NO29G00650, NO29G00650 (gene) Nannochloropsis oceanica

Overview
NameNO29G00650
Unique NameNO29G00650
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1558
Alignment locationchr29:246030..247587 -

Link to JBrowse

Properties
Property NameValue
DescriptionLactoylglutathione lyase / glyoxalase I family protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:246030..247587 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029068Glyas_Bleomycin-R_OHBP_Dase
IPR037523VOC
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
Homology
BLAST of NO29G00650 vs. NCBI_GenBank
Match: EWM21285.1 (lactoylglutathione lyase glyoxalase i-like protein [Nannochloropsis gaditana])

HSP 1 Score: 312.4 bits (799), Expect = 1.500e-81
Identity = 172/279 (61.65%), Postives = 189/279 (67.74%), Query Frame = 0
Query:   15 SSYSSPSGALTFAAAPSAGNLNNDHHDNNMVKKMNYGHGKHHLR-RQLNNHANNNQVHPKPPHSP--PRYCMSDIVAHARQQGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKNKAPYRPFPIVSFNHMSREVLDYELSRDFYCGVLGFIEIPRPAFENEGVWLYGFGLSLHLIKSRYPQKRLLLKGRRIEHFEEALPNVDHMAFITSNLNKVEKQLREHSVFYKRFGSDKTNIHQIFLFDPDGNVIEIGNCAPPVGETVCSRAVGLGGPESP 291
            SS    + A +F   PS  + N+ H     +KK   G G    R   ++    +    P PP SP   RYCM+D++A ARQ                                    +   APYRPFPIVSFNHMS+EVLDYELSRDFYCGVLGFIEIPRPAFENEGVWLYGFGLSLHLIKSRYP+KRLLLKGRRIEHFEEALPNVDHMAFITSNLN+VEKQLREH+VFYKRFGS KTNIHQIFLFDPDGNVIEI NCAPPVGET C R VG+GG   P
Sbjct:   12 SSSLVAAAADSFTFGPSVAS-NSMHRLPTPMKKKMPGQGFPSSRAHAVHLPRPSAPALPAPPGSPTRSRYCMADVMAEARQN-----FQKARGLHPPPRLSAPQPHMSQSHHPPHPATAPAAPYRPFPIVSFNHMSKEVLDYELSRDFYCGVLGFIEIPRPAFENEGVWLYGFGLSLHLIKSRYPEKRLLLKGRRIEHFEEALPNVDHMAFITSNLNEVEKQLREHNVFYKRFGSHKTNIHQIFLFDPDGNVIEISNCAPPVGETTCPRVVGMGGASEP 284          
BLAST of NO29G00650 vs. NCBI_GenBank
Match: GAQ82129.1 (lactoylglutathione lyase / glyoxalase [Klebsormidium nitens])

HSP 1 Score: 105.1 bits (261), Expect = 3.700e-19
Identity = 58/137 (42.34%), Postives = 81/137 (59.12%), Query Frame = 0
Query:  136 RPFPIVSFNHMSREVLDYELSRDFYCGVLGFIEIPRPA-FENEGVWLYGFGLSLHLIKSRYPQKRLLLKGRRIEHFEEALPNVDHMAFITSNLNKVEKQLREHSVFYKRFGSDKTNI--HQIFLFDPDGNVIEIGNC 270
            RP P+ S NH+SR   D   S  FY  VLGFI+I RP+ F+ +G WL+ +G+ LHL+K    +   LL+  R +  +   P  DH++F   N   VE++LRE  V YK+    + NI   QIF  DPDG++IEI +C
Sbjct:    7 RPLPLSSLNHISRNCRDILASVAFYEDVLGFIQIVRPSRFDFDGAWLFQYGIGLHLLKEETDEGLALLERTRCKAID---PRADHISFQADNTGVVEQRLREFGVEYKKQTVIEGNIRVQQIFFHDPDGHMIEICDC 140          
BLAST of NO29G00650 vs. NCBI_GenBank
Match: XP_021984333.1 (uncharacterized protein LOC110880080 [Helianthus annuus] >OTG16761.1 putative lactoylglutathione lyase / glyoxalase I family protein [Helianthus annuus])

