NO29G00820, NO29G00820 (gene) Nannochloropsis oceanica

Overview
NameNO29G00820
Unique NameNO29G00820
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2597
Alignment locationchr29:299442..302038 +

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Properties
Property NameValue
DescriptionDeoxyUTP pyrophosphatase, dUTPase subfamily
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:299442..302038 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036157dUTPase-like_sf
IPR029054dUTPase-like
Vocabulary: Biological Process
TermDefinition
GO:0046080dUTP metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004170dUTP diphosphatase activity
Homology
BLAST of NO29G00820 vs. NCBI_GenBank
Match: EWM21304.1 (DeoxyUTP pyrophosphatase, dUTPase subfamily [Nannochloropsis gaditana])

HSP 1 Score: 325.5 bits (833), Expect = 1.900e-85
Identity = 200/330 (60.61%), Postives = 220/330 (66.67%), Query Frame = 0
Query:    1 MLIGVTWSPVLST-VCRRATTA--FLASTSSSSASSFGVAPRP---NPRRLQQLFLPTLLFSLRSFSSPI-PIHQQHQYTRYLCAMSLSRPTEVMQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAGGKALVKTDLSIAIPENTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGQEDFPVVKGDRVAQLILEKICMAR-VEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPG----QKGAQLLVMLKEVAEAFPSEEAWAKSLKPLALVEDSRLYAAWSAYQVTKDLKDLKETLRLITPAEQ 319
            M +G+ WS  LST VC++A TA  F +S S   AS F V   P      RLQ LFLPTLLF++R FS P  PI       R LCAMSL R +E +QVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPA GKALVKTDLSIAIP NTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHG EDF V +GDRVAQLILE+I MA  VE                                            V G      GAQLL+MLKEVA++   ++ W KSLKPLAL  D+R+YAAW AYQ  KD+ DLKETLRLITP+EQ
Sbjct:    1 MPVGIFWSSSLSTAVCKKAVTALSFRSSPSVPCASCFSVLAFPTAFRAPRLQHLFLPTLLFTIR-FSVPTNPIFPPS--FRSLCAMSLPRMSETLQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAKGKALVKTDLSIAIPPNTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGTEDFGVSRGDRVAQLILERISMAAVVEVEEGGELPETKRGQGGFGSTGVRHQGQLAEREEGGNGEGKRMRVVEGATSVPTGAQLLLMLKEVADS-GEDKDWIKSLKPLALAGDTRMYAAWGAYQCNKDMSDLKETLRLITPSEQ 326          
BLAST of NO29G00820 vs. NCBI_GenBank
Match: CBJ28166.1 (deoxyuridine 5'-triphosphate nucleotidohydrolase [Ectocarpus siliculosus])

HSP 1 Score: 194.5 bits (493), Expect = 5.000e-46
Identity = 97/120 (80.83%), Postives = 107/120 (89.17%), Query Frame = 0
Query:   86 EVMQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAGGKALVKTDLSIAIPENTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGQEDFPVVKGDRVAQLILEKICMARVE 206
            E MQVK+LS++A++PVRGSE AAG+DLASA +  VPAG +ALVKTDLSIAIP NTYARIAPRSGLA KK IDVGAGVVDYDYRGPVGVVLFNHG EDF V KGDRVAQLILE+ICMA +E
Sbjct:   38 ETMQVKKLSENAIMPVRGSEHAAGFDLASAYEATVPAGRQALVKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGSEDFKVQKGDRVAQLILERICMADIE 157          
BLAST of NO29G00820 vs. NCBI_GenBank
Match: XP_002502323.1 (deoxyuridine 5'-triphosphate nucleotidohydrolase [Micromonas commoda] >ACO63581.1 deoxyuridine 5'-triphosphate nucleotidohydrolase [Micromonas commoda])

