NO29G00610, NO29G00610 (gene) Nannochloropsis oceanica

Overview
NameNO29G00610
Unique NameNO29G00610
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6424
Alignment locationchr29:230619..237042 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:230619..237042 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO29G00610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL061nonsL061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005170NSK005170Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G00610.1NO29G00610.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673197gene_8234Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G00610.1NO29G00610.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G00610 ID=NO29G00610|Name=NO29G00610|organism=Nannochloropsis oceanica|type=gene|length=6424bp
CTCCTCCTCCTCCTCCTCCTCCTCATTCTCCCCTTCTTTCCCTCCCTTCC
CCCCCACCATCACCAGCACCACCTCCACCATTCCCGCTGCCCCTTCACCT
CCCTCCCTTCCCCCCTCCCTTCTCCCACTTCGCCTTCTCCTCGACCTCCT
CCTCTCCCTCCTCATCACGGAGAAGCCTTCAACCCCTCCCCGAGACTACC
ACGTCATCCGCAACGCATGCCTTCAGTACATCATCCTCTTCTTCGAGCTC
TCCCGCTCGCATGATAAGCTCTTGCGCCACCATGCCTCCGTGCTCCTCAA
Ggtaatccctccctccctccctccttccctccctccgtctccgcctcgtc
gagcccacagacatgacgcccctcatcatacccttttctcccccctcccc
tccccgttatcctcccacagCACCTCCTCCTCGACTGCGACGACCCTATC
CATGCCATGGGTCTACAGCACGCCGCCATCTCCCATGGAGTCCTGCTATG
GCAACTTGATTTATATGCCGCCTCCCTCCTAGGGTTGGGAGAGGACGAGG
GAGAGGAAGAGAGGGAGGGAGGGCATGGGCGGGTGGGAGGACGACAGCAG
AGAGCGGGGAGCTCCCACCCGCCCTTGCGCGGCATCGACAGGCCTGCGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGATGATGTGTCCCCGG
CTCAGCTTCGAGGGGCCTGCCAGGACGTGATTATTTCTTTGTGTCTCCAC
AACAACATGGCCTACCGAGTGATGGCCGCGACATTTCCGGGTCGCATTTT
GTGCATGCGCTGTGCCGCGTGGGAAGAGGGAGAGGTGCGGAGGTTTGTGT
CGGTGGAGGAGGAGGAGGAGGAGGGGGAGGGGGAAGGGGGGAGGGGGAGG
AGGAAAATGTCCAGGAGACAGACAAGGAGGGGGAAAGAAGGAGGGACCAG
CCGCCCCTCATTTTTTCCCTTCCACACTCGTCCCTTGCCCGGCCTCCCCT
CCCTTCCTCACCATCCTACTCCTACGATGAGAGAGCTGTGGTTCGATCCT
