NO29G00860, NO29G00860 (gene) Nannochloropsis oceanica

Overview
NameNO29G00860
Unique NameNO29G00860
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3836
Alignment locationchr29:307007..310842 +

Link to JBrowse

Properties
Property NameValue
Descriptionswitch 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:307007..310842 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR000330SNF2_N
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
Homology
BLAST of NO29G00860 vs. NCBI_GenBank
Match: CBJ28871.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 437.2 bits (1123), Expect = 1.500e-118
Identity = 290/771 (37.61%), Postives = 398/771 (51.62%), Query Frame = 0
Query:  169 EAEKSEDENHDGEELYPIFDNPMCLGP-EKPLVLGYEEQEGGDGRQRAVQVPMAAARYLFGYQEEGVKWLY---GHYKAKAGCILGDTMGLGKTIQVVCLMLAVFGKKGLQSDAVELRERQQMLRRGAREEVKGQAVLVVCPSSVIDQWLKAFAVWGKFAVSDL-----RGSKEETEGVLSDTRIGAIDIVVCSYEGMHGSKCGFRLKQIHWRMVVFDEFHKVKNKETQVAQAAGK-IKAHVKIGLTGTPVQNAYNELWALLSIVAPHLAGTSADFYNTYTIPINRGNKRGASSEVISKSNAARVSLESLLSHVLLKRHGSMIADQLKGKSEYVVFCKLTPMQYAIYERVLALPEFQMLLHRKELCDCGRRDATRGKCCYRVPLVPTHPQXXXXXXXXXXXXXXXXXXRTIDPRALLWRQHHPEGIACNR---CPSCLSFAVITKLQKIANHPSLLQNDDSVSPRSSSSLSSTCLPHPFSSSAEATR---AFAELAFGPK---YLAEMGGTD------------------------------RPTNLRFLLNAIPKQSGKLRDLDRLLKTFSPSEKVLIFSLSVQMLRLLQVFATIQGYSFLSLDGSTPGGERQGTIDKFINDKSI--TLFFISTKAGGLGLNLTCASKVVIFDVNWNPSHDLQAMDRSYRLGQSRDVQVYRFVAQGTIEEVCYMRQIYKQQLNSLALERVTVRRPSSPVAGMGKKKGGRTDSVKFDSVQGIKGEEGELFGVENLLRLQKEPFILDARKKF 889
            E E  +D + +GE L P   NP    P ++PLVL  E      G +RA +VP +A RYL GYQ EGV+++Y    H     G IL D MGLGKT+Q + L+LA+  K G + D ++++ R+          V G+ VL+VCP SV+  W      WG F  + +         E  + V S  + G +++VV   E M  +     L +  W   VFDEFH  KN  T   +A  K + A V IGLTGT VQN  +E W+LL+ V P   G   DF   +T PI RG KRGAS   +         +      V+L+R   ++ D LKGK   VVFC LT +Q  +Y  VL+LPEF++L +  + C CGR DA  G CC   P   T                       +DPRA++WR+ HP+   C +   CP C SF+ I+KLQK+ANHPSLLQ    V P           P+ +  +A       AFA +AF  +    +A++ G                                RP N  FL        GK+R L  LL+ F    KVL+FS S  ML +LQ   + QGY+FL LDG+T   +RQ  ID+F    +I   +F IST AGG GLNL  ASKV+++DVNWNP+ D QA DR+YR+GQ ++V+V+R V+ GTIEE+ YMRQIYK Q ++               A MG+K  G     +F+ VQG++ E+GEL+G+ NL++   E  +L+ R+K+
Sbjct:  233 EGETDDDLDDEGEGLKPTIRNPPFEDPGKRPLVLTNEA-----GGERA-EVPASANRYLQGYQREGVEFMYRRVRHTDGPKGVILADDMGLGKTVQTIALLLALLKKTGTRRDRMDIKRRKDC---KGHVSVAGKPVLIVCPRSVLPNWTGHLKTWGHFETACITSGGSTAGPESLQRVESRLKAGLLEVVVVG-ETMFANSIE-TLSEFDWLTAVFDEFHHYKNPYTNKNRAVQKLVNAEVFIGLTGTLVQNNLDEYWSLLNTVQPGCVGRQDDFKRHFTEPILRGRKRGASRADVLLGRERIDEMGVTRDKVVLRRVKDILGDLLKGKIGTVVFCNLTHVQKLVYRTVLSLPEFKLLANASDPCPCGRPDARSGSCCGMWPQDDTSED-------------------LVDPRAVIWRRFHPDLEVCKKGPGCPYCCSFSAISKLQKLANHPSLLQ----VKP-----------PYKYGENAHKMLDDIAFANVAFSEEARVIMADLPGQHGGGAXXXXXXXXXXXXXXXXXXXXWDRRLARPEN--FLQLCRDDTCGKMRTLKVLLERFKNKHKVLLFSYSTAMLDILQALCSSQGYTFLKLDGNTAKDQRQKMIDRFTKQNAIQNNVFLISTTAGGTGLNLQAASKVILYDVNWNPAQDAQAEDRAYRIGQLKEVEVFRLVSTGTIEELTYMRQIYKLQTSA---------------ATMGEKAEGGLR--QFEGVQGVREEQGELWGISNLMKFSGESMLLELRQKY 939          
BLAST of NO29G00860 vs. NCBI_GenBank
Match: CBJ49262.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 436.8 bits (1122), Expect = 2.000e-118
Identity = 267/714 (37.39%), Postives = 394/714 (55.18%), Query Frame = 0
Query:  181 EELYPIFDNPMCLGPEKPLVLGYEEQEGGDGRQRAVQVPMAAARYLFGYQEEGVKWLYGHYKAKAGCILGDTMGLGKTIQVVCLMLAVFGKKGLQSDAVELRERQQMLRRGAREEVKGQAVLVVCPSSVIDQWLKAFAVWGKFAVSDLRGSKEETEGVLSDTRIGAIDIVVCSYEGMHGSKCGFRLKQIHWRMVVFDEFHKVKNKETQVAQAAGKIKAHVKIGLTGTPVQNAYNELWALLSIVAPHLAGTSADFYNTYTIPINRGNKRGASSEVISKSNAARVSLESLLSHVLLKR-HGSMIADQLKGKSEYVVFCKLTPMQYAIYERVLALPEFQMLLHRKELCDCGRRD-ATRGKCCYRVPLVPTHPQXXXXXXXXXXXXXXXXXXRTIDPRALLWRQHHPEGIACNRCPSCLSFAVITKLQKIANHPSLLQNDDSVSPRSSSSLSSTCLPHPFSSSAEATRAFAELAFGPKYLAEMGGTDRPTNLRFLLNAIPKQSGKLRDLDRLLKTFSPS-EKVLIFSLSVQMLRLLQVFATIQGYSFLSLDGSTPGGERQGTIDKFINDKS-ITLFFISTKAGGLGLNLTCASKVVIFDVNWNPSHDLQAMDRSYRLGQSRDVQVYRFVAQGTIEEVCYMRQIYKQQLNSLALERVTVRRPSSPVAGMGKKKGGRTDSVKFDSVQGIKGEEGELFGVENLLRLQKEPFILDARKKFRA 891