HSP 1 Score: 181.8 bits (460), Expect = 3.300e-42
Identity = 89/119 (74.79%), Postives = 103/119 (86.55%), Query Frame = 0
Query:   86 EVMQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAGGKALVKTDLSIAIPENTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGQEDFPVVKGDRVAQLILEKICMARV 205
            ++++VK++S+HA LPVRGS+ AAGYDLASA D VVPA GK LVKTDLSIAIP++TYARIAPRSGLAWK  ID GAGVVDYDYRG VGV+LFNHG++DF V KGDRVAQLILE+I    V
Sbjct:    3 DLLRVKKISEHATLPVRGSDGAAGYDLASAYDYVVPARGKELVKTDLSIAIPKDTYARIAPRSGLAWKHFIDTGAGVVDYDYRGNVGVILFNHGEKDFEVKKGDRVAQLILERITTPEV 121          
BLAST of NO29G00820 vs. NCBI_GenBank
Match: XP_001422063.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABP00357.1 predicted protein [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 180.3 bits (456), Expect = 9.700e-42
Identity = 91/117 (77.78%), Postives = 97/117 (82.91%), Query Frame = 0
Query:   88 MQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAGGKALVKTDLSIAIPENTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGQEDFPVVKGDRVAQLILEKICMARV 205
            ++VKRLS  A +P RGSE AAGYDLASA D VVPA GK LVKTDLSIAIP  TYAR+APRSGLAWKK IDVGAGVVDYDYRG VGV+LFNHG EDF V KGDRVAQLILE+I    V
Sbjct:    6 LRVKRLSDDATMPTRGSEGAAGYDLASAHDCVVPARGKELVKTDLSIAIPLGTYARVAPRSGLAWKKFIDVGAGVVDYDYRGNVGVILFNHGDEDFEVKKGDRVAQLILEQILTPEV 122          
BLAST of NO29G00820 vs. NCBI_GenBank
Match: XP_003084019.1 (DeoxyUTP pyrophosphatase [Ostreococcus tauri] >CAL57986.1 DeoxyUTP pyrophosphatase [Ostreococcus tauri])

HSP 1 Score: 178.3 bits (451), Expect = 3.700e-41
Identity = 86/112 (76.79%), Postives = 98/112 (87.50%), Query Frame = 0
Query:   88 MQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAGGKALVKTDLSIAIPENTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGQEDFPVVKGDRVAQLILEKI 200
            ++VK+LS+HA +PVRGS  AAGYDL+SA D VVPA GK LVKTD+S+AIPE TYAR+APRSGLAWK  IDVGAGVVDYDYRG VGV+LFNHG+ DF V KGDRVAQLILE+I
Sbjct:    5 LRVKKLSEHATVPVRGSSGAAGYDLSSAYDYVVPARGKELVKTDISVAIPEGTYARVAPRSGLAWKSFIDVGAGVVDYDYRGNVGVILFNHGENDFVVKKGDRVAQLILEQI 116          
BLAST of NO29G00820 vs. NCBI_GenBank
Match: OUS45518.1 (hypothetical protein BE221DRAFT_146669 [Ostreococcus tauri])