HSP 1 Score: 99.8 bits (247), Expect = 1.500e-17
Identity = 58/154 (37.66%), Postives = 84/154 (54.55%), Query Frame = 0
Query:  137 PFPIVSFNHMSREVLDYELSRDFYCGVLGFIEIPRP-AFENEGVWLYGFGLSLHLIKSRYPQKRLLLKGRRIEHFEEALPNVDHMAFITSNLNKVEKQLREHSVFYKRFGSDKTNIH--QIFLFDPDGNVIEIGNC-----APPVGETV--CSR 281
            P  + S NH+S      E S DFY  VLGF+ I RP +F+ +G WL+ FG+ +HL++S  P+         +    E  P  +H++F   ++  VEK+L+E  + YKR   ++  I+  Q+F  DPDG +IEI NC      P  GE V  CSR
Sbjct:    8 PLQLKSINHISLVCRSVEESIDFYTNVLGFVPIRRPGSFDFDGAWLFNFGIGIHLLQSENPE--------NMSKKSEINPKDNHISFQCESMGTVEKKLKEMEIVYKRQRVEEGGIYVDQLFFHDPDGFMIEICNCDNLPVIPIAGEMVRSCSR 153          
BLAST of NO29G00650 vs. NCBI_GenBank
Match: XP_023761767.1 (uncharacterized protein LOC111910213 [Lactuca sativa] >PLY86989.1 hypothetical protein LSAT_5X132120 [Lactuca sativa])

HSP 1 Score: 98.6 bits (244), Expect = 3.400e-17
Identity = 54/136 (39.71%), Postives = 77/136 (56.62%), Query Frame = 0
Query:  137 PFPIVSFNHMSREVLDYELSRDFYCGVLGFIEIPRPA-FENEGVWLYGFGLSLHLIKSRYPQKRLLLKGRRIEHFEEALPNVDHMAFITSNLNKVEKQLREHSVFYKRFGSDKTNIH--QIFLFDPDGNVIEIGNC 270
            P  + S NH+S      + S DFY  +LGF+ I RP  F+ +G WLY +G+ +HLI+S  P K  +LK   I       P   H++F   N+  VEK+L+E  + Y+R   ++  IH  Q+F  DPDG +IEI NC
Sbjct:    6 PLNLTSLNHVSFLCRSLQESVDFYTKILGFVPIKRPQDFDFDGAWLYNYGIGIHLIQSENPDK--VLKKTEIN------PKDHHISFQCENMGAVEKKLKEMGIEYRRQRVEEYGIHVDQLFFHDPDGFMIEICNC 133          
BLAST of NO29G00650 vs. NCBI_GenBank
Match: XP_010088321.1 (uncharacterized protein LOC21389289 [Morus notabilis] >EXB33937.1 hypothetical protein L484_005835 [Morus notabilis])

HSP 1 Score: 98.2 bits (243), Expect = 4.500e-17
Identity = 58/154 (37.66%), Postives = 87/154 (56.49%), Query Frame = 0
Query:  137 PFPIVSFNHMSREVLDYELSRDFYCGVLGFIEIPRP-AFENEGVWLYGFGLSLHLIKSRYPQKRLLLKGRRIEHFEEALPNVDHMAFITSNLNKVEKQLREHSVFYKRFGSDKTNIH--QIFLFDPDGNVIEIGNC-----APPVGETV--CSR 281
            P  + S NH+S      E S DFY  VLGF  I RP +F+ +G WL+ +G+ +HL++   P+K  L K +RI       P  +H++F   +++ VE++L+E  + Y +   ++  IH  Q+F  DPDG +IEI NC      P  GETV  CS+
Sbjct:    8 PLQLKSLNHISLLCRSLEKSLDFYRSVLGFFPIRRPDSFDFDGAWLFSYGIGIHLLQCEDPEK--LPKIKRIN------PKDNHISFQCESMSTVERKLQEMGIIYVKTRVEEGGIHVDQLFFHDPDGLMIEICNCDNLPVVPLTGETVRSCSK 153          
BLAST of NO29G00650 vs. NCBI_GenBank
Match: XP_002517606.1 (PREDICTED: metallothiol transferase FosB [Ricinus communis] >EEF44770.1 lactoylglutathione lyase, putative [Ricinus communis])