ACTTTTCAACCCCCTTCCTCTTCCTCCCTCTCTTCCTCCGCCCCGCCTTC
CTCCTCCTCCTCCTCCTTCTCCTCCTTCTCCGTGTTGGCGAATGCCACCT
CTTCTTTCTTCTCGCGTACCCCACGAACGAACAACCCTCCCTCCCCCTCT
CCTTCCCCCTCTGCCTTGTCCTTTGATGACCGCGAATCTGATTCTGATTC
CTCCTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCTTCTTCTTCCTTTT
CCTCCTCCCTACACGGCCAAAATTGGCATGCCCTCCTCCACTCTCTTCCC
CTCTCGTGGCGAACACCCGAGCTCCTGTGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGACCTACGGGAGCTGTCACGAGGGTTGAAGG
AGGAGGTGGAGAAATTGGACTATATAAGGGAAGAGAAAGGCATTGCCGTG
GCTTGGGACCCGGCGGCTTTCGAGGTGAGGTATGGAGGGAGGTATGGAGG
GAGAGAGGGAGGGAGGGTAGTCGTGGATGGATATGTGGTGGAGTTGTTGG
TGGAGGCGTTGAGGAAGCACCCCCTTCCTCCCCCCCGCCCTCCCGCACTA
CCTTCTCCTCTTCCTCCTCCTCCTCCTTTGGCTGGGAGGCAAGGCGGTGC
CATTTTGAAGACCGTGACAAGGGAGGGGGGGAGGGAGGGGGGCAGAGAGG
GAGGGAGGAAGAGAAGGGTGAGGATGCTGACGGTCATGAAGCAGTGGCAA
CGACAGCAACGGCGACGCCCTCCCCCTCTTCCTCCCCTCTCGGCCCCGCA
CGACGCGGCGCGCCTTTTCCTGCACCTTTTGGACCGGGTCGTTGCGTGTG
GTGATGAGGAGGGAAGGGGGGAGGGAGGACGAGCACGAGGGAGGGAGGGA
GAAAAGGTGGTGTGTGTGGAGGCCATGCGATTGTTGTTAAGGAGGCATCA
GGAAGAGGTCGGGAGTTTGACGCCGGTTCGATTCATCCTGAGAGAAATCG
AGAGGGCGGTGAGGAGGGGGGAAGAGGAGGAGGAGGAGGAAGGGGAGGCG
CGAGGGAGGGAGGGAGGAAGGGAAGGAAGGAGGGCGGGGGGGTTGCTTAC
GGATCCCTACCTTCGAGAACTCCTCTTGCTTCTTCTAACCACGTTTGAGA
ATACCTCCTCCTGTCCCTCCTCCTGTCCCTCCTCCTGTCCCTCCTCCTCA
TCACCCTCCTCCTTCGGTCTCTCTCGGCGTGACCACCGGCAGCATTCTCC
TCTTTCTGACCTCACCAGGGCATTGGTGAAGCAGGGCGGGATAACCGTAT
TAACAAACACGTATTTTCATGCCTTGTCCCTCCTGCTCCAGCAGCAGCAG
CAGCAGCAGCAGGAAGAGGAGGATGAGGAGGAGAAGGAGGAAACGGAGAC
AGGTGCTGAAGGGAAAGAGGAAGTCGATGAAGAGGACGAAAAAGGTTCTG
CCGTTACCATGGAGGGAAGGAAAGGACGGAGGGAGGGAAGGAAGGAGGGA
GGGAGGGGCCAGTGCTTCCATGACTATTCGAGCCATTCCTTGTTTGCGAT
CATTCTACGATTGATTGAGGCGATGACGCACCATACACCGGTAGTGGTCC
AGGCGCTCTTTGGAGAGGACAAGAAAAAACATCAACAGCAACAGCAACAG
CAGCAGCAGCAGTGGCAACAGCATGAGGAGGAGGGGGAGAAGCAGTCGCG
GCCGTTCTCACCTGTTATCCCTCGCCTCGTTGCTTCCCTGTCCATGCTTG
CTGGGCACCACCCTTCCTCCCTCCCTTCCTCCCCTTCGTCCTCCTCCCCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCCTTCGA
