NO29G00570, NO29G00570 (gene) Nannochloropsis oceanica

Overview
NameNO29G00570
Unique NameNO29G00570
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3185
Alignment locationchr29:218152..221336 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:218152..221336 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO29G00570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL063nonsL063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL061nonsL061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G00570.1NO29G00570.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G00570.1NO29G00570.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G00570 ID=NO29G00570|Name=NO29G00570|organism=Nannochloropsis oceanica|type=gene|length=3185bp
CAATAATTAACCCAGCCGCTCTCTCCAATCTTACTCTCCATACAAATGGA
CACAATTAAGACGAAGTCGCAATGACATCGCCACCCCAAGCGACGCTTGT
TGCATTGTCTCTGCCCCATTCTTTCGCGATTTGTCTGTGTGTTAATGTGT
GTGCGACATGCTGATTTGCCTCTCCCTCTCCTCCTACATCTTCACATACA
GGGACACGGCCGCACCAGCAGCGCCTAACGAAATAACAGCAACCACATTC
ACCTCCACCCTCAGGGCACCATGAGCGGTCAGAATGAGCTCCATAACTGC
ATGCCTGGCATCGACGGgtaagtccaagctgaacaaccccgacacgctat
cccctccttcccaccctcccccctgcgtgggtgtcgctgccactccgccc
gcatctccaacagcacaagcagcagataccctggacccgtattgggcaag
ccactacgttgcatcctctccccactctgttctgtaccccttccggtgtg
cgtgtatgttgcccaacctcacactctacaccactgccctcccctctacc
tgccacccccacccaccttctccctccctatagacctccaaaaccgctgc
tgctacagctgtcgatccacacacccgccaaacatctcattccccctaca
ttcctccataggtaaacgcaaaggtaccctcaactctcaccttccctcca
ccatctgatctcttccagTCACAGGAACAACATTAAGACCACCACCACCA
GCAGCAGCAGCAGCAGCGGCGGCAGCAGCAACAGCAGCAACAGCAACCGC
AGTAACAGCACCAGCAGAAATAACAACAAAGATTATATCAGTAGTAGTTG
CAACAGCAGCAGCAGCAGTGGTAGTAGTTGCCGCATTAGCATCAGCGGCA
GTAGTAGTAGTAGTTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAC
AGCAGCAGCAGCAGCAGCAGCAACACTTATGGTAGCTTGGCCTACCAACA
ACAGCCATTAATTGAACCCTGTCTGGTGACAACGGAAGGGACGAGAGAAT
CAATAGAAGGGGGGGGGAAATCGGTAACAACAGCAGTCGCAGAAACCGCC
ATTTTTCGAGCTATTGCTTCAGGGATGACCTTCGAGGGGTTCACCTCACG
TATTTCAAAGGTTAAAAAGCTTCTGGAAGTTTACCACGCCTCCCTCGCCA
CCGACACGCCTCTCCGCCCTCCTCTACATTACGATTTCCTCCAAGCTCTA
GTCAAGAGCTATCACCTGAAGTCCGTGGTCGATGCATCCCCTCCCTCATC
TCCCTCCTCCCCATTCGCCTCCATGTCCATATCGTCAAAGATCTCGGTCG
ATCTGCACACTCCAAGCACCGTCAGGCCCGCCTCCTTCTACTCCATCCCC
TCTTTCGATTCCTACGCATCTGGCGGCAGCTCACCTTCCACTCCCCTTCC
TGCCACGAGGAGGACGCATCCCTCGTTTCTCTTTCCCCTTCCTCGTTGTT
TATTGCAACCGCTGTCACAGCGGACCTCGGCTGTGAAAGAGTTGCCTATC
TTGGCACACAATGCTCACAGTTACAGCTGTAGCATCAGCAGCAGCAGCAG
CATCAGCAGCAGCAGCAGTGGCGGCGGCAGCGGCAGCAACAAGTATAGCG
GTGGACACACCATCGTCCCCCCTCTTTCACCAATCTCATCACCGCAGCAG
TATCATCACCAACCCCATTACCACCACCACAACCAGCAGCAGCAGGTACC
GCACGATTGTTTCTCGCTGTTGCAGTGGCAACCTGAGCTCCTTCCTCTCC