HSP 1 Score: 97.4 bits (241), Expect = 7.700e-17
Identity = 58/154 (37.66%), Postives = 83/154 (53.90%), Query Frame = 0
Query:  137 PFPIVSFNHMSREVLDYELSRDFYCGVLGFIEIPRP-AFENEGVWLYGFGLSLHLIKSRYPQKRLLLKGRRIEHFEEALPNVDHMAFITSNLNKVEKQLREHSVFYKRFGSDKTNIH--QIFLFDPDGNVIEIGNC-----APPVGETV--CSR 281
            P  + S NH+S      E S DFY  VLGF+ I RP +F+ +G WL+GFG+ +HL++S  P+         +    E  P  +H++F   ++  VEK+L+E  + Y R   ++  IH  Q+F  DPDG +IEI NC      P  GE    CSR
Sbjct:    8 PLHLKSLNHISLLCRSVEESIDFYQNVLGFVPIRRPGSFDFDGAWLFGFGIGIHLLQSEDPE--------NMPKKSEINPKDNHISFQCESMGAVEKKLKEMEIKYVRATVEEGGIHVDQLFFHDPDGFMIEICNCDSLPVIPLAGEMARSCSR 153          
BLAST of NO29G00650 vs. NCBI_GenBank
Match: ACF74315.1 (lactoylglutathione lyase [Arachis hypogaea])

HSP 1 Score: 96.3 bits (238), Expect = 1.700e-16
Identity = 56/156 (35.90%), Postives = 84/156 (53.85%), Query Frame = 0
Query:  137 PFPIVSFNHMSREVLDYELSRDFYCGVLGFIEIPRP-AFENEGVWLYGFGLSLHLIKSRYPQKRLLLKGRRIEHFEEALPNVDHMAFITSNLNKVEKQLREHSVFYKRFGSDKTNIH--QIFLFDPDGNVIEIGNC-----APPVGETV--CSRAV 283
            P  + S NH+S      E S DFY  VLGF  I RP +F+ +G WL+GFG+ +HL+++  P+K        +   +E  P  +H++F    +  VEK+L+E  + + R   ++  I   Q+F  DPDG ++EI NC      P VGE    CSR +
Sbjct:    8 PLQLKSLNHISLVCRSVEQSMDFYQNVLGFFPIRRPGSFDFDGAWLFGFGIGIHLLQAEDPEK--------LPKKKEINPKDNHISFQCECMEAVEKKLKEMDINHVRARVEEGGIQVDQLFFHDPDGFMVEICNCECLPVIPLVGEVARSCSRVI 155          
BLAST of NO29G00650 vs. NCBI_GenBank
Match: XP_015938188.1 (uncharacterized protein LOC107463821 [Arachis duranensis])

HSP 1 Score: 96.3 bits (238), Expect = 1.700e-16
Identity = 57/162 (35.19%), Postives = 86/162 (53.09%), Query Frame = 0
Query:  137 PFPIVSFNHMSREVLDYELSRDFYCGVLGFIEIPRP-AFENEGVWLYGFGLSLHLIKSRYPQKRLLLKGRRIEHFEEALPNVDHMAFITSNLNKVEKQLREHSVFYKRFGSDKTNIH--QIFLFDPDGNVIEIGNC-----APPVGETV--CSRAVGLGGPE 289
            P  + S NH+S      E S DFY  VLGF  I RP +F+ +G WL+GFG+ +HL+++  P+K        +   +E  P  +H++F    +  VEK+L+E  + + R   ++  I   Q+F  DPDG ++EI NC      P VGE    CSR +    P+
Sbjct:    8 PLQLKSLNHISLVCRSVEQSMDFYQNVLGFFPIRRPGSFDFDGAWLFGFGIGIHLLQAEDPEK--------LPKKKEINPKDNHISFQCECMEAVEKKLKEMDINHVRARVEEGGIQVDQLFFHDPDGFMVEICNCECLPVIPLVGEVARSCSRVIMTQPPQ 161          
BLAST of NO29G00650 vs. NCBI_GenBank
Match: XP_016177064.1 (uncharacterized protein LOC107619323 [Arachis ipaensis])

