYATVPERPVHVARVWKQYSNNPKYFGGVVAFNRKDFEAINGFPNTFWGWGGEDDEMYSRIVEARLE----PQKAEVGEFKDLEGLDLPTKLNLLRQNEQWKCQVKKEALEEHSNTWRQNGLADLKYKVLGRTSL---------GKGTEKITVEVGLNGHWTDTI 330

[Close]

BLAST of NO29G00880 vs. NCBI_GenBank
Match: XP_009521480.1 (hypothetical protein PHYSODRAFT_484003 [Phytophthora sojae] >EGZ26192.1 hypothetical protein PHYSODRAFT_484003 [Phytophthora sojae])

HSP 1 Score: 223.4 bits (568), Expect = 1.700e-54
Identity = 124/316 (39.24%), Postives = 162/316 (51.27%), Query Frame = 0

Query:  118 IIVPYRDLHPEQQRAKHLQRFLTELPRLLTAHIKGECEGEERNEKGVXXXXXXXXXXXXXXXXXXXPSYHIYIIEQSNDDRKFNRGKLLNIGFDIAFKDSKEAAYENEIEXXXXXXXXXXXXXXXXXXDSLAASVFVFHDVDLLPRSSLIPLYLTRPSL-PVHIARAWKRYSGNPKYFGGAVAFNSQDFIRINGFPNTFWGWGGEDDEMRKRVDEAGLQVRKPTKKEEEGGMEDMEGVSLEEKLAVLRSNREWKCNVKWEVLAEHDETWNTNGLKDLKYAVLRREEMEIEREGGREGGRVTKVMVDVMANGHWTDT 433
            ++VP+RD HP QQR  HL  F+  +   L  H   +                               S+HI+I+EQS D RKFNRGKLLN GFD+A  D                                   VF+FHDVDLLP   L   Y T P L P+H+AR W RY+ +  YFGG VAF  Q FI++NGFPN FWGWGGED+E+  RV    L +  P+     G + D+E ++LEEKL +LR+N+ WKC VK E+L EH  TW  NGLK+L+Y  +  E + +           TK+ V +  NGHW+D+
Sbjct:    9 VLVPFRDNHPAQQRRAHLDEFVPYMTEFLQRHCASK-----------------------------SASFHIFILEQSMDGRKFNRGKLLNAGFDMARND---------------------------------YDVFIFHDVDLLPGDDLAEFYTTVPRLGPMHVARVWDRYNESSNYFGGIVAFTRQQFIKVNGFPNNFWGWGGEDNELYSRVMRKKLTIEAPS----SGTIRDLEELNLEEKLVLLRTNK-WKCTVKHELLKEHHRTWKKNGLKNLRYEYVDAEAINV---------NCTKITVKLGPNGHWSDS 248

[Close]

BLAST of NO29G00880 vs. NCBI_GenBank
Match: XP_002905242.1 (Putative beta-1,4-galactosyltransferase [Phytophthora infestans T30-4] >EEY53624.1 Putative beta-1,4-galactosyltransferase [Phytophthora infestans T30-4])

HSP 1 Score: 217.2 bits (552), Expect = 1.200e-52
Identity = 127/316 (40.19%), Postives = 164/316 (51.90%), Query Frame = 0

Query:  118 IIVPYRDLHPEQQRAKHLQRFLTELPRLLTAHIKGECEGEERNEKGVXXXXXXXXXXXXXXXXXXXPSYHIYIIEQSNDDRKFNRGKLLNIGFDIAFKDSKEAAYENEIEXXXXXXXXXXXXXXXXXXDSLAASVFVFHDVDLLPRSSLIPLYLTRPSL-PVHIARAWKRYSGNPKYFGGAVAFNSQDFIRINGFPNTFWGWGGEDDEMRKRVDEAGLQVRKPTKKEEEGGMEDMEGVSLEEKLAVLRSNREWKCNVKWEVLAEHDETWNTNGLKDLKYAVLRREEMEIEREGGREGGRVTKVMVDVMANGHWTDT 433
            ++VP+RD HP Q+R  HL  F+      +T  +K  C G+                           S+HI+IIEQS D RKFNRGKLLN GFD+A  D                                   V++FHDVDLLP   L  LY T PSL P+HIAR W RY+ +  YFGG VAF  Q FI++NGFPN FWGWGGED+E+  RV    L ++ PT     G + D+E ++LEEKL VLR+++  KC VK ++L EH  TW  NGLK L Y  +  E +             TK+ V +  NGHW+D+
Sbjct:    9 VLVPFRDSHPAQKRHAHLDEFVP----FMTEFLKRNCAGKS-------------------------ASFHIFIIEQSLDGRKFNRGKLLNAGFDMARND---------------------------------YDVYIFHDVDLLPGDDLGELYTTVPSLGPMHIARLWDRYNESSTYFGGIVAFTRQQFIKVNGFPNNFWGWGGEDNELYSRVVRKKLAIQAPT----SGTIRDLEDLNLEEKLTVLRTSKV-KCTVKRDLLKEHHRTWKKNGLKSLCYEYVNAEAI---------NENCTKITVKLGPNGHWSDS 248

