NO29G00560, NO29G00560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO29G00560 vs. NCBI_GenBank
Match: EWM21277.1 (caltractin [Nannochloropsis gaditana]) HSP 1 Score: 332.8 bits (852), Expect = 7.100e-88 Identity = 173/191 (90.58%), Postives = 179/191 (93.72%), Query Frame = 0 Query: 1 MAASNSSSRFRQGAGMGSPLSRRPKAGGKGKGLDEEELEEIREAFNLFDTDGKMTIDVRELKAAFRALGFQVKKAEIRTLLQNIDKEAAATVTYDEFLDMAAPKVANRDEREEIHKVFALFDDDGTGGISFRNLKRVATELGEHLTDEELQEMIDEADRDQDGVINEEEFYRVMRKRGNTPLDDIDSDDEY 192 MA+ SSSRFRQGAG+GSP SRRPK G KGKGLDEEELEEIREAFNLFD+DGK TIDVRELKAAFRALGFQVKKAEIRT LQ IDKE AATVTYDEFLDMAAPKVANRDEREEI KVFALFDDDGTG ISFRNLKRVATELGE+LTDEELQEMIDEADRDQDGVINEEEF+RVMRKRGN PLDDIDSDD+Y Sbjct: 1 MASGISSSRFRQGAGLGSPPSRRPKPGAKGKGLDEEELEEIREAFNLFDSDGKGTIDVRELKAAFRALGFQVKKAEIRTFLQTIDKEMAATVTYDEFLDMAAPKVANRDEREEIQKVFALFDDDGTGAISFRNLKRVATELGENLTDEELQEMIDEADRDQDGVINEEEFFRVMRKRGNAPLDDIDSDDDY 191
BLAST of NO29G00560 vs. NCBI_GenBank
Match: XP_005854672.1 (caltractin, partial [Nannochloropsis gaditana CCMP526] >EKU21689.1 caltractin, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 263.1 bits (671), Expect = 6.900e-67 Identity = 139/154 (90.26%), Postives = 143/154 (92.86%), Query Frame = 0 Query: 1 MAASNSSSRFRQGAGMGSPLSRRPKAGGKGKGLDEEELEEIREAFNLFDTDGKMTIDVRELKAAFRALGFQVKKAEIRTLLQNIDKEAAATVTYDEFLDMAAPKVANRDEREEIHKVFALFDDDGTGGISFRNLKRVATELGEHLTDEELQEMI 155 MA+ SSSRFRQGAG+GSP SRRPK G KGKGLDEEELEEIREAFNLFD+DGK TIDVRELKAAFRALGFQVKKAEIRT LQ IDKE AATVTYDEFLDMAAPKVANRDEREEI KVFALFDDDGTG ISFRNLKRVATELGE+LTDEELQEMI Sbjct: 1 MASGISSSRFRQGAGLGSPPSRRPKPGAKGKGLDEEELEEIREAFNLFDSDGKGTIDVRELKAAFRALGFQVKKAEIRTFLQTIDKEMAATVTYDEFLDMAAPKVANRDEREEIQKVFALFDDDGTGAISFRNLKRVATELGENLTDEELQEMI 154
BLAST of NO29G00560 vs. NCBI_GenBank
Match: XP_009042554.1 (hypothetical protein AURANDRAFT_39492 [Aureococcus anophagefferens] >EGB02747.1 hypothetical protein AURANDRAFT_39492 [Aureococcus anophagefferens]) HSP 1 Score: 246.9 bits (629), Expect = 5.100e-62 Identity = 132/195 (67.69%), Postives = 156/195 (80.00%), Query Frame = 0 Query: 1 MAASN-----SSSRFRQGAGMGSPLSRRPKAGGKGKGLDEEELEEIREAFNLFDTDGKMTIDVRELKAAFRALGFQVKKAEIRTLLQNIDKEAAATVTYDEFLDMAAPKVANRDEREEIHKVFALFDDDGTGGISFRNLKRVATELGEHLTDEELQEMIDEADRDQDGVINEEEFYRVMRKRGNTPLDDIDSDDE 191 MAA N S SR G G SR PK G+ EEE+EEIREAFNLFDT+GK ID++ELKAAFRALGFQVKKAEIR ++Q++DKE++ TV +DEF++MA PK+ +RD REEI KVFALFDDD TG ISFRNLKRVA ELGE+LTDEELQEMIDEADRD DG+INE+EF+RVM+KRG+ PLDD+ SDD+ Sbjct: 1 MAARNRFGVESGSRALSGRPGGGRASRAPKRA----GVSEEEMEEIREAFNLFDTEGKGVIDIKELKAAFRALGFQVKKAEIRRMMQDVDKESSPTVLFDEFVEMATPKMQSRDTREEIMKVFALFDDDQTGAISFRNLKRVANELGENLTDEELQEMIDEADRDGDGMINEDEFFRVMKKRGDNPLDDLSSDDD 191
BLAST of NO29G00560 vs. NCBI_GenBank
Match: CBN74472.1 (putative: similar to centrin [Ectocarpus siliculosus]) HSP 1 Score: 245.4 bits (625), Expect = 1.500e-61 Identity = 129/187 (68.98%), Postives = 156/187 (83.42%), Query Frame = 0 Query: 6 SSSRFRQGAGMGSPLSRRPKAGGKGK-GLDEEELEEIREAFNLFDTDGKMTIDVRELKAAFRALGFQVKKAEIRTLLQNIDKEAAATVTYDEFLDMAAPKVANRDEREEIHKVFALFDDDGTGGISFRNLKRVATELGEHLTDEELQEMIDEADRDQDGVINEEEFYRVMRKRGNTPLDDIDSDDEY 192 ++ R RQG G G AGG+GK LDEE +EEI+EAF+LFDT+GK ID+RELKAAFRALGFQVKK EIR +L ++DKE AA+V++++F++M PKV RD ++EI K+FALFD+DGTGGISFRNLKRVATELGE+LTD+ELQEMIDEADRDQDGV+N +EFYRVMRKR PLDD+DSDDEY Sbjct: 3 TAPRQRQGRGRGG------AAGGRGKQTLDEESMEEIKEAFSLFDTEGKGAIDIRELKAAFRALGFQVKKQEIRGMLTDVDKEGAASVSFNDFVEMVTPKVLARDPKDEIMKIFALFDEDGTGGISFRNLKRVATELGENLTDDELQEMIDEADRDQDGVVNADEFYRVMRKR-EDPLDDLDSDDEY 182
