NO29G00590, NO29G00590 (gene) Nannochloropsis oceanica

Overview
NameNO29G00590
Unique NameNO29G00590
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4363
Alignment locationchr29:223869..228231 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:223869..228231 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO29G00590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL061nonsL061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G00590.1NO29G00590.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G00590.1NO29G00590.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G00590 ID=NO29G00590|Name=NO29G00590|organism=Nannochloropsis oceanica|type=gene|length=4363bp
GGGAGGGAGGGAGGGGGAGAAGAAGGGGACGGGAGACAAGGGAGGGGATG
AGGGGGATGAGGAGAGATCGAAGGGGATGTGAGGGTTAATGTACCCTTAT
CTACTCAGTAGTATCAAAAAAACGCGACTTCGGGCATAATTATTTTGAAA
CAGGTCGGATCATTTTTTTGAACGACTTACTACGGTCGAGGATGGGCATA
GGTGTGTAATCGCCGTGCAAGCCCCCAGATGACTCGAATACATAAGACCT
GATCGTCCTATCCATGGAAGTGTGGTGCTCTGCACAGTACTTTGTCGGCT
TGCTTACGTGCCTTAAGAAAACCTCCCGGGGTGCTTGCTGCACACACACA
AGAAACGTGTGAAGTCAGCTCAGCTCATCTTGTAAAACTGAAGGTCACCT
TGGACGACACGTCTCGCCAAACGAAGACAACTTGTGCCTGCCATTCTGTC
CAGCACTCCTGTTGGTGCTGATGCTGGTGGCGAATGATGATGTGAGGAGC
AACGTTCACCTTCTTCTTCGCCTCCCTCTTCCCAACCACCACACATGCAA
CACAGACAGGCAGAGAAAGCACTATGTAACAGGGGACACGACGTGACACA
TCTCACCCTCATTTCCCGCGACTTGCAGCAATGTCCCTCCCTCCCTGTCC
TCTCCTTTCCTTCTCACCCCCTCCACAACACTGTTATCCCGTCACATCCA
ACTCGAACAGGCCCCAAGCACGCAGGCCAAGCCAGCGCTATGGCTCCTCC
ACCAGGACGCCGGGACAGTGCTGGCAGTAGGTACGATCCCCTAGACGCCA
AGCGACATCGCTCCCGATCCTTCTCCCGCTCTCGCTCCTCCCATCGGCGC
TCCTCTCATCGGCGCTCGCCCTCCGCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCTTCCTCTTCCTCCTCCTCCTCCTCCTCCTCTGCCTCCG
TCTCCATCTCTGCCTCTTCTTCATCTTCTTTTGCGTCTTCCTCCCGGGAC
ACGCGCGGGAGAAGCCGACCAAATCGAAGTCATGGCCGCAATCTTTCGCA
TCATCAGCAGCTTCACCCACAGCATTATAGGCATGAGCAGCAGCAGCAGC
AGCAGCGGCAGAGGCAGCTTGATCGAAGCCGTGAAAGGGACGGGGGTGGA
ACTCGAGGACGTTCTTCTTTTCGTACTGCTGCCGCTGCTCCTGCTGCTGT
CGCAGCTGCTGCTCCTTCTCGTCCTCTTTCCTCTTCTTCCTCCTCGTTTT
CCCGCGGTGGACTAGGAGGAGGTGGAGGAGGAAGAGGGGGAGGAAATGAA
GCAAGGGAGGGTCGAGGGAGAGGCAGGGAAGAAGGAGGAAGTGCGAGGAG
CAGGAGCCGCCCGAGGGAGGGGAGGAAGAGGAGTCGCTCCCCAGCGTCTC
GTTCTTGCTCTCCTCCTCATCTGTCGAGTCGGATCCGTCGTGACAGTGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAGGAAGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAAGGAGGAGTGATGGAGGAGGGAGAA