            E+L P  ++P  LG   P  LG    EGG        +  +  RYL  YQ EGV+WLY  ++A  G ILGD MGLGKT+Q + L+ +V  K G   D+ ELR R+   + G      G   L+V P++V+ +W+K   VWG FA   L  S  + + ++   + G  ++V  SY+ +    C  RLK+  +  V+FDE+H +K+  T V+QAA +++     GLTGT +QN   ELW LL ++ P   G  + F   ++ PI R     A++            L+ +    +++R     + D LKGKS+ VVFC L+ +Q  +Y+RVL+LPEFQ+L   KE C+CGR    TR +CC++ P                           +DPRA+L+R+ HP  + C++CP C     ++KLQKIANHP LLQ +               +  P     +  R FAE+AF  +    MGG +R  + +FL  +     GK++ L+ LL  F  + +KVL+FS S  ML +L+ F   +GY +  LDG+T   ERQ  I++F +D++ + +F IST+AGG GLNL  AS+VV++DVNWNP+  LQA DR+YR+GQ R V V+R +++GTIEE+CYMRQIYK Q+ S A+                + +GGR    +F++VQG K ++GELFG++NLL+   +  +   R K  A
Sbjct:  429 EDLKPHIEDPPWLGKLVPFDLG----EGG-------FINPSINRYLRDYQREGVRWLYAKFQAGQGGILGDDMGLGKTVQSIALLASVLRKSGTGRDSEELRRRR---KEGLPASSTGLPWLIVAPAAVVPEWIKQIKVWGHFAAYQLE-SGRDADDLMVALKAGRYEVVATSYDLLRA--CVDRLKKQRFDAVIFDEYHTIKSATTMVSQAACELRTKRVFGLTGTLIQNDMKELWFLLHLIDPLAVGEQSRFTEHFSEPIKRARAMNATASDRRLGEKRLKELDGIRDKNMIRRTKDEELGDVLKGKSDTVVFCDLSEVQRELYQRVLSLPEFQLLARAKEPCNCGRSGRPTRARCCHKTP------------------DSRGGGGDGVDPRAVLFRRLHPTLMECDKCPFCCQLPAVSKLQKIANHPCLLQEN---------------IRDP-EHKRQQQRQFAEVAFTDRAREIMGGLER--SQKFLDVSKVGVCGKMKSLETLLAKFHETRDKVLVFSWSTAMLDVLESFVGAKGYVYRRLDGTTSSKERQARINEFNSDRAGVFVFLISTRAGGQGLNLHTASRVVLYDVNWNPALGLQAQDRAYRIGQKRKVAVFRLISKGTIEEMCYMRQIYKLQITSAAMG--------------DQARGGRR---QFNAVQGSKEQQGELFGIQNLLKFSDDSLLKTLRMKHEA 1072          
BLAST of NO29G00860 vs. NCBI_GenBank
Match: OQR94152.1 (DNA repair and recombination protein RAD26 [Achlya hypogyna])

HSP 1 Score: 395.2 bits (1014), Expect = 6.500e-106
Identity = 250/664 (37.65%), Postives = 351/664 (52.86%), Query Frame = 0
Query:  214 RAVQVPMAAARYLFGYQEEGVKWLYGHYKAKAGCILGDTMGLGKTIQVVCLMLAVFGKKGLQSDAVELRERQQMLRRGAREEVKG--QAVLVVCPSSVIDQWLKAFAVWGKFAVSDLRGSKEETEGVLSDTRIGAIDIVVCSYEGMHGSKCGFRLKQIHWRMVVFDEFHKVKNKETQVAQAAGKIKAHVKIGLTGTPVQNAYNELWALLSIVAPHLAGTSADFYNTYTIPINRGNKRGASSEVISKSNAARVSLESLLSHVLLKRHGSMIAD-QLKGKSEYVVFCKLTPMQYAIYERVLALPEFQMLLHRKELCDCGRRDATRGKCCYRVPLVPTHPQXXXXXXXXXXXXXXXXXXRTIDPRALLWRQHHPEGIACNRCPSCLSFAVITKLQKIANHPSLLQNDDSVSPRSSSSLSSTCLPHPFSSSAEATRAFAELAFGPKYLAEMGGTDRPTNLRFLLNAIPKQSGKLRDLDRLLKTFS-PSEKVLIFSLSVQMLRLLQVFATIQGYSFLSLDGSTPGGERQGTIDKFINDKSITLFFISTKAGGLGLNLTCASKVVIFDVNWNPSHDLQAMDRSYRLGQSRDVQVYRFVAQGTIEEVCYMRQIYKQQLNSLALERVTVRRPSSPVAGMGKKKGGRTDSVKFDSVQGIKGEEGELFGVENLL 874
            R +QVP    R+L  YQ EGV W++       G ILGD MGLGKT+QV+ L+ A+  K G   D    R R    R     +V G    +L+V P+S++  W     VW       L G   E E VL+    G  D+V+CSY+ +       +++ + W +VV DE H +KN E +  QA   ++   ++GLTGT +QN  +EL  LL  +     G+ +DF   Y   I    K+ A+ E ++++ A    L + L    L+R  ++        KS+ +VFC+LTP+Q   YERVLA  +F +L    E CDCG RD  R +CC+                                   +LWRQHHP+G AC  CP+CL F  I +L K++NH  LL+ D +    +   + +T            TRAFA++AFG    A  G  D+   L   +N  P   GK+  L++LL T++   EKVL+FS SV+ML +LQ F      +F+ LDGST   ER   + +F  D+S+ +F IST+AGGLGLN+T A+ VVIFD +WNP+HD QA DR+YR+GQ++DV+V+R V  GTIEE+ Y RQIYKQQL    L                K  GG      F+++ G+KG+ GELFG+ NLL
Sbjct:  307 RPIQVPGRLNRFLQPYQREGVAWMFQAIVDNRGAILGDEMGLGKTVQVIALLSALLFKTGTAEDKAAFR-RLAPQRDALVFDVNGTPPPILIVVPASLLANWELELKVWMCCRPVILNGKPAEREAVLAGLHRGTHDVVICSYDMLKSHL--VQIQAVPWYLVVLDEMHNLKNPEARTTQAVRALRCTRRLGLTGTLMQNDTDELHCLLETIHSGALGSLSDFRAYYADDIKFARKKSAAPEAVARARAKEQQLRARLEPYYLRRDKAVHPTFATVHKSDKIVFCELTPLQRRAYERVLASADFTVLARGDERCDCG-RDQRRRRCCHTT-------------------------------GGVLWRQHHPDGKACASCPACLQFPCIAQLLKLSNHLDLLRVDRT----APDDVQAT------------TRAFAKVAFGEDLEAAGGSLDQAQGLFEKMN--PALCGKMVVLEKLLTTWARRHEKVLLFSRSVRMLDILQSFLVALACAFVRLDGSTKVDERLRLVQRFNADRSLRVFLISTRAGGLGLNITSATNVVIFDPSWNPAHDCQAQDRAYRIGQTKDVKVFRLVTLGTIEEMIYARQIYKQQLADTTL----------------KGTGGPR---YFEAIIGVKGQHGELFGIRNLL 898          
BLAST of NO29G00860 vs. NCBI_GenBank
Match: XP_024522854.1 (switch 2 [Selaginella moellendorffii])

HSP 1 Score: 387.1 bits (993), Expect = 1.800e-103
Identity = 252/700 (36.00%), Postives = 362/700 (51.71%), Query Frame = 0
