NO29G00830, NO29G00830 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO29G00830 vs. NCBI_GenBank
Match: EWM29475.1 (hypothetical protein Naga_100128g9 [Nannochloropsis gaditana]) HSP 1 Score: 98.6 bits (244), Expect = 9.900e-17 Identity = 53/140 (37.86%), Postives = 77/140 (55.00%), Query Frame = 0 Query: 150 YLALLSRQHPFPFCAWQVIFDPRLFTPVLLDTNSVYWLQALHFRTR-NDVFRITGTFPLVRYFSFQSYDSAGKPLSSLPDYQLQPQSSGGINPFVTLSSSFHINNTSGSSSSSDCLGQFEIYVTADGKHGYPNELAALRD 289 Y L +PFCAW D ++TP+LLD N+VY Q L F + V++I+ +FP V YFS+++Y G PL+SLPD ++ P S G NP+ ++ + G +EIYVT DG G+PNE+ L + Sbjct: 5 YADLAIASSEYPFCAWDATTDESIYTPLLLDPNAVYQPQLLSFAAHPHRVYKISASFPRVVYFSYETYSLRGHPLTSLPDLRIDP--SWGKNPY-------------REETTEEGAGTYEIYVTRDGNKGWPNEVRGLSE 129
BLAST of NO29G00830 vs. NCBI_GenBank
Match: EWM21339.1 (hypothetical protein Naga_100075g21 [Nannochloropsis gaditana]) HSP 1 Score: 86.3 bits (212), Expect = 5.100e-13 Identity = 56/148 (37.84%), Postives = 79/148 (53.38%), Query Frame = 0 Query: 197 DVFRITGTFPLVRYFSFQSYDSAGKPLSSLPDYQLQPQSSGGINPFVTLSSSFHINNTSGSSSSSDCLGQFEIYVTADGKHGYPNELAALRDPSLFISTSTILYRLYGVDPSVLEEGERGERDGGENEEVRTRHRWELWGFVEPPVVE 345 +V+RI G FP VRYFSF YD++ + +S+L D ++P S G NPF + + D +G +EIYV+ DG GYPNE+AALR P + + +RL +DP GE G+N E WG+V+ P+VE Sbjct: 157 EVYRIRGKFPYVRYFSFTVYDASLQSISTLHDTDIRP--SSGKNPF------------NDIEVTEDNMGTYEIYVSKDGSKGYPNEMAALR-PDSTSPYALLAFRLQLLDP------RAGEDRSGKNRE---------WGYVDMPLVE 274
BLAST of NO29G00830 vs. NCBI_GenBank
Match: EWM22223.1 (hypothetical protein Naga_100312g6 [Nannochloropsis gaditana]) HSP 1 Score: 78.6 bits (192), Expect = 1.100e-10 Identity = 67/217 (30.88%), Postives = 99/217 (45.62%), Query Frame = 0 Query: 136 AVGKLSGLDIAKEIYL-----ALLSRQHPFPF-CAWQVIFDPRLFTPVLLDTNSVYW-LQALHFRTRNDVFRITGTFPLVRYFSFQSYDSAG-KPLSSLPDYQLQPQSSGGINPFVTLSSSFHINNTSGSSSSSDCLGQFEIYVTADGKHGYPNELAALRDPSLFISTSTILYRLYGVDPSVLEEGERGERDGGENEEVRTRHRWELWGFVEPPVVE 345 AV +L D K ++L AL F CAWQ F D +VY L + DV RI G +P VRYFS+QSYD P++S+ DY++ +S G+NPF T + T G G+++++VT +G GYPNEL + S + + +L R+Y D ++ + ++WG V PPVV+ Sbjct: 11 AVNQLDMTDAQKAVFLSYTSYALAGLNASIEFNCAWQASVGLN-FNIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSYDPKSLDPVASVRDYEI--KSVRGVNPFATPGT------TLGDK------GKYQVHVTLNGDQGYPNELPTIASGS-NATGAFVLLRVYAYDK-------------------QSPDKTDIWGAVAPPVVK 192
BLAST of NO29G00830 vs. NCBI_GenBank
Match: XP_005854425.1 (hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526] >EKU21938.1 hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 78.2 bits (191), Expect = 1.400e-10 Identity = 69/226 (30.53%), Postives = 101/226 (44.69%), Query Frame = 0 Query: 127 ASVTLALAKAVGKLSGLDIAKEIYL-----ALLSRQHPFPF-CAWQVIFDPRLFTPVLLDTNSVYW-LQALHFRTRNDVFRITGTFPLVRYFSFQSYDSAG-KPLSSLPDYQLQPQSSGGINPFVTLSSSFHINNTSGSSSSSDCLGQFEIYVTADGKHGYPNELAALRDPSLFISTSTILYRLYGVDPSVLEEGERGERDGGENEEVRTRHRWELWGFVEPPVVE 345 A V AV +L D K ++L AL F CAWQ F D +VY L + DV RI G +P VRYFS+QSYD P++S+ DY++ +S G+NPF T + T G G+++++VT +G GYPNEL + S + + +L R+Y D ++ + ++WG V PPVV+ Sbjct: 148 AQVNTMANVAVNQLDMTDAQKAVFLSYTSYALAGLNASIEFNCAWQASVGLN-FNIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSYDPKSLDPVASVRDYEI--KSVRGVNPFATPGT------TLGDK------GKYQVHVTLNGDQGYPNELPTIASGS-NATGAFVLLRVYAYDK-------------------QSPDKTDIWGAVAPPVVK 338
BLAST of NO29G00830 vs. NCBI_GenBank