HSP 1 Score: 178.3 bits (451), Expect = 3.700e-41
Identity = 86/112 (76.79%), Postives = 98/112 (87.50%), Query Frame = 0
Query:   88 MQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAGGKALVKTDLSIAIPENTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGQEDFPVVKGDRVAQLILEKI 200
            ++VK+LS+HA +PVRGS  AAGYDL+SA D VVPA GK LVKTD+S+AIPE TYAR+APRSGLAWK  IDVGAGVVDYDYRG VGV+LFNHG+ DF V KGDRVAQLILE+I
Sbjct:    5 LRVKKLSEHATVPVRGSSGAAGYDLSSAYDYVVPARGKELVKTDISVAIPEGTYARVAPRSGLAWKSFIDVGAGVVDYDYRGNVGVILFNHGENDFVVKKGDRVAQLILEQI 116          
BLAST of NO29G00820 vs. NCBI_GenBank
Match: XP_003064085.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH51707.1 predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 175.3 bits (443), Expect = 3.100e-40
Identity = 85/119 (71.43%), Postives = 100/119 (84.03%), Query Frame = 0
Query:   81 LSRPTEVMQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAGGKALVKTDLSIAIPENTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGQEDFPVVKGDRVAQLILEKI 200
            + R  + ++VK++S+HA LP RGS+ AAGYDLASA D V+PA GK LVKTDLSIAIP++TYARIAPRSGLAWK  ID GAGVVDYDYRG VGV+LFNH  +DF V KGDRVAQ+ILE+I
Sbjct:   24 MPRLEDQLRVKKISEHATLPARGSDGAAGYDLASAYDYVIPARGKELVKTDLSIAIPKDTYARIAPRSGLAWKHFIDTGAGVVDYDYRGNVGVILFNHSDKDFEVKKGDRVAQMILERI 142          
BLAST of NO29G00820 vs. NCBI_GenBank
Match: ETI47697.1 (hypothetical protein F443_08130 [Phytophthora parasitica P1569])

HSP 1 Score: 174.5 bits (441), Expect = 5.300e-40
Identity = 83/118 (70.34%), Postives = 97/118 (82.20%), Query Frame = 0
Query:   82 SRPTEVMQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAGGKALVKTDLSIAIPENTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGQEDFPVVKGDRVAQLILEKI 200
            SRP  V++VK+++  A+LP RGS  AAG DL++A D V+PAGGK LVKTDL IA+P+  YAR+APRSGLAWKK ID GAGVVD DYRG VGV+LFNH  EDFPV +GDRVAQLILEKI
Sbjct:   25 SRPAPVLRVKKMTPEAILPTRGSSLAAGLDLSAAYDAVIPAGGKGLVKTDLIIAVPDGCYARVAPRSGLAWKKFIDTGAGVVDADYRGNVGVILFNHSNEDFPVKRGDRVAQLILEKI 142          
BLAST of NO29G00820 vs. NCBI_GenBank
Match: XP_008904878.1 (hypothetical protein PPTG_11335 [Phytophthora parasitica INRA-310] >ETN09732.1 hypothetical protein PPTG_11335 [Phytophthora parasitica INRA-310])

HSP 1 Score: 174.5 bits (441), Expect = 5.300e-40
Identity = 83/118 (70.34%), Postives = 97/118 (82.20%), Query Frame = 0
Query:   82 SRPTEVMQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAGGKALVKTDLSIAIPENTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGQEDFPVVKGDRVAQLILEKI 200
            SRP  V++VK+++  A+LP RGS  AAG DL++A D VVPAGGK LVKTDL IA+P+  YAR+APRSGLAWKK ID GAGV+D DYRG VGV+LFNH  EDFPV +GDRVAQLILEKI
Sbjct:   25 SRPAPVLRVKKMTPEAILPTRGSSLAAGLDLSAAYDAVVPAGGKGLVKTDLIIAVPDGCYARVAPRSGLAWKKFIDTGAGVIDADYRGNVGVILFNHSNEDFPVKRGDRVAQLILEKI 142          
BLAST of NO29G00820 vs. NCBI_GenBank
Match: ETP45536.1 (hypothetical protein F442_08066 [Phytophthora parasitica P10297])