Query:  194 GPEKPLVLGYEEQEGGDGRQRAVQVPMAAARYLFGYQEEGVKWLYGHYKAKAGCILGDTMGLGKTIQVVCLMLAVFGKKGLQSDAVELRERQQMLRRGAREEVKGQAVLVVCPSSVIDQWLKAFAVWGKFAVSDLRGSKEETEGVLSDTRIGAIDIVVCSYE--GMHGSKCGFRLKQIHWRMVVFDEFHKVKNKETQVAQAAGKIKAHVKIGLTGTPVQNAYNELWALLSIVAPHLAGTSADFYNTYTIPINRGNKRGASSEVISKSNAARVSLESLLSHVLLKR-HGSMIADQLKGKSEYVVFCKLTPMQYAIYERVLALPEFQMLLHRKELCDCGRRDATRGKCCYRVPLVPTHPQXXXXXXXXXXXXXXXXXXRTIDPRALLWRQHH---PEGIACNRCPSCLSFAVITKLQKIANHPSLLQND--DSVSPRSSSSLSSTCLPHPFSSSAEATRAFAELAFGPKYLAEMGGTDRPTNLRFLLNAIPKQSGKLRDLDRLL-KTFSPSEKVLIFSLSVQMLRLLQVFATIQGYSFLSLDGSTPGGERQGTIDKFINDKSITLFFISTKAGGLGLNLTCASKVVIFDVNWNPSHDLQAMDRSYRLGQSRDVQVYRFVAQGTIEEVCYMRQIYKQQLNSLALERVTVRRPSSPVAGMGKKKGGRTDSVKFDSVQGIKGEEGELFGVENLLR-LQKEPFILD 884
            GP +PLVL  EE          V+VP      L  +Q EGV++LY  YK K G ILGD MGLGKTIQ +  + A+    G +   +  R +  +       E K + VLV+CP+SVI+ W + F  WG F +    G+  + E ++   R   +D+V+ S++   +HGS     L++I W  V+ DE H++KN+++Q+ +A  +++   + GLTGT +QN   +L+ +    AP   GT   F   Y  PI +G K  AS  ++  +   R  L ++L    L+R     I   LKGK + V+FC ++P+Q  +Y+R+L  P+FQ L+ + E C CG  + +  KCC R                               P+  +W   H   P+G  C  CP CL    + KLQ+++NH  LL+ +  D +  R   +                  AFA L FG      +GG     +  FL  +  +  GK+  L  LL K  S  +KVL+FS SV+ML +L+ F   +GY F  LDGSTP   RQG +D+F    S  +F IST+AGGLGLNL  A++VV+FD NWNP+ DLQA DRS+R GQ R V V+R +A G++EE+ Y RQIYKQQL +LA+                    G  +   F+ VQ  KG++GELFG+ NL R LQ + F  D
Sbjct:   91 GPYEPLVLSDEES------PERVEVPAPINSRLLEHQREGVRFLYNLYKQKIGGILGDDMGLGKTIQSIAFIAAILHNDG-ELFRLPFRSKANL------SEAKKKVVLVLCPTSVIENWQREFEAWGSFPLGVYHGA--QREAIVDKVRRDELDVVITSHDTFRIHGSS----LQEIDWDCVIVDEAHRLKNEKSQLYKACCRLRTKCRFGLTGTILQNKLIDLFNVFEWAAPGCLGTREHFRGYYDEPIKQGQKISASQVLVELAEKRRQHLLAVLRRYSLRRTKDETIGHLLKGKEDIVIFCAMSPIQRRVYKRLLESPDFQCLVRKNEPCGCGSEEPS-SKCCLRTA-----------------------------PKGPIWSYLHKGNPDG--CESCPCCLVLPCLNKLQQVSNHLELLKPNLSDDIEKRRKDA------------------AFASLVFGDD-APSLGGIQPDES--FLGLSDSQNCGKMLALKNLLSKWTSQGDKVLLFSYSVRMLGILEKFLIRRGYCFCRLDGSTPMNARQGIVDEFNTSPSKQVFLISTRAGGLGLNLVSANRVVVFDPNWNPAQDLQAQDRSFRFGQKRHVTVFRLLAAGSLEELIYTRQIYKQQLFNLAVT-------------------GNREKRYFEGVQDSKGDKGELFGLSNLFRDLQDKVFTSD 699          
BLAST of NO29G00860 vs. NCBI_GenBank
Match: XP_002972978.1 (switch 2 [Selaginella moellendorffii] >EFJ26199.1 hypothetical protein SELMODRAFT_413336 [Selaginella moellendorffii])

HSP 1 Score: 386.7 bits (992), Expect = 2.300e-103
Identity = 251/700 (35.86%), Postives = 363/700 (51.86%), Query Frame = 0
Query:  194 GPEKPLVLGYEEQEGGDGRQRAVQVPMAAARYLFGYQEEGVKWLYGHYKAKAGCILGDTMGLGKTIQVVCLMLAVFGKKGLQSDAVELRERQQMLRRGAREEVKGQAVLVVCPSSVIDQWLKAFAVWGKFAVSDLRGSKEETEGVLSDTRIGAIDIVVCSYE--GMHGSKCGFRLKQIHWRMVVFDEFHKVKNKETQVAQAAGKIKAHVKIGLTGTPVQNAYNELWALLSIVAPHLAGTSADFYNTYTIPINRGNKRGASSEVISKSNAARVSLESLLSHVLLKR-HGSMIADQLKGKSEYVVFCKLTPMQYAIYERVLALPEFQMLLHRKELCDCGRRDATRGKCCYRVPLVPTHPQXXXXXXXXXXXXXXXXXXRTIDPRALLWRQHH---PEGIACNRCPSCLSFAVITKLQKIANHPSLLQND--DSVSPRSSSSLSSTCLPHPFSSSAEATRAFAELAFGPKYLAEMGGTDRPTNLRFLLNAIPKQSGKLRDLDRLL-KTFSPSEKVLIFSLSVQMLRLLQVFATIQGYSFLSLDGSTPGGERQGTIDKFINDKSITLFFISTKAGGLGLNLTCASKVVIFDVNWNPSHDLQAMDRSYRLGQSRDVQVYRFVAQGTIEEVCYMRQIYKQQLNSLALERVTVRRPSSPVAGMGKKKGGRTDSVKFDSVQGIKGEEGELFGVENLLR-LQKEPFILD 884
            GP +PL+L  E      G    V+VP      L  +Q EGV++LY  YK K G ILGD MGLGKTIQ +  + A+    G +   +  R +  +       E K + VLV+CP+SVI+ W + F  WG F +    G+  + E ++   R   +D+V+ S++   +HGS     L++I W  V+ DE H++KN+++Q+ +A  +++   + GLTGT +QN   +L+ +    AP   GT   F   Y  PI +G K  AS  ++  +   R  L ++L    L+R     I   LKGK + V+FC ++P+Q  +Y+R+L  P+FQ L+ + E C CG  + +  KCC R                               P+  +W   H   P+G  C  CP CL    + KLQ+++NH  LL+ +  D +  R+  +                  AFA L FG      +GG     +  FL  +  +  GK+  L  LL K  S  +KVL+FS SV+ML +L+ F   +GY F  LDGSTP   RQG +D+F    S  +F IST+AGGLGLNL  A++VV+FD NWNP+ DLQA DRS+R GQ R V V+R +A G++EE+ Y RQIYKQQL +LA+                    G  +   F+ VQ  KG++GELFG+ NL R LQ + F  D