CGACCTCGGCGTCACCTCGCTCCTCCGCCTCCTTCTCCGCTCCATGTCGC
TCGACCCCTCCCTCCGCCCCTCCCTCCTTCACGCCCTTATCATCCCTCAC
CTCCTCCTCGCCTCTTTCACCCCATCAGGTAGCGGCCGACTCCAACCTGA
AGGCCTTATCCTCCTCAAAACCCTGTCCCTCCCCCTTCCTCCCTCCCTCC
CTCCCTCCCCCTCCCCGCTCTCCTCATTCCTCCCTCCTCAGCTCATCCGC
CTCCTCCTCCTCCTCGAGCCTACCGTCAGTGGGGATCCTTCCTCCCTCCC
TTCCTCCCTTCCTTCCTCCTCCATGATCACCCTCTCCCTCCTCCTCCCCC
TTTTAAACGCCTCAACGGGCACGCAACGGCCGGACCTCATCTGGCTACCC
CGTCACCGTGCTGCTTGTTTTAAGTATGCCTGGCAGGCAGTTTATGGGAG
GGAGGGAGGGAAGGAGGGAAGGAAGGGAGGGGGCGACGCCGCAGTGTGTG
TGGTCGACTTGAAAAAGGGAGGGAGGGAGGTAGAGGTGGGAGGGTGGGAG
GGAGGAAGGGAAGCAGAGGCGGTGTACCCGGACCTTGAGGCCCTGCCTCA
GGTGCAGGGAGTTTACTTACAAGAGTTTCTCGCGGCTGCAGCGGCAGGAC
TGGCACGCAAAGAAAGGAGGAAAGACGCGGAGGAGGGAGGCGGGGAGGGA
GGGAGGGGAAAGGGCTTTGTGCACCCCTTCCTCCCCTCGGCGGCACAAAA
TTTCCTCCTCAATCTTCTGAGTGCCCTCTCCCGCCTCCTGAGACAACACC
GCTCCCCTCCCTCCCTCCCTCCCTCGTGCTCCTCCTCCTCTTCGTCCACC
TCACCCGGCCGTCTCCGCCGCGCCTGCTCCCAACCCCCATTCGCTTCCTC
CCTTCCCCCCCTCCCTTCGGCCCTCCTCCTCCTGCAGTGCATCCACCACA
TCCTCCTCCTCTACCCACCCCACCCCAACATATGGGAGTCTGTGGGCGTG
GCTTCCCTCGCTGCCAGCCTGGACTGGTCTCTCACGATTTTGGCCAGCAG
GCCTTCCTCCCTCCCTTCCTCCTCCTCCTCCCCTCCCTCTTCCCCTCCTC
CCTCCCCACCCTCGGTCAGTGGGGAGGAAGGCAACAAGGAAGATAGAAGA
AGGGAGGGTGGGAGGGAGGAAGAGGCGGAGAGGGAACCGCTCCATTTCCG
TTTTTTCGGGGAAGCGATGGCGATCCTTTTGAAGGTCATCTCTCCTCCAA
CCCCCCCTCCCTCCACCCCTCCCTCCACCCCTCCCTCCCGCCCCTTCTCC
CCCCCTTCCTCCTCGGCGGAACCATGTGCTTTCAAGTTTTTGGCCCATGG
CGGCCTTAGCCTTCTCTACCAGGTGGCCCGGCTGTCCGTCACTGCCTTAC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCATCAAGTCCTAACCTCCGCCCTCCTCCTTGCCCTCCTCACGTTCAA
ACATGCCGGTGGCGCTGCTGCTGCTGTTGCTACCATTACCACTACTTCTG
CGATTGCTTTCTCTTCTTCTTTCTCCTCAACAGCAGCACCAGCAGCACCA
GCAGCAATAGCGGCAACAGCAGCAACAGCAGCAGCAACTACCGCTCCTCC
TTCACCCTCTCCAGCACGCTCGCTCTCCTCCTCGTTCTCCTTCTCCTCCT
CTTCCTCCTCCCCTGCCACTCTCAAAGAAAAAGAGAACAAGGACGAAAAC
ATTAACGGCAGCAGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGTGCGCG
TGCCCTCCTCCGCCTCGTCCTCCTCAATCTTCTCGTCGGTCCCGAGAGAA
