NO29G00840, NO29G00840 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO29G00840 vs. NCBI_GenBank
Match: EWM21306.1 (hypothetical protein Naga_100350g5 [Nannochloropsis gaditana]) HSP 1 Score: 378.6 bits (971), Expect = 1.700e-101 Identity = 186/289 (64.36%), Postives = 208/289 (71.97%), Query Frame = 0 Query: 1 MGFFTDAIEDIVQEPWLIPSHPRREDFLYFRGSSKKSISTYRCVIASYWTFWVLLSILGSVGVPIPAPLFGVMDNDMDIKWLIFLTNWSMLLLGTYLWTAYAASRSLPPXXXXXXXXXXXHHRRRLYQTVWVLRNCTAVAALVVSLLFWTILFPEIKKTSWVDVHCHAINSVIVLLDLTVTHVPYYFKHGWMGLTYLVTYLLFSIVYWLSGGTDPEGDHYIYPPLNYKHPGEAAGLXXXXXXXXXPAVHTMLYVYNRWLR----RTEYWHGPQVGSRITVR-DRMPLLP 285 MG F + I DI +EPWLIP P REDFL+FRGSS +SIS YRC+IASYW+ W+L+SILGSVGVP+P LFG MDNDM KWLIFLTNWSM+LLGTYLWTA+AAS H RL QTVWVLRNCTAVAALVVSLLFW +LFP IKKTSW DVHCHA+NS +VLLDLT+THVPYYFKHGWM YLV YLLFS+VYW GGTDPEGD YIY PL+Y HPG A GL P VH LY Y R L + + G ++G R R DR+PLLP Sbjct: 1 MGIFNNIINDIAEEPWLIPESPEREDFLFFRGSSHRSISMYRCLIASYWSIWILISILGSVGVPLPDALFGSMDNDMGEKWLIFLTNWSMVLLGTYLWTAFAAS-------------LYTDHSPRLLQTVWVLRNCTAVAALVVSLLFWCVLFPAIKKTSWTDVHCHAVNSFLVLLDLTLTHVPYYFKHGWMPFLYLVLYLLFSVVYWAEGGTDPEGDPYIYEPLDYDHPGAATGLVLAVVFLVVPFVHVSLYAYTRCLSQGLCQACFGEGGKMGRREGARTDRLPLLP 276
BLAST of NO29G00840 vs. NCBI_GenBank
Match: EWM28341.1 (hypothetical protein Naga_100367g4 [Nannochloropsis gaditana]) HSP 1 Score: 102.8 bits (255), Expect = 1.800e-18 Identity = 73/253 (28.85%), Postives = 113/253 (44.66%), Query Frame = 0 Query: 14 EPWLIP--SHPRREDFLYFRGSSKKSIS------TYRCVIASYWTFWVLLSILGSVGVPIPAPLFGVMDNDMDIKWLIFLTNWSMLLLGTYLWTAYAASRSLPPXXXXXXXXXXXHHRRRLYQTVWVLRNCTAVAALVVSLLFWTILFPEIKKTSWVDVHCHAINSVIVLLDLTVTHVPYYFKHGWMGLTYLVTYLLFSIVYWLSGGTDPEGDHYIYPPLNYKHPGEAAGLXXXXXXXXXPAVHTMLYVYNRW 259 EPW P SH + S K +S TYR V YW+FWVL S LG G P W +++TNW+ ++G Y W A+ A L P L + W L + +++V L++W + FP + S + VH H +N++++++DL + PY+ KH ++ Y++F+ VYW + G + +Y PL+Y HP AA P VH + + RW Sbjct: 13 EPWGYPARSHFAVTHLKFPVASGKYGLSLYHIALTYRLVFLLYWSFWVLYSALGGDGPPTS-------------WWCVYVTNWTAAVMGGYAWGAFLA--ILIPRAFF------------LDRATWFLHDIATPLSIMVCLMYW-LAFP-VPPISGIIVHLHGVNALLMVMDLALARYPYHLKHFLPACGFMACYVVFNGVYWRAAG------NVVYTPLDYTHPFLAATALVGTFFIIFPIVHLLCW---RW 227
BLAST of NO29G00840 vs. NCBI_GenBank