Sbjct:   94 GPYEPLLLSDE------GSPERVEVPAPINSRLLEHQREGVRFLYNLYKQKIGGILGDDMGLGKTIQSIAFIAAILHNDG-ELFRLPFRSKANL------SEAKKKVVLVLCPTSVIENWQREFEAWGSFPLGVYHGA--QREAIVDKVRRDELDVVITSHDTFRIHGSS----LQEIDWDCVIVDEAHRLKNEKSQLYKACCRLRTKCRFGLTGTILQNKLIDLFNVFEWAAPGCLGTREHFRGYYDEPIKQGQKISASQVLVELAEKRRQHLLAVLRRYSLRRTKDETIGHLLKGKEDIVIFCAMSPIQRRVYKRLLESPDFQCLVRKNEPCGCGSEEPS-SKCCLRTA-----------------------------PKGPIWSYLHKGNPDG--CESCPCCLVLPCLNKLQQVSNHLELLKPNLSDDIEKRTKDA------------------AFASLVFGDD-APSLGGIQPDES--FLGLSDSQNCGKMLALKNLLSKWTSQGDKVLLFSYSVRMLGILEKFLIRRGYCFCRLDGSTPMNARQGIVDEFNTSPSKQVFLISTRAGGLGLNLVSANRVVVFDPNWNPAQDLQAQDRSFRFGQKRHVTVFRLLAAGSLEELIYTRQIYKQQLFNLAVT-------------------GNREKRYFEGVQDSKGDKGELFGLSNLFRDLQDKVFTSD 702          
BLAST of NO29G00860 vs. NCBI_GenBank
Match: XP_008619242.1 (hypothetical protein SDRG_14862 [Saprolegnia diclina VS20] >EQC27338.1 hypothetical protein SDRG_14862 [Saprolegnia diclina VS20])

HSP 1 Score: 384.8 bits (987), Expect = 8.800e-103
Identity = 263/790 (33.29%), Postives = 399/790 (50.51%), Query Frame = 0
Query:  100 VADNAAVKRDTRSQYMLSLSSFSSSEPKSKMSGDPRNQNQKRKR-----ALQSSVPASSSSFSSIAQRWPRIIGEAEKSEDENHDGEELYPIFDNPMCLGPEKPLVLGYEEQEGGDGRQRAVQVPMAAARYLFGYQEEGVKWLYGHYKAKAGCILGDTMGLGKTIQVVCLMLAVFGKKGLQSD--AVELRERQQMLRRGAREEVKG--QAVLVVCPSSVIDQWLKAFAVWGKFAVSDLRGSKEETEGVLSDTRIGAIDIVVCSYEGMHGSKCGFRLKQIHWRMVVFDEFHKVKNKETQVAQAAGKIKAHVKIGLTGTPVQNAYNELWALLSIVAPHLAGTSADFYNTYTIPINRGNKRGASSEVISKSNAARVSLESLLSHVLLKRHGSMIADQLK-GKSEYVVFCKLTPMQYAIYERVLALPEFQMLLHRKELCDCGRRDATRGKCCYRVPLVPTHPQXXXXXXXXXXXXXXXXXXRTIDPRALLWRQHHPEGIACNRCPSCLSFAVITKLQKIANHPSLLQNDDSVSPRSSSSLSSTCLPHPFSSSAEATRAFAELAFGPKYLAEMGGTDRPTNLRFLLNAIPKQSGKLRDLDRLLKTF-SPSEKVLIFSLSVQMLRLLQVFATIQGYSFLSLDGSTPGGERQGTIDKFINDKSITLFFISTKAGGLGLNLTCASKVVIFDVNWNPSHDLQAMDRSYRLGQSRDVQVYRFVAQGTIEEVCYMRQIYKQQLNSLALERVTVRRPSSPVAGMGKKKGGRTDSVKFDSVQGIKGEEGELFGVENLLRLQKE 879
            ++D A V  DT        ++ S+S+   K    P +     KR      ++ +V A+          WPR +   E + DE                     PLVL        +   R VQVP    R+L  YQ EGV W++       G ILGD MGLGKTIQV+ L+ A+  K G  SD  A   R R    R     ++ G    +L+V P+S++  W     +W       L G ++E E +L+    G  +IV+CSY+ +  +    +++ + W ++V DE H +KN E+Q  +A   +    ++GLTGT +QN  +EL  LL+ +     G+ ++F + Y   I    K+ A+ E + ++ A    L   L    L+R  S+  D  +  K + +VFC+LTP+Q A+Y+RV+A P+F++L+   + CDCG R+ TR +CCY                                   +LW++HHP+  AC  CP+C+ F  I +L K++NH  LL+    V+ R    + +            AT+AFA +AFG   L ++G          +  A+    GK+  L++LL  +    EKVL+FS SV+ML +LQ F   +  +++ LDGST   ER   + +F  D ++++F ISTKAGGLGLN+T A+ VVIFD +WNP+HD QA DR+YR+GQ+RDV+V+R +  GTIEE+ Y RQIYKQQL    L+                   G+     F+++ G+KG+ GELFG+ NLL+ + E
Sbjct:  232 LSDAAPVAPDTSRPRAKPATTASASDVAPKRKSQPLSTASAPKRRQSSTGVKDTVNANXXXXXXXXSTWPR-LSPPEGAIDE---------------------PLVL---LDAPNEVYSRRVQVPSRLNRFLQPYQREGVAWMFQAVVENRGAILGDEMGLGKTIQVIGLLSALLFKDGTSSDKEAYRTRLRSASRREPVEFDLNGIPPPILIVVPASLLMNWELELKLWMCCRPVILNGKRQEREAILASLSRGTHEIVICSYDILKANLA--QIQAVPWYLIVLDEMHCLKNPESQATKAVQALSCKRRLGLTGTLMQNDTDELHCLLNTIHEGSLGSVSEFRSYYADDIKFARKKSAAPEAVERARAKEKQLRDCLVPYYLRRDKSIHPDFTRIQKFDKIVFCELTPLQRAVYDRVIASPDFKVLITGDDPCDCG-RNKTRRRCCY-------------------------------VSGGVLWQKHHPDDEACQACPACIQFPCIAQLLKLSNHLDLLR----VNARDPDDVQA------------ATKAFATVAFGTD-LDKIGLYQAQGLFEKMNTAL---CGKMVVLEKLLSIWMRKHEKVLLFSRSVRMLDILQAFLISKACAYVRLDGSTKVDERLQLVQRFNRDPTLSVFLISTKAGGLGLNITSATNVVIFDPSWNPAHDCQAQDRAYRIGQTRDVKVFRLITLGTIEEMIYARQIYKQQLTDTTLK-------------------GKMGPRYFEAIIGVKGQHGELFGIRNLLQFKPE 923          
BLAST of NO29G00860 vs. NCBI_GenBank
Match: XP_024584282.1 (dna repair and recombination protein rad26 [Plasmopara halstedii] >CEG47913.1 dna repair and recombination protein rad26 [Plasmopara halstedii])

HSP 1 Score: 384.8 bits (987), Expect = 8.800e-103
Identity = 251/713 (35.20%), Postives = 362/713 (50.77%), Query Frame = 0