HSP 1 Score: 174.5 bits (441), Expect = 5.300e-40
Identity = 83/118 (70.34%), Postives = 97/118 (82.20%), Query Frame = 0
Query:   82 SRPTEVMQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAGGKALVKTDLSIAIPENTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGQEDFPVVKGDRVAQLILEKI 200
            SRP  V++VK+++  A+LP RGS  AAG DL++A D VVPAGGK LVKTDL IA+P+  YAR+APRSGLAWKK ID GAGV+D DYRG VGV+LFNH  EDFPV +GDRVAQLILEKI
Sbjct:   25 SRPAPVLRVKKMTPEAILPTRGSSLAAGLDLSAAYDAVVPAGGKGLVKTDLIIAVPDGCYARVAPRSGLAWKKFIDTGAGVIDADYRGNVGVILFNHSNEDFPVKRGDRVAQLILEKI 142          
The following BLAST results are available for this feature:
BLAST of NO29G00820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21304.11.900e-8560.61DeoxyUTP pyrophosphatase, dUTPase subfamily [Nanno... [more]
CBJ28166.15.000e-4680.83deoxyuridine 5'-triphosphate nucleotidohydrolase [... [more]
XP_002502323.13.300e-4274.79deoxyuridine 5'-triphosphate nucleotidohydrolase [... [more]
XP_001422063.19.700e-4277.78predicted protein [Ostreococcus lucimarinus CCE990... [more]
XP_003084019.13.700e-4176.79DeoxyUTP pyrophosphatase [Ostreococcus tauri] >CAL... [more]
OUS45518.13.700e-4176.79hypothetical protein BE221DRAFT_146669 [Ostreococc... [more]
XP_003064085.13.100e-4071.43predicted protein [Micromonas pusilla CCMP1545] >E... [more]
ETI47697.15.300e-4070.34hypothetical protein F443_08130 [Phytophthora para... [more]
XP_008904878.15.300e-4070.34hypothetical protein PPTG_11335 [Phytophthora para... [more]
ETP45536.15.300e-4070.34hypothetical protein F442_08066 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL061nonsL061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005202NSK005202Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G00820.1NO29G00820.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|601336gene_8255Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100350g4gene9118Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G00820.1NO29G00820.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G00820 ID=NO29G00820|Name=NO29G00820|organism=Nannochloropsis oceanica|type=gene|length=2597bp
AATAAAAGCTTGCCGCCACGTAAAGTGTCCGCATGCTAATTGGTGTCACC
TGGTCCCCGGTCCTTTCAACTGTGTGTAGGCGTGCGACGACGGCTTTTCT
AGCCTCCACTTCTTCATCCTCTGCTTCTTCGTTCGGGGTCGCGCCTCGAC
CAAACCCCAGGCGTTTACAACAGCTCTTTTTGCCCACACTTCTCTTCTCG
CTACGgtacatgaaagcatgaatgtggatttgatggtaatgtttgtcgtt
tcatctatcttggcctatttctgcttaccaatcccttcccgctctttttc
cacattaccaccgcacgcgagtagAAGCTTTTCATCGCCCATTCCCATTC
ATCAGCAGCACCAATATACACGTTATCTCTGTGCCATGTCTCTCTCGCGA
CCGACTGAAGTCATGCAGgtacatcggtgtcgctcgaaagaaaagggagg
gagggagggagggagggagggaggcaaggagggcttagtggcgccaaata
ggaaggaaagaatgcccctctcttaagtacggacatggaggaggacgtca