[Close]

BLAST of NO29G00880 vs. NCBI_GenBank
Match: ETI36084.1 (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETL82976.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM36202.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETO64805.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976] >ETP34015.1 hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 210.7 bits (535), Expect = 1.100e-50
Identity = 121/316 (38.29%), Postives = 161/316 (50.95%), Query Frame = 0

Query:  118 IIVPYRDLHPEQQRAKHLQRFLTELPRLLTAHIKGECEGEERNEKGVXXXXXXXXXXXXXXXXXXXPSYHIYIIEQSNDDRKFNRGKLLNIGFDIAFKDSKEAAYENEIEXXXXXXXXXXXXXXXXXXDSLAASVFVFHDVDLLPRSSLIPLYLTRPSL-PVHIARAWKRYSGNPKYFGGAVAFNSQDFIRINGFPNTFWGWGGEDDEMRKRVDEAGLQVRKPTKKEEEGGMEDMEGVSLEEKLAVLRSNREWKCNVKWEVLAEHDETWNTNGLKDLKYAVLRREEMEIEREGGREGGRVTKVMVDVMANGHWTDT 433
            ++VP+RD HP Q+R   L  F+  +   L  H                                   S+HI+II+QS D RKFNRGKLLN GFD+A  D                                   +++FHDVDLLP   L  LY T P+L P+HIAR W RY+ +  YFGG VAF  Q FI++NGFPN FWGWGGED+E+  RV      ++ P      G + D+EG++LEEKLAVLR+++  KC VK+++L EH  TW  NGLK+L Y  +  E +             TK+ V +  NGHW+D+
Sbjct:   68 VLVPFRDNHPAQKRQAQLDEFVPYMTEFLKRH-----------------------------CALKSASFHIFIIDQSLDGRKFNRGKLLNAGFDMARND---------------------------------YDLYIFHDVDLLPGDDLGELYTTIPTLGPMHIARVWDRYNESSTYFGGIVAFTFQQFIKVNGFPNNFWGWGGEDNELYSRVVRKKFSIQAPA----SGTIRDLEGLNLEEKLAVLRTSKV-KCTVKYDLLKEHHRTWKKNGLKNLHYEYVNAEAI---------NENCTKITVKLGPNGHWSDS 307

[Close]

BLAST of NO29G00880 vs. NCBI_GenBank
Match: XP_008896211.1 (hypothetical protein PPTG_04136 [Phytophthora parasitica INRA-310] >ETK76307.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL29749.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETN18563.1 hypothetical protein PPTG_04136 [Phytophthora parasitica INRA-310] >ETP05895.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 210.7 bits (535), Expect = 1.100e-50
Identity = 121/316 (38.29%), Postives = 161/316 (50.95%), Query Frame = 0