Query:  182 ELYPIFDNPMCLGPEKPLVLGYEEQEGGDGRQRAVQVPMAAARYLFGYQEEGVKWLYGHYKAKAGCILGDTMGLGKTIQVVCLMLAVFGKKGLQSD-----AVELRERQQMLRRGA--REEVKG-------QAVLVVCPSSVIDQWLKAFAVWGKFAVSDLRGSKEETEGVLSDTRIGAIDIVVCSYEGM--HGSKCGFRLKQIHWRMVVFDEFHKVKNKETQVAQAAGKIKAHVKIGLTGTPVQNAYNELWALLSIVAPHLAGTSADFYNTYTIPINRGNKRGASSEVISKSNAARVSLESLLSHVLLKRH-GSMIADQLKGKSEYVVFCKLTPMQYAIYERVLALPEFQMLLHRKELCDCGRRDATRGK-CCYRVPL-VPTHPQXXXXXXXXXXXXXXXXXXRTIDPRALLWRQHHPEGIACNRCPSCLSFAVITKLQKIANHPSLLQNDDSVSPRSSSSLSSTCLPHPFSSSAEATRAFAELAFGPKYLAEMGGTDRPTNLRFLLNAIPKQSGKLRDLDRLLKTFSP-SEKVLIFSLSVQMLRLLQVFATIQGYSFLSLDGSTPGGERQGTIDKFINDKSIT-LFFISTKAGGLGLNLTCASKVVIFDVNWNPSHDLQAMDRSYRLGQSRDVQVYRFVAQGTIEEVCYMRQIYKQQLNSLALERVTVRRPSSPVAGMGKKKGGRTDSVKFDSVQGIKGEEGELFGVENLL 874
            E +P  D P       PLVL   E  G     R  +V  +   YL  YQ +GV++L+  Y    G ILGD MGLGKTIQ++  + A+ GK+G   D      + L+ R++    GA    E  G         + +V P+S++  W +    W       LRG   + + ++     G  +IV+CSY+ +  H S    RL +I W +V+ DE H +KN E+++ +A   I+   K+GLTGT +QN   EL  L+  +AP   GT A+F   Y   I  G K+ A+ E + +S    + L   LS   L+R  G     Q+  K + VVFC LT MQ A Y+RVLA+PEFQ+L    E CDC R    + K CCY+ P  +   P                          LL+ + H +G  C  CP+C+    +  L K++NH  LL+ +                PH           FA+ AFG   L E+GG ++ +N + + +   K  GK+  L++LL  +    EK LIFS S +ML ++Q+F   +   +  LDG+T   ER   +++F +D S T +F IST+AGG+GLNL  A+ VVIFD +WNP+HD QA DR+YR+GQ++DVQVYR +  GTIEE+ Y+RQIYKQQL+   L+     R                    F+ VQG   ++GELFG+ NL+
Sbjct:  316 ERWPQLDPPKI--QAGPLVLSSSEHHG----SRTFEVCASLNSYLLDYQRQGVEFLFKAYNCNTGAILGDDMGLGKTIQIIAFLSAIMGKQGDYRDKETWQKILLQRRKRFSDSGAVGHPEDSGFCFSDEISPIFIVMPASLLQNWEQELHTWMSCTTVILRGKPIDRDAIIDQIARGEFEIVICSYDILKTHSS----RLNKISWEVVILDEMHCLKNPESKLTKAVKGIRCRKKLGLTGTLMQNNEKELHCLVDTIAPGAIGTWAEFSLYYGQDIKYGRKKSAAPEAVKRSRQKEIELRRKLSPYYLRREKGINPTFQVVKKCDQVVFCDLTQMQMAAYQRVLAMPEFQLLQRGDERCDCNRDSMEKRKSCCYKTPADLGERP-------------------------GLLYERFHEQG-PCKNCPNCMGLPCVAMLLKLSNHLELLKVN----------------PHDGPEVQHYQEEFAKTAFGSD-LEEVGGVNQVSNFKEMCSISTKTCGKMIVLEKLLAVWKKRREKTLIFSRSTRMLDIIQLFLITKATRYSRLDGNTKVEERLKMVNEFNSDDSHTAVFLISTRAGGVGLNLQSATNVVIFDPSWNPAHDCQAQDRAYRIGQTKDVQVYRLITLGTIEEMIYVRQIYKQQLSDSTLKGFNAPR-------------------YFEGVQGNPQQQGELFGIANLI 956          
BLAST of NO29G00860 vs. NCBI_GenBank
Match: EFJ05584.1 (hypothetical protein SELMODRAFT_40953, partial [Selaginella moellendorffii])

HSP 1 Score: 382.9 bits (982), Expect = 3.300e-102
Identity = 252/701 (35.95%), Postives = 362/701 (51.64%), Query Frame = 0
Query:  194 GPEKPLVLGYEEQEGGDGRQRAVQVPMAAARYLFGYQEEGVKWLYGHYKAKAGCILGDTMGLGKTIQVVCLMLAVFGKKGLQSDAVELRERQQMLRRGAREEVKGQAVLVVCPSSVIDQWLKAFAVWGKFAVSDLRGSKEETEGVLSDTRIGAIDIVVCSYE--GMHGSKCGFRLKQIHWRMVVFDEFHKVKNKETQVAQAAGKIKAHVKIGLTGTPVQNAYNELWALLSIVAPHLAGTSADFYNTYTIPINRGNKRGASSEVISKSNAARVSLESLLSHVLLKR-HGSMIADQLKGKSEYVVFCKLTPMQYAIYERVLALPEFQMLLHRKELCDCGRRDATRGKCCYRVPLVPTHPQXXXXXXXXXXXXXXXXXXRTIDPRALLWRQHH---PEGIACNRCPSCLSFAVITKLQKIANHPSLLQND--DSVSPRSSSSLSSTCLPHPFSSSAEATRAFAELAFGPKYLAEMGGTDRPTNLRFLLNAIPKQSGKLRDLDRLL-KTFSPSEKVLIFSLSVQMLRLLQVFATIQGYSFLSLDGSTPGGERQGTIDKFINDKS-ITLFFISTKAGGLGLNLTCASKVVIFDVNWNPSHDLQAMDRSYRLGQSRDVQVYRFVAQGTIEEVCYMRQIYKQQLNSLALERVTVRRPSSPVAGMGKKKGGRTDSVKFDSVQGIKGEEGELFGVENLLR-LQKEPFILD 884
            GP +PLVL  EE          V+VP      L  +Q EGV++LY  YK K G ILGD MGLGKTIQ +  + A+    G +   +  R +  +       E K + VLV+CP+SVI+ W + F  WG F +    G+  + E ++   R   +D+V+ S++   +HGS     L++I W  V+ DE H++KN+++Q+ +A  +++   + GLTGT +QN   +L+ +    AP   GT   F   Y  PI +G K  AS  ++  +   R  L ++L    L+R     I   LKGK + V+FC ++P+Q  +Y+R+L  P+FQ L+ + E C CG  + +  KCC R                               P+  +W   H   P+G  C  CP CL    + KLQ+++NH  LL+ +  D +  R   +                  AFA L FG      +GG     +  FL  +  +  GK+  L  LL K  S  +KVL+FS SV+ML +L+ F   +GY F  LDGSTP   RQG +D+F    S   +F IST+AGGLGLNL  A++VV+FD NWNP+ DLQA DRS+R GQ R V V+R +A G++EE+ Y RQIYKQQL +LA+                    G  +   F+ VQ  KG++GELFG+ NL R LQ + F  D