CGGTACGAGATCGGAGCAGTGATGGAGGACGGGAGGGAGAAAGGGGGGGC
GGAAAGGGGGAAAGGTCCAGTGAGAGACAGGGAGATGAGAATCGGAGATG
GAGCAGCACAACTGCTGCTGCTCCTGCTCCTGCTCCTGCTCCTGCTGAGC
GTGATGCTTCCACGGGTGACTTTAAACACAGACGCGGAGCTCGCTCGTCC
TCCCCCTCCTCCTCGCCCTCCCCCTCATCCTCCCGTCGGCGCCGGACGGC
CTCCTCCTCCTCGCGCTCGCGGGAAGCGTCTTTGTTGCGAGAGAATGGAG
GAGAAAGGGAGGGAAGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGAAGAC
GGACGACGACGGATGTCGCGGAGTGCAAGTCGAGAGAACCCAGCGAGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAAGAAAGAATGGCACCGGC
GGAGGTCACCAAGTGGTGGCCATGACTGGGGTAGGGGTGGGAGGGAGGAA
GGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAAAGCTC
GCAGGAAGCTCCACGACGGCGCTCCTGGAGTATGAGCAGAGATCGAGGCA
GAGGACGAGAGGGAGGGCGGGAGGGAGGGAGCGAGGGATTGAGAGGTGTA
CCCCGACGCCGCTCTCGTAGTGGCGCGCGAGGCGGGGCAGGGAGGGAGGG
AGGGAGGGAAGGAAGGAAGGAGGGTGGGAAGGTCGGGCATCGAAGCACCA
GTCGAGAACGAGAAGGAGGAAGCGGAAGAGGAACCGATGGAGGGAGGGAG
GGAGGGAGGGAGGCTCCAAGGCGTCGCTCCCGGAGTGAGAGCCGAGATCG
AGGATTTGAACGGGAAGGAGGAAGGGAGAGAGAGAGGGAAGGAGGGCAAG
GAACATTGGGAAGGGTATCTTCCCATAGGGACAAGAGCCATGGGCGTGAA
GGAGGAGGAGGAAGGGAAGGGGGGAGGGAGGGAGGGAGGGATGGAGGGAG
GGATGGAGGACGGATGGGCGGAAGCACGGGGAGTGGTACTTTGGGGGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGATGGGGACT
ATGCTGCCTTTGTCCTTGCACCGAGAACAGCAGTACCACCATAATCATCA
CCACCAGCGACAGCAGGAGCAGCAGCAGCAGCAGCGGCAGGGAGAAGGTG
GGAGCAGTGCCGGAAGGTCAAGATCTACTACTACTGCTGCTACTGTTCCT
CCTCCTCGTCCTCCTCCTCCTTTTCTCAACAGCAGCGGTGGTGGTCAAGA
TTACGGTGCTCTGGCCATGTCGTCTGAGGACGAGAGCGAGGAAGGGAGGG
AGGGAGGGAGGGAGGACCGTCGTCGAGGAGGAGGAGGAGGCGGCAGCGGA
GGGAGGGAGGGAAGGAAGGAGGGAGGAAGGGATGGGGGGAGGGAGGGAGG
GGGGCACCGCTCGCGCAGTCGCAGTCCCCCTGCCAGAGGAGGGGTGGATG
TCCGACCTGTTTTGCAGCCGTCGCACCAACAGTTATTGCAGCAGCAGCAG
CAGCAGCAGAAAGGAGGAGGACTGCCAAGGGGAACTCCTCTTCCTCCTTC
CTTCCTCGCGTCCAACTCCTTCTTTCAAGCAACCCCCGCTTCTGGAGGTG
GGCGAGGAGCAGGAGCAGGAGCAGGAGGAGCAGGAGGAGGGCTCCGGCAC
CCGCACCTCTTTAATGGTCGATCTATCCTCCGTCCCCGCTCCCAAGAGCG
CCCTCTACCATTCTACCCCCCCGGCGTCCCTGCCGCCCCTCCTCCCTCCC
TCCCTCCCCCCCCTCCTCCCTCTGGGTCCTTTGCAGTTGCTCTGTCCCTC
TCTGCCGCCACTCCCGCCTCCTCCTCCTCTTTTCCTTCATCTTCCTCGCC
TTACACTGCACCTCGTCATCCGGCCTCAATCCCCCCTTCCTCTCTCTCTT
CCTCCGTCCCTCTCTCTCGCTTGGCACCCGTAGGGGGTGGCGCGAACGCT
AGTAGCAATAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTGGTGGCATGAA
TGGAAGGCGGGAAAGAGGAAGGGAAGGAGAGAAGGAAGGAGGGGAAGAGA