Query:  118 IIVPYRDLHPEQQRAKHLQRFLTELPRLLTAHIKGECEGEERNEKGVXXXXXXXXXXXXXXXXXXXPSYHIYIIEQSNDDRKFNRGKLLNIGFDIAFKDSKEAAYENEIEXXXXXXXXXXXXXXXXXXDSLAASVFVFHDVDLLPRSSLIPLYLTRPSL-PVHIARAWKRYSGNPKYFGGAVAFNSQDFIRINGFPNTFWGWGGEDDEMRKRVDEAGLQVRKPTKKEEEGGMEDMEGVSLEEKLAVLRSNREWKCNVKWEVLAEHDETWNTNGLKDLKYAVLRREEMEIEREGGREGGRVTKVMVDVMANGHWTDT 433
            ++VP+RD HP Q+R   L  F+  +   L  H                                   S+HI+II+QS D RKFNRGKLLN GFD+A  D                                   +++FHDVDLLP   L  LY T P+L P+HIAR W RY+ +  YFGG VAF  Q FI++NGFPN FWGWGGED+E+  RV      ++ P      G + D+EG++LEEKLAVLR+++  KC VK+++L EH  TW  NGLK+L Y  +  E +             TK+ V +  NGHW+D+
Sbjct:   68 VLVPFRDNHPAQKRQAQLDEFVPYMTEFLKRH-----------------------------CALKSASFHIFIIDQSLDGRKFNRGKLLNAGFDMARND---------------------------------YDLYIFHDVDLLPGDDLGELYTTIPTLGPMHIARVWDRYNESSTYFGGIVAFTFQQFIKVNGFPNNFWGWGGEDNELYSRVVRKKFSIQAPA----SGTIRDLEGLNLEEKLAVLRTSKV-KCTVKYDLLKEHHRTWKKNGLKNLHYEYVNAEAI---------NENCTKITVKLGPNGHWSDS 307

The following BLAST results are available for this feature:

BLAST of NO29G00880 vs. NCBI_GenBank

BLAST of NO29G00880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM21309.1	7.400e-95	62.21	beta- -galactosyltransferase 3 [Nannochloropsis ga...	[more]
GAX23870.1	3.500e-68	46.67	beta-1,4-galactosyltransferase 4 [Fistulifera sola...	[more]
XP_002180427.1	7.800e-68	44.76	galactosyl transferase [Phaeodactylum tricornutum ...	[more]
GAX11867.1	6.600e-67	46.03	beta-1,4-galactosyltransferase 4 [Fistulifera sola...	[more]
EJK61110.1	1.700e-62	42.41	hypothetical protein THAOC_18453 [Thalassiosira oc...	[more]
CBN75383.1	4.900e-62	43.85	Beta-1,4-galactosyltransferase, family GT7 [Ectoca...	[more]
XP_009521480.1	1.700e-54	39.24	hypothetical protein PHYSODRAFT_484003 [Phytophtho...	[more]
XP_002905242.1	1.200e-52	40.19	Putative beta-1,4-galactosyltransferase [Phytophth...	[more]
ETI36084.1	1.100e-50	38.29	hypothetical protein, variant 1 [Phytophthora para...	[more]
XP_008896211.1	1.100e-50	38.29	hypothetical protein PPTG_04136 [Phytophthora para...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL061	nonsL061	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR038	ncniR038	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR081	ngnoR081	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK005208	NSK005208	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO29G00880.1	NO29G00880.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|188147	gene_8260	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100535g2	gene9115	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO29G00880.1	NO29G00880.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO29G00880 ID=NO29G00880|Name=NO29G00880|organism=Nannochloropsis oceanica|type=gene|length=1815bp
ATGGAGTCTGCGGCCGTCATGGCAAATTTGGAGATGGCCGAGACACCAAG
GGAAGGAGCATCGGCACCGGCACCAGCACAAGCGACCTATGCACTCACTG
GCAGCACGAGCAGCACAAATGACAAGAAGAGCAGTAATAGCGGTGCCAAC
ACCAACAGTGGTAGCAACAATGCTAATGGCGACGTCGTCGCGCGGCAAGC
ACAAAGCGCAAACGCTCCCCCCCCCAAAGCAGCCAGCAGCCCAACGACAA
CTACCCCTGCTGCTGCTGTTGCTGGTGCTGGTGCTGCTGCCAGTACCGCC
GCCATCCCTTCATCGAATGAAAGAGGGGGGAAAAGAGGTGGGAAGGCTTT
TATTATCGTCCCTTATCGTGACCTACACCCAGAGCAGCAACGCGCGAAGC
ACTTACAACGTTTTCTGACGGAGCTACCCCGCTTGCTTACCGCTCACATA
AAAGGAGAATGTGAAGGCGAAGAACGTAACGAAAAAGGGGTCGAGGAGAA
AAGAAGGAAAGTAGTCGGAGGAGATGGAGGAGGAGGAGCATCAATCCTGC
CGTCTTACCACATCTACATCATCGAGCAAAGCAACGACGACCGTAAGTTC
AACCGTGGGAAGCTCCTTAACATCGGCTTTGACATCGCCTTTAAGGACTC
AAAAGAGGCAGCATACGAAAATGAGATTGAGAATAATGAGAAGGAGGAAG
ATGAGGAGGATAGAACTAGGGAAGGCGAGAGAGAAGACTCTCTAGCGGCT
TCGGTTTTCGTTTTCCATGATGTCGATTTATTGCCCCGCTCGTCCCTGAT
TCCTCTTTATTTGACACGACCTTCCCTCCCTGTGCATATTGCAAGAGCTT
GGAAGAGGTACAGTGGCAACCCCAAATATTTTGGTGGGGCTGTGGCATTT
AATTCCCAGGATTTCATAAGGATTAATGGCTTTCCGAATACGTTTTGGGG
ATGGGGAGGGGAAGATGACGAGATGCGAAAGAGAGTGGATGAGGCAGGAT
TGCAAGTACGGAAACCGACGAAGAAGGAGGAGGAAGGAGGGATGGAGGAC
ATGGAGGGGGTAAGTTTGGAGGAGAAGCTGGCGGTCTTGCGGAGTAATAG
GGAGTGGAAATGTAACGTCAAGTGGGAGGTACTCGCCGAGCATGATGAGA
CCTGGAATACGAACGGTTTAAAGGATTTGAAATATGCAGTGTTGAGGAGA
GAGGAGATGGAAATAGAAAGGGAGGGAGGAAGGGAAGGAGGGAGGGTGAC
GAAGGTGATGGTGGATGTGATGGCGAATGGACATTGGACCGACACGGTTT
TCGAAGGCGGGCCGTCCTCAGGAGGAGGGAGAAGAGGAGGGGGAGGAGGA
GGGGGAGGAGGCAACAGCGGGTGGAAGAGGAGGGACGGCAATAATGGTGG
TGATGATAGAGATAGAGAGCAAGATCGTAAGCCTTTGCATGGTGGCGGTG
GTTGGCGAGTTGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGAAGGAGGAGGAGGGGAAAGAAGAGGGAGAGGGGGAGGAGGATC
TGACTATCGAGGGTGGAGAGATGATGATCGGACGCACAAGAAACGACGAA
CTTAAAAATGAGGATTTCGAAAAAAGTGAAACGGAAAGAAAGAATCAATG
TGCAAGATACCATGAACAGGCCTCAACGACAACACTACGATGACAAGAAC
AATAACAACAACATCAATATCGACAAAGAAATGAAAGAGAAAGAGGAGAA
AAAGAGGAAGGGAAAGAAGGGGAGATACCATACACTTAGGTTATCTATTT
TTCCTTCACTCCTTG