Sbjct:    1 GPYEPLVLSDEES------PERVEVPAPINSRLLEHQREGVRFLYNLYKQKIGGILGDDMGLGKTIQSIAFIAAILHNDG-ELFRLPFRSKANL------SEAKKKVVLVLCPTSVIENWQREFEAWGSFPLGVYHGA--QREAIVDKVRRDELDVVITSHDTFRIHGSS----LQEIDWDCVIVDEAHRLKNEKSQLYKACCRLRTKCRFGLTGTILQNKLIDLFNVFEWAAPGCLGTREHFRGYYDEPIKQGQKISASQVLVELAEKRRQHLLAVLRRYSLRRTKDETIGHLLKGKEDIVIFCAMSPIQRRVYKRLLESPDFQCLVRKNEPCGCGSEEPS-SKCCLRTA-----------------------------PKGPIWSYLHKGNPDG--CESCPCCLVLPCLNKLQQVSNHLELLKPNLSDDIEKRRKDA------------------AFASLVFGDD-APSLGGIQPDES--FLGLSDSQNCGKMLALKNLLSKWTSQGDKVLLFSYSVRMLGILEKFLIRRGYCFCRLDGSTPMNARQGIVDEFNTSPSKQVVFLISTRAGGLGLNLVSANRVVVFDPNWNPAQDLQAQDRSFRFGQKRHVTVFRLLAAGSLEELIYTRQIYKQQLFNLAVT-------------------GNREKRYFEGVQDSKGDKGELFGLSNLFRDLQDKVFTSD 610          
BLAST of NO29G00860 vs. NCBI_GenBank
Match: XP_020237608.1 (switch 2 [Cajanus cajan])

HSP 1 Score: 381.7 bits (979), Expect = 7.400e-102
Identity = 247/688 (35.90%), Postives = 360/688 (52.33%), Query Frame = 0
Query:  194 GPEKPLVLGYEEQEGGDGRQRAVQVPMAAARYLFGYQEEGVKWLYGHYKAKAGCILGDTMGLGKTIQVVCLMLAVFGKKGLQSDAVELRERQQMLRRGAREEVKGQAVLVVCPSSVIDQWLKAFAVWGKFAVSDLRGSKEETEGVLSDTRIGAIDIVVCSYE--GMHGSKCGFRLKQIHWRMVVFDEFHKVKNKETQVAQAAGKIKAHVKIGLTGTPVQNAYNELWALLSIVAPHLAGTSADFYNTYTIPINRGNKRGASSEVISKSNAARVSLESLLSHVLLKR-HGSMIADQLKGKSEYVVFCKLTPMQYAIYERVLALPEFQMLLHRKELCDCGRRDATRGKCCYRVPLVPTHPQXXXXXXXXXXXXXXXXXXRTIDPRALLWRQHH---PEGIACNRCPSCLSFAVITKLQKIANHPSLLQNDDSVSPRSSSSLSSTCLPHPFSSSAEATRAFAELAFGPKYLAEMGGTDRPTNLRFLLNAIPKQSGKLRDLDRLL-KTFSPSEKVLIFSLSVQMLRLLQVFATIQGYSFLSLDGSTPGGERQGTIDKFINDKSITLFFISTKAGGLGLNLTCASKVVIFDVNWNPSHDLQAMDRSYRLGQSRDVQVYRFVAQGTIEEVCYMRQIYKQQLNSLALERVTVRRPSSPVAGMGKKKGGRTDSVKFDSVQGIKGEEGELFGVENLLR 875
            GP +PL+L         G+   VQVP +    L  +Q EGVK+LYG YK   G ILGD MGLGKTIQ +  + A+FGK+G  +    L+E           EVK +  L++CP+SVI  W   F+ W  F+VS   G+  +   +    R   ++I++ S++   +HGS     L  ++W++V+ DE H++KN+++++ +A  +IK   + GLTGT +QN   EL+ L   VAP   GT   F   Y  P+ +G +  A    +  +N  +  L ++L   +L+R     I   + GK + +VFC ++ +Q  +Y R+L LP+ Q L+++   C CG    T+ +CC R                             I P  ++W   H   P+G  C+ CP CL    + KLQ+I+NH  L++ +    P               S  AE    FA   FGP      G T    N  F+  +  K  GK+R L++LL   FS  +KVL+FS SV+ML +L+ F   +GY F  LDGSTP   RQ  +D F +  S  +F IST+AGGLGLNL  A++VVIFD NWNP+ DLQA DRS+R GQ R V V+R +A G++EE+ Y RQ+YKQQL+++A+                    G+ +   F+ VQ  K  +GELFG+ NL R
Sbjct:  115 GPFEPLLL------SSQGQLPVVQVPASINCRLLEHQREGVKFLYGLYKNNHGGILGDDMGLGKTIQAIAFLAAIFGKEGHST----LKENW---------EVKREPALIICPTSVIHNWESEFSKWSNFSVSIYHGANRDL--IHDKLRANGVEILITSFDTYRIHGSS----LSDVNWKIVIIDEAHRLKNEKSKLYKACLEIKTLRRYGLTGTIMQNKIMELFNLFDWVAPGSLGTREHFREFYDEPLKQGQRSTAPDRFVQIANKRKQHLVTVLHKYMLRRTKEETIGHLMMGKEDNIVFCAMSDVQKRVYRRMLQLPDIQCLINKNLPCSCG-SPLTQVECCKR-----------------------------IVPDGVIWPYLHRDNPDG--CDSCPFCLVLPCLVKLQQISNHLELIKPNPKDDPDKQ------------SKDAE----FAAAVFGPDIDLVGGNTQ---NESFMGLSDVKHCGKMRALEKLLFSWFSQGDKVLLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKQVFVISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRYGQKRHVVVFRLLAAGSLEELVYTRQVYKQQLSNIAV-------------------SGKMEKRYFEGVQDCKEFQGELFGISNLFR 707          
BLAST of NO29G00860 vs. NCBI_GenBank
Match: XP_017570265.1 (PREDICTED: DNA excision repair protein ERCC-6-like 2 [Pygocentrus nattereri])

HSP 1 Score: 381.3 bits (978), Expect = 9.700e-102
Identity = 242/716 (33.80%), Postives = 352/716 (49.16%), Query Frame = 0
Query:  181 EELYPIFD-NPMCLGPEKPLVLGYEEQEGGDGRQRAVQVPMAAARYLFGYQEEGVKWLYGHYKAKAGCILGDTMGLGKTIQVVCLMLAVFGKKGLQSDAVELRERQQMLRRGAREEVKGQAVLVVCPSSVIDQWLKAFAVWGKFAVSDLRGSKEETEGVLSDTRIGAIDIVVCSYEGMHGSKCGFRLKQIHWRMVVFDEFHKVKNKETQVAQAAGKIKAHVKIGLTGTPVQNAYNELWALLSIVAPHLAGTSADFYNTYTIPINRGNKRGASSEVISKSNAARVSLESLLSHVLLKRHGSMIADQLKGKSEYVVFCKLTPMQYAIYERVLALPEFQMLLHRKELCDCGRRDATRGKCCYRVPLVPTHPQXXXXXXXXXXXXXXXXXXRTIDPRALLWRQHHPEGIACNRCPSCLSFAVITKLQKIANHPSLLQNDDSVSPRSSSSLSSTCLPHPFSSSAEATRAFAELAFGPKYLAEMGGTDRPTNLRFLLNAIPKQSGKLRDLDRLLKTF-SPSEKVLIFSLSVQMLRLLQVFATIQGYSFLSLDGSTPGGERQGTIDKFINDKSITLFFISTKAGGLGLNLTCASKVVIFDVNWNPSHDLQAMDRSYRLGQSRDVQVYRFVAQGTIEEVCYMRQIYKQQLNSLALERVTVRRPSSPVAGMGKKKGGRTDSVKFDSVQGIKGEEGELFGVENLLRLQKEPFILDARKKFRAEEGR 895