Match: XP_001627037.1 (predicted protein [Nematostella vectensis] >EDO34937.1 predicted protein [Nematostella vectensis]) HSP 1 Score: 92.4 bits (228), Expect = 2.400e-15 Identity = 60/222 (27.03%), Postives = 103/222 (46.40%), Query Frame = 0 Query: 41 YRCVIASYWTFWVLLSILGSVGVPIPAPLFGVMDNDMDIKWLIFLTNWSMLLLGTY--------LWTAYAASRSLPPXXXXXXXXXXXHHRRRLYQTVWVLRNCTAVAALVVSLLFWTILFPEIKKTSWVDVHCHAINSVIVLLDLTVTHVPYYFKHGWMGLTYLVTYLLFSIVYWLSGGTDPEGDHYIYPPLNYK-HPGEAAGLXXXXXXXXXPAVHTMLY 254 +R ++A+Y T W++ S G + + KW I+LTNW LL Y LW ++ HH +W+L N A A+++S+++W + I +DV HA+N+V ++L+L ++ +P H L + + Y++F++VYW +GGT+ YIY ++YK PG A G+ P VH++ + Sbjct: 4 FRFLVAAYNTGWLIYS--------------GFHEANGKTKWFIYLTNWGYLLETVYFIYASAVTLWFHIREKKNKDQSDFNFSDLMRYHH-----SLMWILFNIAADTAVLISIIYWGWMVGPI---DGLDVSTHALNTVFMILELVLSKLPIRLLHCIYPLVFGLCYMIFTVVYWAAGGTNANNKPYIYSIVDYKDSPGMAVGILLGALLVLLPIVHSVFF 203
BLAST of NO29G00840 vs. NCBI_GenBank
Match: EAT43152.1 (AAEL005379-PA [Aedes aegypti]) HSP 1 Score: 91.7 bits (226), Expect = 4.100e-15 Identity = 48/156 (30.77%), Postives = 83/156 (53.21%), Query Frame = 0 Query: 80 KWLIFLTNWSMLLLGTYLW-TAYAASRSLPPXXXXXXXXXXXHHRRRLYQTVWVLRNCTAVAALVVSLLFWTILF-PEIKKTSWVDVHCHAINSVIVLLDLTVTHVPYYFKHGWMGLTYLVTYLLFSIVYWLSGGTDPEGDHYIYPPLNYKHPGEA 234 KW I+LT+W+++ W A ++ L RL+ WV+ V + +V++++WT ++ PEI + V++ H +NSVI+L+DLT+ P H + V Y LFS++Y+L+GGTD + IY L+++ PG++ Sbjct: 58 KWWIYLTHWALIACALQAWLAAIIVTKGLMIDRNEFEWNIHVARESRLHAVYWVVYTIATVYSFIVTIVYWTFVYDPEIHRVDAVNLMVHVLNSVIMLIDLTIVGHPIRLNHAYWTTGIGVLYALFSVIYYLAGGTDRHNESSIYKMLDWQKPGKS 213
BLAST of NO29G00840 vs. NCBI_GenBank
Match: XP_013088056.1 (PREDICTED: protein rolling stone-like [Biomphalaria glabrata]) HSP 1 Score: 91.7 bits (226), Expect = 4.100e-15 Identity = 41/105 (39.05%), Postives = 77/105 (73.33%), Query Frame = 0 Query: 131 WVLRNCTAVAALVVSLLFWTILFPEIKKTSWVDVHCHAINSVIVLLDLTVTHVPYYFKHGWMGLTYLVTYLLFSIVYWLSGGTDPEGDHYIYPPLNY-KHPGEAA 235 WVL+N + V++L+V+++FW +++ +T +V ++ H +NSV+VL D+ ++ P +H ++ L++ V+Y+LF+ +YW++GGT+ +G HYIY L+Y + PG+AA Sbjct: 156 WVLQNISNVSSLLVTVMFWALVYTGNSQT-YVSINSHIMNSVLVLCDIMISRAPCRLQHLYIPLSFNVSYVLFTFIYWIAGGTNNQGQHYIYKMLDYTQAPGKAA 259
BLAST of NO29G00840 vs. NCBI_GenBank