GGGTCGACGACGGCAAGGAAAGGAAAGAGGATGCGTACCAGCATCGAAGG
GAGGGAGACGAGGAGGGAGGAAAAGGTGGAGGGGTGTCTCCCCTCCTTCA
TCTCGGCTCTACTACTGCTACCCCTGCTCCTGCTGCTCCCTTACGCACTC
CCCTTTCTCTCCCACCCCTGCCGATGAATCCGGCTGAACGCGCCTTGTAC
GAGGCAGAGCTGAAGGTGGCGGCGAGAAAGGAGGGGAGAGAGAGGGCGTT
GCATGAGTACCAGCAGGCATGCATCGCTGTGGAAGGGAATGGGAGCCGTA
TGGCTTTTGTGAAAGGGAGGACCTTCTTGTGGGGGGTGGAGCCCGCGGGG
GGAGGGAGGGAGGGAGGGATGCATGAGAAGGTGCGATCGACGGGGTCGAT
AGAGGGGCTATTTGGCTCGTCAGTGGGTTCATTATCGTCCTTGGAGGGAG
GAGGAGGAGGGATGGAGGGAGGACTAGTAGGAGGGGGCGGGGGGGGAGGG
CGGAGGGGGAGAGCGGTGTTCAATGATTGGTGAAAGGGAGAGGGAGGGAA
GAAATAAGGGGAAAAGTAGACAGAAGATATTCATGTGAATTTAAGTTTGT
CCTTTGTTAGGAAGGCAGTAGAATGAATCTAGTGGAATATTATTCGCCAA
TTCGCTGAAATCACGGTGTTGCATTTATTTGGCCCGGCACGTAAAATCTC
GTCCCAGTGTAAG
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protein sequence of NO29G00590.1

>NO29G00590.1-protein ID=NO29G00590.1-protein|Name=NO29G00590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1213bp
MQHRQAEKALCNRGHDVTHLTLISRDLQQCPSLPVLSFPSHPLHNTVIPS
HPTRTGPKHAGQASAMAPPPGRRDSAGSRYDPLDAKRHRSRSFSRSRSSH
RRSSHRRSPSASSSSSSSSSSSSSSSSSSSSSSASVSISASSSSSFASSS
RDTRGRSRPNRSHGRNLSHHQQLHPQHYRHEQQQQQQRQRQLDRSRERDG
GGTRGRSSFRTAAAAPAAVAAAAPSRPLSSSSSSFSRGGLGGGGGGRGGG
NEAREGRGRGREEGGSARSRSRPREGRKRSRSPASRSCSPPHLSSRIRRD
SGGGGGGGGGGGGGGGRGGGGGGGGGGRRSDGGGRTVRDRSSDGGREGER
GGGKGERSSERQGDENRRWSSTTAAAPAPAPAPAERDASTGDFKHRRGAR
SSSPSSSPSPSSSRRRRTASSSSRSREASLLRENGGEREGRREGRREGRR
EDGRRRMSRSASRENPARREGGREGGREGKKEWHRRRSPSGGHDWGRGGR
EEGREEGREEGREGGRESSQEAPRRRSWSMSRDRGRGREGGREGGSEGLR
GVPRRRSRSGARGGAGREGGREGRKEGGKVGHRSTSREREGGSGRGTDGG
REGGREAPRRRSRSESRDRGFEREGGREREREGGQGTLGRVSSHRDKSHG
REGGGGREGGREGGRDGGRDGGRMGGSTGSGTLGGGGGGGGGGGGGGGGM
GTMLPLSLHREQQYHHNHHHQRQQEQQQQQRQGEGGSSAGRSRSTTTAAT
VPPPRPPPPFLNSSGGGQDYGALAMSSEDESEEGREGGREDRRRGGGGGG
SGGREGRKEGGRDGGREGGGHRSRSRSPPARGGVDVRPVLQPSHQQLLQQ
QQQQQKGGGLPRGTPLPPSFLASNSFFQATPASGGGRGAGAGAGGAGGGL
RHPHLFNGRSILRPRSQERPLPFYPPGVPAAPPPSLPPPPPPSGSFAVAL
SLSAATPASSSSFPSSSSPYTAPRHPASIPPSSLSSSVPLSRLAPVGGGA
NASSNSSSSSSSSSSGGMNGRRERGREGEKEGGEERVDDGKERKEDAYQH
RREGDEEGGKGGGVSPLLHLGSTTATPAPAAPLRTPLSLPPLPMNPAERA
LYEAELKVAARKEGRERALHEYQQACIAVEGNGSRMAFVKGRTFLWGVEP
AGGGREGGMHEKVRSTGSIEGLFGSSVGSLSSLEGGGGGMEGGLVGGGGG
GGRRGRAVFNDW*
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Synonyms
Publications