            E+  P+F  N    GP KP VL           +   QVP    RYL  YQ EG+K++Y  Y    GCILGD MGLGKTIQ +  + AV  K G   D    R      +  +++    +  L+V P SV+  W      WG F    + G K+E E  L+    G  +I + +YE +    C  +   I W  V+ DE HK+KN ++Q+ QA  ++K  V++GLTGT +QN   ELW ++    P   G+   F N ++ PI +G K   +   +++   A  +L   LSH  L+R  ++I+DQL  K + VV+C LT  Q A+Y  VL   +  +LL   E C CG    +R KCC++                                       ++ +G+        L F+ +  L+K+ANH +LLQ  D  S +    +++ C         +  + F +             T+R     F   + P  SGK++ L RLL  F    +KVL+FSLS ++L +L+ +   +G  +  LDG+T   ER   + +F + K I L  +ST AGGLGLN   A+ VV+FD  WNP++DLQA+DR+YR+GQ +DV V+R ++ GT+EE+ Y+RQIYKQQL S  + R   RR                    F++VQG  G+ GELFG+ NL RLQ +   L  R   R  EGR
Sbjct:    7 EDEKPLFHANQRSSGPSKPFVLS----------EHGHQVPYTINRYLRNYQREGIKFIYDRYMKSRGCILGDDMGLGKTIQAISFLAAVLQKTGTWEDVQNNRPEFLQSQGSSKQSKIKKVFLIVAPLSVLYNWKDELDTWGHFKTVIVHGVKKEEE--LARVSRGRCEIALTTYETLR--LCLDQFNSIDWAAVIVDEAHKLKNYKSQITQAMKELKCKVRVGLTGTILQNNLEELWCVMDWAVPGCLGSLGRFKNKFSDPIEQGQKHSVTKRALAEGRKAVQTLAKRLSHWFLRRTKALISDQLPKKDDRVVYCSLTDFQQAVYRAVLDTDDVTLLLRSSEKCHCG-SGRSRRKCCHK---------------------------------------YNSDGVPVRH----LYFSYLAILRKVANHVALLQTKDGTSKKQEKYVAAVC--------EQVFKKFPDF------------TERCKQAAFEAMSDPLYSGKMKVLQRLLNHFIKKKDKVLLFSLSTKLLDVLESYCMAEGLEYRRLDGTTKSKERVHIVKEFNSSKDINLCLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCKDVTVFRLISLGTVEEIIYLRQIYKQQLQSSVIGRENARR-------------------YFEAVQGADGQAGELFGIRNLFRLQTDGTCLTHRVLER--EGR 623          
The following BLAST results are available for this feature:
BLAST of NO29G00860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ28871.11.500e-11837.61conserved unknown protein [Ectocarpus siliculosus][more]
CBJ49262.12.000e-11837.39conserved unknown protein [Ectocarpus siliculosus][more]
OQR94152.16.500e-10637.65DNA repair and recombination protein RAD26 [Achlya... [more]
XP_024522854.11.800e-10336.00switch 2 [Selaginella moellendorffii][more]
XP_002972978.12.300e-10335.86switch 2 [Selaginella moellendorffii] >EFJ26199.1 ... [more]
XP_008619242.18.800e-10333.29hypothetical protein SDRG_14862 [Saprolegnia dicli... [more]
XP_024584282.18.800e-10335.20dna repair and recombination protein rad26 [Plasmo... [more]
EFJ05584.13.300e-10235.95hypothetical protein SELMODRAFT_40953, partial [Se... [more]
XP_020237608.17.400e-10235.90switch 2 [Cajanus cajan][more]
XP_017570265.19.700e-10233.80PREDICTED: DNA excision repair protein ERCC-6-like... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL061nonsL061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005205NSK005205Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G00860.1NO29G00860.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|568336gene_8258Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G00860.1NO29G00860.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G00860 ID=NO29G00860|Name=NO29G00860|organism=Nannochloropsis oceanica|type=gene|length=3836bp
ATGAAGAAGAAAAAGAAAGTGCCGGCTCCATCATCAGCGCTCATATCTCT
GGACTCGGACGCCTCTACCACGGATGGTGAAGGGAACGAGGACCATGGCA
AGCACCTGATGGTGAAGAAGAAGGCTATTAAGACAGTAAAGCAGAGCACG
AGCAAGAGTAAGGGAAAGCGGAGTGAATTCGACGACGAGAGTGACGAAGA
AGAAAGCGACCGCGGCAACGTTTCGTCCTTCTCCCCTTTCTCCGCCAGCT
CGGACTCCGAGACAGACGCTGGACTATACCCGTGTGCTTCTGCTGATGTT
GCGGATAATGCTGCGGTGAAAAGAGACACGAGAAGCCAGTATATGCTTTC
TCTCTCTTCTTTTTCTTCCTCTGAGCCTAAGAGCAAGATGAGCGGTGATC
CAAGAAATCAGAATCAAAAGCGGAAACGGGCCCTCCAAAGCAGTGTCCCT
GCCTCTTCCTCCTCCTTTTCTTCCATCGCTCAACGATGGCCACGGATAAT
TGGAGAAGCGGAGAAGAGCGAGGATGAAAACCACGACGGTGAGGAACTTT
ACCCCATCTTTGACAATCCCATGTGTTTAGGGCCAGAAAAGCCGTTGGTG
CTGGGTTACGAGGAGCAGGAAGGGGGCGATGGAAGGCAGCGGGCTGTCCA
GGTGCCCATGGCGGCGGCGCGTTATTTGTTTGGTTATCAAGAGGAAGGGG
TGAAGTGGCTCTATGGCCATTACAAGGCAAAGGCAGGCTGTATCTTGGGG
GATACCATGGGCTTGGGTAAAACAATCCAGGTTGTCTGTTTGATGCTTGC
TGTGTTTGGGAAGAAAGGATTACAAAGCGATGCCGTCGAGTTACGGGAGC
GGCAACAAATGTTGAGGAGGGGGGCGAGGGAGGAGGTGAAGGGTCAAGCA
GTTTTGGTGGTTTGTCCAAGCAGCGTGATAGACCAGTGGTTGAAGGCGTT
TGCGGTTTGGGGGAAATTCGCGGTGAGCGACCTAAGGGGGAGCAAGGAGG
AGACAGAGGGCGTGTTGTCGGATACGCGGATTGGTGCAATAGACATAGTA
GTGTGTTCGTATGAGGGGATGCATGGGTCAAAGTGTGGGTTTAGACTGAA
ACAGATTCATTGGCGAATGGTGGTGTTCGACGAGTTCCACAAAGTGAAAA
ATAAGGAGACTCAGGTGGCGCAGGCGGCGGGAAAGATAAAAGCGCACGTA
AAGATTGGCTTAACAGGGACGCCCGTTCAAAATGCTTACAgtaagttcgg