HSP 1 Score: 96.3 bits (238), Expect = 1.700e-16
Identity = 57/162 (35.19%), Postives = 86/162 (53.09%), Query Frame = 0
Query:  137 PFPIVSFNHMSREVLDYELSRDFYCGVLGFIEIPRP-AFENEGVWLYGFGLSLHLIKSRYPQKRLLLKGRRIEHFEEALPNVDHMAFITSNLNKVEKQLREHSVFYKRFGSDKTNIH--QIFLFDPDGNVIEIGNC-----APPVGETV--CSRAVGLGGPE 289
            P  + S NH+S      E S DFY  VLGF  I RP +F+ +G WL+GFG+ +HL+++  P+K        +   +E  P  +H++F    +  VEK+L+E  + + R   ++  I   Q+F  DPDG ++EI NC      P VGE    CSR +    P+
Sbjct:    8 PLQLKSLNHISLVCRSVEQSMDFYQNVLGFFPIRRPGSFDFDGAWLFGFGIGIHLLQAEDPEK--------LPKKKEINPKDNHISFQCECMEAVEKKLKEMDINHVRARVEEGGIQVDQLFFHDPDGFMVEICNCECLPVIPLVGEVARSCSRVIMTQPPQ 161          
BLAST of NO29G00650 vs. NCBI_GenBank
Match: XP_017433856.1 (PREDICTED: lactoylglutathione lyase [Vigna angularis] >KOM51252.1 hypothetical protein LR48_Vigan08g207900 [Vigna angularis] >BAT91301.1 hypothetical protein VIGAN_06262000 [Vigna angularis var. angularis])