ACTCTTCCCCTCTTCCTCCTCCTCCTCCCTGCTCCCCTCCCTTCACCGAC
GCCACCGACATTACTACCGAGGAGAGACCTCCCCAATGGCTTCTCGAGCT
GATACAAGACTTTCCCAGCATGTCCCAAGGGTACTTGGAGGAAATGTGCA
GGAAGTATTTTGCTCGGGCGGGGACGGGAAGGGTAGTGTCGGTGGCAGGG
CTGATGCCTTGGGTACGAGAACAGATTCGCCAAAAGGAGGCCAAGGCAGT
TCGGAAGGCGCGAGCAATGGCGAGGAGGAAGGAGAGGAGGGAGAGAGGCG
CGGCAGAGAGAAAGGAGAAGACGATAAGGGAGAAGGAAGCAGTAGAAACT
ACGGCAATCGCTGCTGCTGCCACCCCTGATGCTTTAGATTGCGAGCAGAT
CCCGGTCGAGGAGAAGGACAAAGAGGTTATTATGGCGGATGTGATCTGTA
CTCCGCCTAGCCCGATGCAAGACCAGCATCATCAGGAAGAGCAGAAGGAG
CAGCTGCGACCACTTATACTTAATTCTCCGGAGGAGCAACAGCTTCCTGA
CCTCCTTCCCCTCCCTCCTGAATCCCCCTCTCCTCATTCGTTCGTGAGAA
AGCAGTTGGAAGAGATTGCGGTCCGGTTCGAACAGCGGCGCGCTAATGCG
ATTGCAGTTAAGGCCTCTCGCGACAATCGCAGCAGCGGTAGCGGCAGCGA
TAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCAGCGGCAGCAGTGGGA
GGAGCAGCGGTGTTCTCAATGTTTCATGTGGTAGTGGTGGAAAAGCAGCA
GGAAGAACACTACCACTGGAACTTCAAGGAAGTAGAGGAGGAGGAGGAGG
AGGAGGAAGGGGAGGAAAAGAAGGAATACTAGGGAGAGGGGGGCTGGGAG
CGAGAAAGCGCAAGAGCGCGGGGGATGAAGGGGGAAACGGGGGAATGCAC
AAAAAGGCTCGTGCGAGCGTACGCGTGCCTAGTAGTTTATGCACTCGCAA
GCGTATGGCGGAGAGAGACGCGAAGGTTGAGGGAAGGGAGAAAGGAGGGT
TGGAGGAGCAACGGCAGAAGCGAGCACGCTCTGTTCTTGTAGAGGAGGGT
CAGGGAGGAGGGATAGGCATGGAGATGGAGGCGGTGACCGCCTCTCTTTT
TTCGGCGGCGGACATTGCGCTCTTCAGGCAGATGATGGGGGTGGAGGGAG
AAGTGGTGGGAGGGGTCGAGTCAGAGATAGAGGCCATCGCAAAGGAGGAG
AAAAGGAAGAAGGAGGCGATGGATGGGGTGTCTGCTAATCCCACTGCTGC
TGATGATGATAAGAATATATCTCCCATGGCGGTGGCTGAATGGAGGTCGA
GGAGGGGTTTGTCTCGTATCAAATTATGGATTTGA
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protein sequence of NO29G00570.1

>NO29G00570.1-protein ID=NO29G00570.1-protein|Name=NO29G00570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=838bp
MSGQNELHNCMPGIDGHRNNIKTTTTSSSSSSGGSSNSSNSNRSNSTSRN
NNKDYISSSCNSSSSSGSSCRISISGSSSSSCSSSSSSSSSSNSSSSSSS
NTYGSLAYQQQPLIEPCLVTTEGTRESIEGGGKSVTTAVAETAIFRAIAS
GMTFEGFTSRISKVKKLLEVYHASLATDTPLRPPLHYDFLQALVKSYHLK
SVVDASPPSSPSSPFASMSISSKISVDLHTPSTVRPASFYSIPSFDSYAS
GGSSPSTPLPATRRTHPSFLFPLPRCLLQPLSQRTSAVKELPILAHNAHS
YSCSISSSSSISSSSSGGGSGSNKYSGGHTIVPPLSPISSPQQYHHQPHY
HHHNQQQQVPHDCFSLLQWQPELLPLHSSPLPPPPPCSPPFTDATDITTE
ERPPQWLLELIQDFPSMSQGYLEEMCRKYFARAGTGRVVSVAGLMPWVRE
QIRQKEAKAVRKARAMARRKERRERGAAERKEKTIREKEAVETTAIAAAA
TPDALDCEQIPVEEKDKEVIMADVICTPPSPMQDQHHQEEQKEQLRPLIL
NSPEEQQLPDLLPLPPESPSPHSFVRKQLEEIAVRFEQRRANAIAVKASR
DNRSSGSGSDSSSSSSSGSSSSGSSGRSSGVLNVSCGSGGKAAGRTLPLE
LQGSRGGGGGGGRGGKEGILGRGGLGARKRKSAGDEGGNGGMHKKARASV
RVPSSLCTRKRMAERDAKVEGREKGGLEEQRQKRARSVLVEEGQGGGIGM
EMEAVTASLFSAADIALFRQMMGVEGEVVGGVESEIEAIAKEEKRKKEAM
DGVSANPTAADDDKNISPMAVAEWRSRRGLSRIKLWI*
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Synonyms
Publications