Match: XP_021700554.1 (protein rolling stone isoform X1 [Aedes aegypti] >XP_021700555.1 protein rolling stone isoform X1 [Aedes aegypti]) HSP 1 Score: 91.7 bits (226), Expect = 4.100e-15 Identity = 48/156 (30.77%), Postives = 83/156 (53.21%), Query Frame = 0 Query: 80 KWLIFLTNWSMLLLGTYLW-TAYAASRSLPPXXXXXXXXXXXHHRRRLYQTVWVLRNCTAVAALVVSLLFWTILF-PEIKKTSWVDVHCHAINSVIVLLDLTVTHVPYYFKHGWMGLTYLVTYLLFSIVYWLSGGTDPEGDHYIYPPLNYKHPGEA 234 KW I+LT+W+++ W A ++ L RL+ WV+ V + +V++++WT ++ PEI + V++ H +NSVI+L+DLT+ P H + V Y LFS++Y+L+GGTD + IY L+++ PG++ Sbjct: 75 KWWIYLTHWALIACALQAWLAAIIVTKGLMIDRNEFEWNIHVARESRLHAVYWVVYTIATVYSFIVTIVYWTFVYDPEIHRVDAVNLMVHVLNSVIMLIDLTIVGHPIRLNHAYWTTGIGVLYALFSVIYYLAGGTDRHNESSIYKMLDWQKPGKS 230
BLAST of NO29G00840 vs. NCBI_GenBank
Match: XP_019529002.1 (PREDICTED: protein rolling stone-like [Aedes albopictus] >XP_019529003.1 PREDICTED: protein rolling stone-like [Aedes albopictus] >XP_019529004.1 PREDICTED: protein rolling stone-like [Aedes albopictus] >XP_019529108.1 PREDICTED: protein rolling stone-like [Aedes albopictus] >XP_019529109.1 PREDICTED: protein rolling stone-like [Aedes albopictus]) HSP 1 Score: 91.3 bits (225), Expect = 5.300e-15 Identity = 47/156 (30.13%), Postives = 83/156 (53.21%), Query Frame = 0 Query: 80 KWLIFLTNWSMLLLGTYLW-TAYAASRSLPPXXXXXXXXXXXHHRRRLYQTVWVLRNCTAVAALVVSLLFWTILF-PEIKKTSWVDVHCHAINSVIVLLDLTVTHVPYYFKHGWMGLTYLVTYLLFSIVYWLSGGTDPEGDHYIYPPLNYKHPGEA 234 KW I+LT+W+++ W A ++ L RL+ WV+ V + +V++++WT ++ PE+ + V++ H +NSVI+L+DLT+ P H + V Y LFS++Y+L+GGTD + IY L+++ PG++ Sbjct: 75 KWWIYLTHWALIACALQAWLAAIIVTKGLMIDRNEFEWNIHVARESRLHAVYWVVYTIATVYSFIVTIVYWTFVYDPEVHRVDAVNLMVHVLNSVIMLIDLTIVGHPIRLNHAYWTTGIGVAYALFSVIYYLAGGTDRHNESSIYRMLDWQKPGKS 230
BLAST of NO29G00840 vs. NCBI_GenBank
Match: XP_003726784.1 (PREDICTED: protein rolling stone [Strongylocentrotus purpuratus]) HSP 1 Score: 90.9 bits (224), Expect = 7.000e-15 Identity = 59/197 (29.95%), Postives = 104/197 (52.79%), Query Frame = 0 Query: 39 STYRCVIASYWTFWVLLSILGSVGVPIPAPLFGVMDND-MDIKWLIFLTNWSMLLLGTYLWTAYAASRSLPPXXXXXXXXXXXHHRRRLYQTVWVLRNCTAVAALVVSLLFWTILFPEI--KKTSWVDVHCHAINSVIVLLDLTVTHVPYYFKHGWMGLTYLVTYLLFSIVYWLSGGTDPEGDHYIYPPLNY-KHPG 232 +TYR ++A Y+ +++ FGV + + +K+LI+LT+W+ +++ Y A + + R+ Q W L N +A +L+V++++WT L P + K ++DV H + +VI L+D+ +T V F H YL YLLF+++YW +GGTDP G+ +IYP +++ +PG Sbjct: 41 ATYRLILALYFFAFLI--------------FFGVSSAEFLGVKFLIYLTDWTYIVVTLYAMVACFNTLTTKSCYCIGGCIGKGIFRK---QVQWFLLNISAAVSLIVTVVYWTALRPLMSEKLPVYLDVTIHLLPAVICLVDILLTTVIVRFVHVVYPFAYLFFYLLFAVIYWAAGGTDPAGNPFIYPIIDFGNYPG 220