GGGAGGGCGGGCGGGGGGGAGGGGCCATCATCCATGGAGGGACGGCGCTT
GTGGGGCTATTGTTGATAGGAGAATTGATTTCAGAAAGCGAGGCCTTACG
CCGCGTGTTTGTCGAATTAGGGGGCTTACCTGTCCTCTTCTACTTCCTCT
TTCAATCCATCCGCCGTGCTGGTGGAGCGGAACAGTTCCTTCCTCTCCCT
CCCTCCCTCACGTCCTCCTCCTTTGCCCCCTTGCAGGGTTCAGGTGGTGG
CGGAGGAGGAGGACGAAGAAGGCAGGATGCAGTGCAGCAGCGCCTCCTCC
CTCTTCTCCTCGAACTGCACTTGATGGTGGGCTCAAAACTGGCAGACCCA
TGTCCAGGCTGCTTCCTCGTCCCTTCCTCCCCCCCTTCCTCCCCTGCGCC
GTGCTGCCTCCTCCTCAACCAGCACCTGGCCTTGCAGACCCTCCACATTC
TCTCTCTCCTCCCCACTACCCCTCCCTCCCTCCCTCCCTCCTCCTCCTTC
TCCTCCCTCGCGTCCTCCCTGCACCTCGCCCTTGCCCAATCCTTTACTCC
TGGCCTGCTTTCGCTTCTTCTCTCCTCCCCCTCCGCCGGCCCTCTCCTCT
TCTTTCCTCCCTTTCTCACCCCTACCTCGCTGCGTCGCCCTTGGCTAGTT
TGGAGCCCTGCGCTGAGAGAGGAGATGGAGGGATGGGTGGAGGAGGAGGT
GGAGGCGGTGAGGAGCGGAGAGAGGGAACGTGCGCGGTGGCCGCTCTGGT
CGCTGCAGGCTTTCCTGAAGGAAGGGGGTTGTGTCGGTCAGTATGAGAAG
GGATTGAAGGGGGAACTGGTGGTAGAAGGTGTTTTTGTCAAGGTGGTGGT
GGAGGGAGGGAGGGAAGGAGGGGTCATGGACTTGGGGCCGGAAGGACTGG
GAGGAGGGAGGGAGGGAGGAAGGGTGGGGAAGATTTTGGAGGGGTTGGAG
ATCTCGATTCAGTCATCCAAGAATGTATTGCAGCATCTGTCGTTGGTCTG
CGGAGAGGCCAGAGGGAGGGAGGAAGACGTGGAAGTAAGGCGGGAGATTG
AGGCTTTGAGGGTGGAGGCGGAAAAGGGCCTGAGAGAGAAAGAGGAAGCG
CTGGAGGTGTTGTTACAGAAGTTTCCTTCTTTTGCCTGGAGGAGAAATCG
TTTGTTGGGGGGTGCGAGCAGGAGGAAGTAGGGGAGGTAGAGGGAGGGAG
GGGATTGAGGGTGTAGCGATATTTAATGCACGCCTTTTTGTCGGCGCCTT
AGCTACAAGGAGGCCGTTGAGGATGGTCGCTTTCATTCGACACAATCCTT
CTGTACTCTAGTACCCCCATTCTGTGGCATGAACATTAAGCTACACGGTC
TTGTGTGGATATTCATTCACCACACGTGTAGAAGTCGTACATATACGGGT
AGAATGCTGATGCGCCACATTCCATGTCCCTTGGACACCTGTGTCAATGT
TTCCTGATGCCAAAATTAGAGACACATCCAAGGGAGAGACGTGAAGCAAG
CAGATAAAGATGCAATTTAATATAGAACAAAGCCTGACAGCCCAAAGTAT
TAGAACGCTGGATCCAAAATTCTAACCAAGAATAACAGCAAGTCAAAACA
AGTACAAATCAATGTAATACAGAACAGTCATAAGTACAGTATCATGCATT
TTAAAGAAAAAACTTCACTCATAA
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protein sequence of NO29G00610.1

>NO29G00610.1-protein ID=NO29G00610.1-protein|Name=NO29G00610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1825bp