gggagggagggaaggaggtaaggaaggttttgaaagagagagagagagag
agagagagagagagagagagagagagagagagagagagagagagagagaa
agaaggagagagagacgcgctcgtcatatatacgcacgtacacagctctg
acacacagcgtacaaacgcaaacagacgtactgacaagatacatacagcc
acatgccacgtgcatacaggatcccgtgaaagctaagccatgcagccacg
cgaatacacaaacattacaacatatgcatacaatctcacactcacgcttc
cccgacatctccttcccttgacccatccaaaacagACGAGCTCTGGGCCC
TCCTCTCCATTGTGGCTCCCCATCTCGCCGGCACGAGCGCTGATTTTTAC
AATACCTACACCATACCAATCAATCGGGGCAACAAACGCGGCGCCTCCTC
TGAAGTCATCAGCAAGTCCAACGCTGCCCGCGTCAGCCTCGAGTCCCTCC
TCTCCCATGTTCTTCTGAAGCGCCACGGGTCGATGATTGCAGACCAACTG
AAAGGGAAATCCGAATATGTGGTTTTTTGCAAGCTCACCCCTATGCAATA
CGCGATCTACGAACGTGTTCTAGCTTTGCCTGAATTTCAAATGCTACTGC
ACCGGAAGGAGCTCTGCGACTGCGGTCGTCGCGACGCGACCAGAGGGAAA
TGCTGCTACCGCGTGCCCCTTGTACCCACCCACCCTCAATCCTCCTCCTC
CTCCTCCTCTTCTACTACTTGTGCTGGCATTATCTCTTCTCGTCGAACTA
TAGACCCCCGAGCCCTCCTCTGGCGCCAGCACCACCCTGAAGGTATCGCC
TGCAACCGGTGCCCTTCCTGTCTCAGTTTCGCGGTCATCACCAAACTCCA
AAAAATCGCCAATCACCCCTCCCTCTTGCAAAACGATGATTCTGTTTCCC
CGCGCTCCTCCTCCTCCCTCTCCTCTACCTGTCTCCCTCACCCATTTTCC
TCCTCCGCCGAGGCAACACGGGCTTTCGCTGAACTCGCCTTCGGTCCTAA
ATATCTTGCAGAAATGGGCGGTACCGACCGCCCAACTAACCTCCGCTTTC
TCCTAAACGCCATTCCTAAGCAGTCCGGGAAACTCCGAGATCTTGACAGG
CTTTTGAAAACTTTTTCCCCGAGTGAGAAAGTCCTCATATTTTCCCTATC
CGTTCAGATGCTTCGCTTGCTTCAGGTGTTCGCAACTATCCAGGGATACT
CTTTCTTGTCACTGGATGGGTCGACTCCTGGAGGGGAACGCCAAGGGACT
ATTGATAAATTTATCAACGATAAAAGTATTACCTTGTTTTTTATTTCGAC
CAAGGCAGGGGGCCTGGGGCTGAATCTGACATGTGCGAGTAAGGTTGTCA
TTTTTGATGTAAATTGGAACCCGTCGCATGATTTGCAGgtataattcgat
tgatatataagtagcggtttctgggcctttgtatggagttgattgtgcgc
tcacgcgtgagtgattccgcacgcagttgtgtgcattccgtgttcaagcg
cgctcgtttccatacctgtatatgaatgttttccacgcctccgcttgtgt
gcacgcctacattttcgtatgtcaatgtatacataccctgcgtgctctgc
tcacccatcctcttcactggtcaaattcaaattaagcagGCCATGGACCG
TTCCTACCGCCTGGGGCAATCACGAGATGTGCAAGTGTATCGCTTCGTCG
CCCAGGGTACCATCGAAGAAGTCTGCTACATGCGGCAAATTTATAAGCAG
CAACTCAACAGCCTGGCCCTCGAACGCGTCACTGTCCGACGGCCTTCTTC
TCCTGTGGCGGGCATGGGGAAAAAGAAGGGGGGAAGGACGGACAGCGTGA
AGTTTGACTCGGTGCAGGGAATCAAGGGGGAAGAAGGGGAGCTTTTTGGT
GTTGAGAATCTCTTGAGACTACAGAAAGAACCGTTCATCTTAGATGCGAG
AAAAAAATTTCGGGCGGAGGAAGGAAGGCAGAAGGACGACATAGAAAAGG
AAGAAAACGGAGAAGAGGAGGAGGATAAGGGAGAGAAGGATTTGAATGTA
ACGAGCACGGAGGTATTGGAAAGCCAATTGCGGGACGTGGTGGAGATAGC
AGCGGCGGGGAGGCACAGGAAAGGAGGGTTGAAAGGGGAGAAGGGAAACG
TGGACGTGGAATGCACGGCGGCGGATATTTGGGGATTGTTGGGGGTAGAG
GTACCGGAGAAGGAGGAGGGAGAGGAAAAAGAGGGGGAAGAAGTGGATGA
GGTTGAGGAATTTGACGACGACGAAGGGGAGGATGAGGCAGGGGGATTGG
AAGCAGAACATATGCGGCAGCGAAAGAAGGAGAAGAGAAGAGAAACACAG
CATAAGAATCAGGAGGTAGAAGAAGATTCGGAGGAGGAGGAGGTAGAGGA
TGAGGAGGAGAAAGGAGAAAGAGAAGAAGAAAAGGAAGGTCTGCCGACGC
CAGATAAGCCTTTGTCTGCAAAGCTGAGCTTGTACATACCCGCTTACGTG
CAGGAAAAAAAAGAGGGAGAGAAAGTGAGGGAGTGA
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protein sequence of NO29G00860.1

>NO29G00860.1-protein ID=NO29G00860.1-protein|Name=NO29G00860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1080bp
MKKKKKVPAPSSALISLDSDASTTDGEGNEDHGKHLMVKKKAIKTVKQST
SKSKGKRSEFDDESDEEESDRGNVSSFSPFSASSDSETDAGLYPCASADV
ADNAAVKRDTRSQYMLSLSSFSSSEPKSKMSGDPRNQNQKRKRALQSSVP
ASSSSFSSIAQRWPRIIGEAEKSEDENHDGEELYPIFDNPMCLGPEKPLV
LGYEEQEGGDGRQRAVQVPMAAARYLFGYQEEGVKWLYGHYKAKAGCILG
DTMGLGKTIQVVCLMLAVFGKKGLQSDAVELRERQQMLRRGAREEVKGQA
VLVVCPSSVIDQWLKAFAVWGKFAVSDLRGSKEETEGVLSDTRIGAIDIV
VCSYEGMHGSKCGFRLKQIHWRMVVFDEFHKVKNKETQVAQAAGKIKAHV
KIGLTGTPVQNAYNELWALLSIVAPHLAGTSADFYNTYTIPINRGNKRGA
SSEVISKSNAARVSLESLLSHVLLKRHGSMIADQLKGKSEYVVFCKLTPM
QYAIYERVLALPEFQMLLHRKELCDCGRRDATRGKCCYRVPLVPTHPQSS
SSSSSSTTCAGIISSRRTIDPRALLWRQHHPEGIACNRCPSCLSFAVITK
LQKIANHPSLLQNDDSVSPRSSSSLSSTCLPHPFSSSAEATRAFAELAFG
PKYLAEMGGTDRPTNLRFLLNAIPKQSGKLRDLDRLLKTFSPSEKVLIFS
LSVQMLRLLQVFATIQGYSFLSLDGSTPGGERQGTIDKFINDKSITLFFI
STKAGGLGLNLTCASKVVIFDVNWNPSHDLQAMDRSYRLGQSRDVQVYRF
VAQGTIEEVCYMRQIYKQQLNSLALERVTVRRPSSPVAGMGKKKGGRTDS
VKFDSVQGIKGEEGELFGVENLLRLQKEPFILDARKKFRAEEGRQKDDIE
KEENGEEEEDKGEKDLNVTSTEVLESQLRDVVEIAAAGRHRKGGLKGEKG
NVDVECTAADIWGLLGVEVPEKEEGEEKEGEEVDEVEEFDDDEGEDEAGG
LEAEHMRQRKKEKRRETQHKNQEVEEDSEEEEVEDEEEKGEREEEKEGLP
TPDKPLSAKLSLYIPAYVQEKKEGEKVRE*
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