Match: EWM21022.1 (hypothetical protein Naga_100271g2 [Nannochloropsis gaditana]) HSP 1 Score: 77.4 bits (189), Expect = 2.400e-10 Identity = 52/171 (30.41%), Postives = 75/171 (43.86%), Query Frame = 0 Query: 179 LDTNSVYWLQALHFRTRNDVFRITGTFPLVRYFSFQSYDSAGKPLSSLPDYQLQPQSSGGINPFVTLSSSFHINNTSGSSSSSDCLGQFEIYVTADGKHGYPNELAALRDPSLFISTSTILYRLYGVDPSVLEEGERGERDGGENEEVRTRHRWELWGFVEPPVVERMVVG 350 +D NS + ND+ I G+FP RYFSFQ+YD P+ L D + P +G NP+ T G+ + G++ +Y+T DGK G+ NEL + +++R+YGVDPS D G WGFV P V ++G Sbjct: 124 VDQNSAAHIMIFPAFGPNDLVMIEGSFPAARYFSFQTYDGNFSPVGFLRDAHIHPLGTGR-NPYFTPPPD---GTEEGAGEEAREEGRYRLYLTKDGKRGFRNELGVAKSNFSLGGLVLVIFRIYGVDPSA------NATDPG----------LAPWGFVPPIQVRSKLLG 274
BLAST of NO29G00830 vs. NCBI_GenBank
Match: EWM25888.1 (hypothetical protein Naga_100054g2 [Nannochloropsis gaditana]) HSP 1 Score: 70.9 bits (172), Expect = 2.200e-8 Identity = 110/481 (22.87%), Postives = 178/481 (37.01%), Query Frame = 0 Query: 161 PFCAWQVIFDPRLFTPVLLDTNSVYWLQALHFRTRNDVFRITGTFPLVRYFSFQSYDSAGKPLS-SLPDYQLQPQSSGGINPFVTLSSSFHINNTSGSSSSSDCLGQFEIYVTADGKHGYPNELAALRD---PSLFISTSTILYRLYGVDPSVLEEGERGERDGGENEEVRTRHRWEL---WGFVEPPVVERMVVGKRKXXXXXXXGGGRKEDMIMGMEGEEDGGPTRAVMTATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFALPSLPPSSWEEWELLPPCSQLDLLRVAQEFRTAEKKYLFP------LPAQDEVCGLFE---------KAGAGREEGRVVPSMFPYGHLESRGVHDYVVYTNKDS-NYLYWCDATHR-----MGDGDADKFVVVLRGRLPITPTGLFVGEGEEGKEGGPRIADVGEYEARYVSVSTVENMAPSDTYQSVYDAELKRYFLK 614 P+CAW+ + + + D+ S+Y + ++ R ++ + + P RYFSFQSY S SL D + P S G N + L+++ +G+ G +E+ VT+ G HG+ NEL AL D FI + +R+Y L D GE R R+ E WG+ PP V + +R GGG+ E + + + G V S P+LP + P + Q+F + KYLF +P + + G + + G REE R + + H V +K S + + R G G+ + + GRLP T L+ P IA+ +Y+ RYVS+S+V P YQ+++DA++ ++L+ Sbjct: 46 PYCAWRFVSNFASWNVAFPDSTSIYHVSLMYIRRGEEIKISSSSLPYARYFSFQSYSIPDFVSSASLRDVDIIP-SGNGPNCYTNLTAAM-----AGAKQ-----GGYEVVVTSHGDHGHANELRALADDRASGYFI----LFFRIYQDRVGSLPPMSELADDMGECFGPRGRYPTETPQEWGWACPPSVAVKRLSRR-------VGGGKFETLPLCGYRRKHGIVYNDVTPPV-----------------------------------------IACPSVRAPNLP------FNFFLPSPDY----IKQKFANKDAKYLFSCAEAPWVPEKSKGAGGWSFWKGQRSPVEEGREREENREGAT--------KKETHRKPVARDKPSEDGEVEGEGRKRAPEAGRGSGEGRELWARVTGRLPRTANSLY---------EPPFIANFSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLR 436
BLAST of NO29G00830 vs. NCBI_GenBank
Match: EWM25941.1 (hypothetical protein Naga_100469g5 [Nannochloropsis gaditana]) HSP 1 Score: 69.3 bits (168), Expect = 6.400e-8 Identity = 46/156 (29.49%), Postives = 76/156 (48.72%), Query Frame = 0 Query: 154 LSRQHPFPFCAWQVIFDPRLFTPVLLDTNSVYWLQALHFRTRNDVFRITGTFPLVRYFSFQSYDS--AGKPLSSLPDYQLQPQSSGGINPFVTLSSSFHINNTSGSSSSSDCLGQFEIYVTADGKHGYPNELAALRDPSLFISTSTILYRLYGVDP 308 ++R + +P C W + L+D N+VYW Q + N +++ G FP YFS+Q Y S + P + D+ ++P G NPF S ++ + +G +E+Y+T G+ GY NE LR P+ I + ++ R+Y DP Sbjct: 117 VARGYSWPHCYWHAKYAINYTHFGLIDPNAVYWGQLVRGSGANVAYKMKGRFPKSIYFSWQVYASQTSAAPDQKITDFHVKP--LWGTNPF------------SNPDATPEDMGGYEVYLTPSGEEGYVNE---LRLPNATI--NQLILRMYKPDP 253 The following BLAST results are available for this feature:
BLAST of NO29G00830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7 Position : 0 Zoom : x 1
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G00830 ID=NO29G00830|Name=NO29G00830|organism=Nannochloropsis oceanica|type=gene|length=2788bpback to top protein sequence of NO29G00830.1 >NO29G00830.1-protein ID=NO29G00830.1-protein|Name=NO29G00830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=848bpback to top Synonyms
Publications
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