MGLQHAAISHGVLLWQLDLYAASLLGLGEDEGEEEREGGHGRVGGRQQRA
GSSHPPLRGIDRPAEGGREGGREGGRDDVSPAQLRGACQDVIISLCLHNN
MAYRVMAATFPGRILCMRCAAWEEGEVRRFVSVEEEEEEGEGEGGRGRRK
MSRRQTRRGKEGGTSRPSFFPFHTRPLPGLPSLPHHPTPTMRELWFDPTF
QPPSSSSLSSSAPPSSSSSSFSSFSVLANATSSFFSRTPRTNNPPSPSPS
PSALSFDDRESDSDSSSSSSSSSSSSSSSSFSSSLHGQNWHALLHSLPLS
WRTPELLWEGGREGGREGGREDLRELSRGLKEEVEKLDYIREEKGIAVAW
DPAAFEVRYGGRYGGREGGRVVVDGYVVELLVEALRKHPLPPPRPPALPS
PLPPPPPLAGRQGGAILKTVTREGGREGGREGGRKRRVRMLTVMKQWQRQ
QRRRPPPLPPLSAPHDAARLFLHLLDRVVACGDEEGRGEGGRARGREGEK
VVCVEAMRLLLRRHQEEVGSLTPVRFILREIERAVRRGEEEEEEEGEARG
REGGREGRRAGGLLTDPYLRELLLLLLTTFENTSSCPSSCPSSCPSSSSP
SSFGLSRRDHRQHSPLSDLTRALVKQGGITVLTNTYFHALSLLLQQQQQQ
QQEEEDEEEKEETETGAEGKEEVDEEDEKGSAVTMEGRKGRREGRKEGGR
GQCFHDYSSHSLFAIILRLIEAMTHHTPVVVQALFGEDKKKHQQQQQQQQ
QQWQQHEEEGEKQSRPFSPVIPRLVASLSMLAGHHPSSLPSSPSSSSPSS
SSSSSSSSSSSSPFDDLGVTSLLRLLLRSMSLDPSLRPSLLHALIIPHLL
LASFTPSGSGRLQPEGLILLKTLSLPLPPSLPPSPSPLSSFLPPQLIRLL
LLLEPTVSGDPSSLPSSLPSSSMITLSLLLPLLNASTGTQRPDLIWLPRH
RAACFKYAWQAVYGREGGKEGRKGGGDAAVCVVDLKKGGREVEVGGWEGG
REAEAVYPDLEALPQVQGVYLQEFLAAAAAGLARKERRKDAEEGGGEGGR
GKGFVHPFLPSAAQNFLLNLLSALSRLLRQHRSPPSLPPSCSSSSSSTSP
GRLRRACSQPPFASSLPPLPSALLLLQCIHHILLLYPPHPNIWESVGVAS
LAASLDWSLTILASRPSSLPSSSSSPPSSPPPSPPSVSGEEGNKEDRRRE
GGREEEAEREPLHFRFFGEAMAILLKVISPPTPPPSTPPSTPPSRPFSPP
SSSAEPCAFKFLAHGGLSLLYQVARLSVTALQQQQQQQQQQQQQQQQQQH
QVLTSALLLALLTFKHAGGAAAAVATITTTSAIAFSSSFSSTAAPAAPAA
IAATAATAAATTAPPSPSPARSLSSSFSFSSSSSSPATLKEKENKDENIN
GSSSSSSSSSSSSARALLRLVLLNLLVGPERREGGRGGGAIIHGGTALVG
LLLIGELISESEALRRVFVELGGLPVLFYFLFQSIRRAGGAEQFLPLPPS
LTSSSFAPLQGSGGGGGGGRRRQDAVQQRLLPLLLELHLMVGSKLADPCP
GCFLVPSSPPSSPAPCCLLLNQHLALQTLHILSLLPTTPPSLPPSSSFSS
LASSLHLALAQSFTPGLLSLLLSSPSAGPLLFFPPFLTPTSLRRPWLVWS
PALREEMEGWVEEEVEAVRSGERERARWPLWSLQAFLKEGGCVGQYEKGL
KGELVVEGVFVKVVVEGGREGGVMDLGPEGLGGGREGGRVGKILEGLEIS
IQSSKNVLQHLSLVCGEARGREEDVEVRREIEALRVEAEKGLREKEEALE
VLLQKFPSFAWRRNRLLGGASRRK*
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Synonyms
Publications