HSP 1 Score: 95.9 bits (237), Expect = 2.200e-16
Identity = 51/135 (37.78%), Postives = 82/135 (60.74%), Query Frame = 0
Query:  139 PIVSFNHMSREVLDYELSRDFYCGVLGFIEIPRP-AFENEGVWLYGFGLSLHLIKSRYPQKRLLLKGRRIEHFEEALPNVDHMAFITSNLNKVEKQLREHSV-FYKRF--GSDKTNIHQIFLFDPDGNVIEIGNC 270
            P+++ NH+SR   + + S DFY  VLGF++  RP A + EG WL+ +G+ +HL++S+   +RL    + ++      P  +H++F   +L  +EK+L+E +V F KR     D T + QIF  DPDG ++EI NC
Sbjct:   26 PLMALNHVSRLCRNVKESIDFYTKVLGFVQTERPQALDFEGAWLFNYGVGIHLVQSKEEDQRLPSDAQHLD------PQDNHISFQCEDLEAMEKKLKEMNVKFMKRSLEAEDGTKMDQIFFNDPDGFMVEICNC 154          
The following BLAST results are available for this feature:
BLAST of NO29G00650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21285.11.500e-8161.65lactoylglutathione lyase glyoxalase i-like protein... [more]
GAQ82129.13.700e-1942.34lactoylglutathione lyase / glyoxalase [Klebsormidi... [more]
XP_021984333.11.500e-1737.66uncharacterized protein LOC110880080 [Helianthus a... [more]
XP_023761767.13.400e-1739.71uncharacterized protein LOC111910213 [Lactuca sati... [more]
XP_010088321.14.500e-1737.66uncharacterized protein LOC21389289 [Morus notabil... [more]
XP_002517606.17.700e-1737.66PREDICTED: metallothiol transferase FosB [Ricinus ... [more]
ACF74315.11.700e-1635.90lactoylglutathione lyase [Arachis hypogaea][more]
XP_015938188.11.700e-1635.19uncharacterized protein LOC107463821 [Arachis dura... [more]
XP_016177064.11.700e-1635.19uncharacterized protein LOC107619323 [Arachis ipae... [more]
XP_017433856.12.200e-1637.78PREDICTED: lactoylglutathione lyase [Vigna angular... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL061nonsL061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005178NSK005178Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G00650.1NO29G00650.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|532318gene_8237Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100468g2gene9138Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G00650.1NO29G00650.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G00650 ID=NO29G00650|Name=NO29G00650|organism=Nannochloropsis oceanica|type=gene|length=1558bp
ATGGACAAGTCTGGTGGTAGCAGCAGTATCATGGACGGTCCTTCGTCCTA
TTCATCCCCTTCTGGTGCCCTTACTTTTGCCGCCGCTCCCTCCGCGGGCA
ACTTGAACAACGATCACCACGACAACAATATGGTCAAAAAGATGAACTAT
GGACATGGCAAGCACCATTTGCGTCGTCAACTCAACAACCACGCCAACAA
CAATCAAGTCCATCCCAAGCCCCCTCATTCGCCCCCCCGCTACTGTATGT
CCGACATCGTCGCGCACGCTCGACAGCAAGGAGGCCAGGGCCATCAGCTC
GAGCAGCAGCACCAGCACCAGCAGCACCAGCAGCACCAGCAGATGCAGAT
GCAGCAACTACAGCAGCAGCACAACCATGGGCATAGTAAGAACAAGGCCC
CTTATCGTCCGTTTCCGATTGTCAGCTTTAACCACATGTCTCGGGAGGTG
TTGGATTACGAGCTGTCGCGTGATTTTTATTGCGGCGTGCTCGGGTTTAT
TGAAATTCCCCGACCGGCGTTTGAGAACGAGGGTGTCTGGCTCTATGGCT
TCGGCTTGTCGTTGCATCTGATCAAATCGCGCTACCCACAGAAGAGGCTG
TTGCTCAAGGGACGCAGGATTGgtacgtagaggagggagggagtgaggga
aggaggaaaggggggaaagttttcccccctttttgatgtatagtatttcg
gtgtgagtcgtgcgttagcgagtgcctccctggaggatagggatggagaa
atggcgagagttataaagagagaaagaaaggaaaggaattctctctccga
agtctattattaactcacattgccttcctttcctccctcccgtccacgct
ccctccctccctccctccctccctcccgtccacgctccctgccgtcctcc
cttcggtccgtcctccttcccagAGCATTTCGAGGAAGCCTTGCCTAACG
TGGACCACATGGCGTTTATCACCAGCAACCTGAACAAGGTGGAGAAGCAG
CTACGTGAGCATTCGGTCTTCTACAAGCGCTTTGGGAGCGACAAGACCAA
Cgtacgccctctctctctccctccttccattcctcactccctccctacct
acctacctctcttactccctccctccctacctccctccctcccttcctcc
ctcccttcctccctccctgcctgcctccctcccttcctccctcccttcct
gcctccctccttgcctgcctccttccttccttcccgtcacctaggcaccg
tccctccctccctttgtctttgcctgtctgcattcattcctttccatccc
tcactgtggagggtatgacgctctttttttaagcatcgctttttcacagc
ctctccgtgcccgacctcatatctcacgtccttccctccctctttccctc
cctccctctttccctccttccagATCCATCAAATTTTCCTGTTCGACCCG
GACGGAAACGTCATCGAGATCGGCAACTGTGCTCCGCCTGTAGGAGAGAC
GGTATGCTCCCGCGCCGTGGGCTTGGGAGGACCGGAGAGCCCCCATTCAC
GTTTGTAG
back to top

protein sequence of NO29G00650.1

>NO29G00650.1-protein ID=NO29G00650.1-protein|Name=NO29G00650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=295bp
MDKSGGSSSIMDGPSSYSSPSGALTFAAAPSAGNLNNDHHDNNMVKKMNY
GHGKHHLRRQLNNHANNNQVHPKPPHSPPRYCMSDIVAHARQQGGQGHQL
EQQHQHQQHQQHQQMQMQQLQQQHNHGHSKNKAPYRPFPIVSFNHMSREV
LDYELSRDFYCGVLGFIEIPRPAFENEGVWLYGFGLSLHLIKSRYPQKRL
LLKGRRIEHFEEALPNVDHMAFITSNLNKVEKQLREHSVFYKRFGSDKTN
IHQIFLFDPDGNVIEIGNCAPPVGETVCSRAVGLGGPESPHSRL*
back to top
Synonyms
Publications