BLAST of NO29G00840 vs. NCBI_GenBank
Match: XP_013419757.1 (protein rolling stone [Lingula anatina]) HSP 1 Score: 90.1 bits (222), Expect = 1.200e-14 Identity = 72/240 (30.00%), Postives = 108/240 (45.00%), Query Frame = 0 Query: 20 SHPRREDFLYFRGSSKKSISTYRCVIASYWTFWVLLSILGSVGVPIPAPLFGVMDNDMDIKWLIFLTNWSMLLL--GTYLWTAYAASRSLPPXXXXXXXXXXXHHRRRLYQTVWVLRNCTAVAALVVSLLFWTILFPEI----KKTSWVDVHCHAINSVIVLLDLTVTHVPYYFKHGWMGLTYLVTYLLFSIVYWLSGGTDPEGDHYIYPPLNYKHPGEAAGLXXXXXXXXXPAVHTMLY 254 SH + F+ +G + YR + A + W++LS GV IP + N IKW I+LTNWS L+L + A A S + H + WV+ N ++ AA+VV+ L+W + P + ++DV H N++ VL D+ +T P H Y + YL+FS+VY + GT+ YIYP L++ PG AA P V +LY Sbjct: 22 SHENPQLFVTAQGGFGIAYVIYRVIWALFHVTWIILS-----GV-IPYSWYSSESN--RIKWFIYLTNWSYLILTVSAIIQAAVAISHYV---KRRKHDGVSNHAMTWYLKMAWVIYNISSNAAIVVAALYWGLRIPPKLAAGGEIHYMDVGTHLGNAIYVLSDIFITATPVRIYHFLHSSLYAIVYLIFSVVYDVLKGTNAVEGSYIYPQLDWDVPGTAAIYAVLVALVAVPLVQCVLY 250
BLAST of NO29G00840 vs. NCBI_GenBank
Match: XP_013393891.1 (protein rolling stone-like [Lingula anatina]) HSP 1 Score: 89.4 bits (220), Expect = 2.000e-14 Identity = 70/239 (29.29%), Postives = 110/239 (46.03%), Query Frame = 0 Query: 20 SHPRREDFLYFRGSSKKSISTYRCVIASYWTFWVLLSILGSVGVPIPAPLFGVMDNDMDIKWLIFLTNWSMLLLGTYLWTAYAASRSLPPXXXXXXXXXXXHHRRRLY-QTVWVLRNCTAVAALVVSLLFWTILFPEI----KKTSWVDVHCHAINSVIVLLDLTVTHVPYYFKHGWMGLTYLVTYLLFSIVYWLSGGTDPEGDHYIYPPLNYKHPGEAAGLXXXXXXXXXPAVHTMLY 254 +H + F+ +G + YR + A + W++LS GV IP + N IKW I+LTNWS L+L + A+ ++ +H Y + WV+ N ++ AA+VV+ L+W + P + ++DV H N++ VL D+ +T P H Y + YL+FS+VY + GT+ YIYP L++ PG AA P V +LY Sbjct: 22 NHENPQLFVTAQGGFGIAYVIYRVLWALFHVTWIILS-----GV-IPYSWYSSESN--RIKWFIYLTNWSYLIL--TVSAIIQAAVAINHYVKRRKHDGVSNHAMTWYLKMAWVIYNISSNAAIVVAALYWGLRIPPKLAAGGEIHYIDVGTHLGNAIYVLSDIFITATPVRIYHFLHSSLYAIVYLIFSVVYDVLNGTNAVEGSYIYPQLDWDVPGTAAIYAVLVALVAVPLVQCVLY 250 The following BLAST results are available for this feature:
BLAST of NO29G00840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G00840 ID=NO29G00840|Name=NO29G00840|organism=Nannochloropsis oceanica|type=gene|length=1458bpback to top protein sequence of NO29G00840.1 >NO29G00840.1-protein ID=NO29G00840.1-protein|Name=NO29G00840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=286bpback to top Synonyms
Publications
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