protein sequence of NO29G00880.1

>NO29G00880.1-protein ID=NO29G00880.1-protein|Name=NO29G00880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=535bp
MESAAVMANLEMAETPREGASAPAPAQATYALTGSTSSTNDKKSSNSGAN
TNSGSNNANGDVVARQAQSANAPPPKAASSPTTTTPAAAVAGAGAAASTA
AIPSSNERGGKRGGKAFIIVPYRDLHPEQQRAKHLQRFLTELPRLLTAHI
KGECEGEERNEKGVEEKRRKVVGGDGGGGASILPSYHIYIIEQSNDDRKF
NRGKLLNIGFDIAFKDSKEAAYENEIENNEKEEDEEDRTREGEREDSLAA
SVFVFHDVDLLPRSSLIPLYLTRPSLPVHIARAWKRYSGNPKYFGGAVAF
NSQDFIRINGFPNTFWGWGGEDDEMRKRVDEAGLQVRKPTKKEEEGGMED
MEGVSLEEKLAVLRSNREWKCNVKWEVLAEHDETWNTNGLKDLKYAVLRR
EEMEIEREGGREGGRVTKVMVDVMANGHWTDTVFEGGPSSGGGRRGGGGG
GGGGNSGWKRRDGNNGGDDRDREQDRKPLHGGGGWRVGEGGGGGGGGGGG
GGEGGGGERRGRGGGGSDYRGWRDDDRTHKKRRT*

Synonyms

Publications