gtgactcatactacttccatcatgattcttctttcttctcttcgtctgtc
gttctttccccactgccatgactagGTAAAACGCCTCTCGCAGCACGCCG
TCCTTCCTGTGCGTGGCTCGGAATGGGCAGCCGGTTATGATCTGGCAAGg
taaatatacattaagggaacaagagaaagaggatcggaaaaggataacca
aggaagtatttcgagagaagagaaccagctgttggagcagcagcgttcac
tcagttgcgtcccttttttccatctttcccacttctgttacccgcagaca
cactcatcttttcgccattcccgttaattttttttccatttctgtcgccc
acccgcagactgatctttcccgcttccccactaattttcccattcctgtc
acccacagCGCTGAAGACACGGTGGTCCCCGCCGGTGGGAAGGCGCTCGT
CAAGACCGACCTCTCCATCGCCATTCCCGAGAACACCTACGCTCGCATCG
gtaagtcctccttccctccctccctccctccctctctcccccctgtattc
ttgttctttattcagatgcggcgctcactcctcttactgcgcttccgtcc
gcgctggtttcccccccaacccttcctctctccctcccccctcctcccct
tcctccaactcacctattaaagaaaaataagcattacacccacctcctca
actgctccctccctccctgccctttctcctgcagCCCCTCGCTCGGGCCT
TGCGTGGAAGAAGCACATAGACGTAGGTGCGGGTGTGGTGGATTATGATT
ACCGCGGACCCGTGGGTGTAGTTCTCTTCAATCACGGCCAGGAGGACTTT
CCCGTTGTCAAGGGCGATCGTGTGGCCCAGCTAATCTTGGAAAAGATCTG
TATGGCGCGTGTGGAGGAGGTGACGGAGCTTTCGGAGACGAAGAGGGGAG
CAGGGGGCTTTGGGAGTACCGGAATGCAGGGACAGCAGGCGCAGCAGCAG
CAAAAGGGAGAGCAGGAGGGGAAGAGGATGAAAGTAGAGGAAGTGGAAGg
tgagtggcggacaataagtggagggagcgtgggagggagggagggaaggg
aaaacgcggttttcccccttcctttttcaaaagaatgtacacaataatat
atggatatatatgttctatatatatatatatataattattataaataaat
agaactttagtttttcccgacaaaatcttttctcctctgtccttcccccc
ccatcccaaaaattttccctacacagTTCCGGGGCAAAAGGGCGCGCAGC
TACTGGTGATGCTGAAGGAGGTTGCTGAAGCCTTCCCCAGCGAGGAGGCA
TGGGCTAAGAGCgtaagtagagagaggctgttgggaaagaaatggaaaag
aggaaggaaaaatagcatgttatataggatggatcatactttttcagaga
tgtgctcacgaaaatactaacgaaaacatttttctcctcccctccctcca
tccctcattccctgcagCTCAAGCCTCTTGCCTTGGTGGAGGACTCGCGG
CTCTACGCGGCATGGAGTGCGTATCAGGTGACGAAGGACTTGAAGGATTT
GAAGGAGACTCTTCGTTTGATTACGCCGGCGGAACAGTAATTTAACTAAT
GCCTGTGCGATAGGATAAGGGAGAGAGAGAAAGAGCACGTATGGTACAGA
GACATGAGGACAGGTTCAAAAGAGAAGTACAAACCTCAGTAACTCAGAAG
AATATACTAAGGGATTATGCCTGCGTACATGGGTACATACATGCTGCGTA
CGGGATTGATGGTATGAGAGATTGTGGACATGAGGTCAACGGGCGGAGAA
AACCGTTGATCATGTGGGGAGGTTGGTGCAGCGTTGTGGCACACGATTGC
CTGTCTACCTAGAACTGAACGAAGAAAGAATGTGGGTCGCGCAGAGATGA
GGGTAACAACAAATCCCTCCTATATTGTACTGTTGCTCTTGTTGATCTTT
CTATTCGCTTCGCACTTCCGCCTCTCTTCATTCTCATTCCTCCCCCT
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protein sequence of NO29G00820.1

>NO29G00820.1-protein ID=NO29G00820.1-protein|Name=NO29G00820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=319bp
MLIGVTWSPVLSTVCRRATTAFLASTSSSSASSFGVAPRPNPRRLQQLFL
PTLLFSLRSFSSPIPIHQQHQYTRYLCAMSLSRPTEVMQVKRLSQHAVLP
VRGSEWAAGYDLASAEDTVVPAGGKALVKTDLSIAIPENTYARIAPRSGL
AWKKHIDVGAGVVDYDYRGPVGVVLFNHGQEDFPVVKGDRVAQLILEKIC
MARVEEVTELSETKRGAGGFGSTGMQGQQAQQQQKGEQEGKRMKVEEVEV
PGQKGAQLLVMLKEVAEAFPSEEAWAKSLKPLALVEDSRLYAAWSAYQVT
KDLKDLKETLRLITPAEQ*
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Synonyms
Publications