BLAST of NO29G00560 vs. NCBI_GenBank
Match: XP_009517330.1 (hypothetical protein PHYSODRAFT_476233 [Phytophthora sojae] >ACH68466.1 calcium-dependent protein 5 [Phytophthora sojae] >EGZ30055.1 hypothetical protein PHYSODRAFT_476233 [Phytophthora sojae]) HSP 1 Score: 230.3 bits (586), Expect = 4.900e-57 Identity = 118/171 (69.01%), Postives = 139/171 (81.29%), Query Frame = 0 Query: 20 LSRRPKAGGKGKGLDEEELEEIREAFNLFDTDGKMTIDVRELKAAFRALGFQVKKAEIRTLLQNIDKEAAATVTYDEFLDMAAPKVANRDEREEIHKVFALFDDDGTGGISFRNLKRVATELGEHLTDEELQEMIDEADRDQDGVINEEEFYRVMRKRGNTPLDDIDSDDE 191 L R+PK K LDEE+LEEI+EAF+LFDTDG TIDVRELKAA RALGFQVKKAEIR ++ +IDK+ + + DEF++M K+ +RD REEI K+F LFDDD TG ISFRNLKRV TELGE LTDEE+QEMIDEADRD DG+INEEEF+RVM+KR PLDD+DSDD+ Sbjct: 13 LRRKPKP--VKKALDEEDLEEIKEAFHLFDTDGSGTIDVRELKAAMRALGFQVKKAEIRQMIADIDKDESGAINLDEFIEMMTGKMNSRDSREEIMKIFQLFDDDNTGKISFRNLKRVCTELGETLTDEEMQEMIDEADRDGDGLINEEEFFRVMKKRSGNPLDDLDSDDD 181
BLAST of NO29G00560 vs. NCBI_GenBank
Match: XP_008897137.1 (hypothetical protein PPTG_05358 [Phytophthora parasitica INRA-310] >ETI34175.1 hypothetical protein F443_19253 [Phytophthora parasitica P1569] >ETL81213.1 hypothetical protein L917_18407 [Phytophthora parasitica] >ETM34415.1 hypothetical protein L914_18494 [Phytophthora parasitica] >ETN17589.1 hypothetical protein PPTG_05358 [Phytophthora parasitica INRA-310] >ETO63059.1 hypothetical protein F444_19206 [Phytophthora parasitica P1976] >ETP04082.1 hypothetical protein F441_19068 [Phytophthora parasitica CJ01A1] >ETP32274.1 hypothetical protein F442_19030 [Phytophthora parasitica P10297] >KUF85775.1 Caltractin [Phytophthora nicotianae]) HSP 1 Score: 229.9 bits (585), Expect = 6.400e-57 Identity = 123/190 (64.74%), Postives = 150/190 (78.95%), Query Frame = 0 Query: 1 MAASNSSSRFRQGAGMGSPLSRRPKAGGKGKGLDEEELEEIREAFNLFDTDGKMTIDVRELKAAFRALGFQVKKAEIRTLLQNIDKEAAATVTYDEFLDMAAPKVANRDEREEIHKVFALFDDDGTGGISFRNLKRVATELGEHLTDEELQEMIDEADRDQDGVINEEEFYRVMRKRGNTPLDDIDSDDE 191 M+++ S+S F A + L R+PK K LDEE+LEEI+EAF+LFDTDG +IDVRELKAA RALGFQVKKAEIR ++ +IDK+ + T+ DEF++M K+ +RD REEI K+F LFDDD TG ISFRNLKRV TELGE LTDEE+QEMIDEADRD DG+INEEEF+RVM+KR PLDD+DSDD+ Sbjct: 1 MSSAMSASAF---ARSRAALRRKPKP--VKKALDEEDLEEIKEAFHLFDTDGSGSIDVRELKAAMRALGFQVKKAEIRQMIADIDKDESGTINLDEFIEMMTGKMNSRDSREEIMKIFQLFDDDNTGKISFRNLKRVCTELGETLTDEEMQEMIDEADRDGDGLINEEEFFRVMKKRSGNPLDDLDSDDD 185
BLAST of NO29G00560 vs. NCBI_GenBank
Match: XP_002907526.1 (caltractin [Phytophthora infestans T30-4] >EEY64090.1 caltractin [Phytophthora infestans T30-4]) HSP 1 Score: 229.9 bits (585), Expect = 6.400e-57 Identity = 118/171 (69.01%), Postives = 140/171 (81.87%), Query Frame = 0 Query: 20 LSRRPKAGGKGKGLDEEELEEIREAFNLFDTDGKMTIDVRELKAAFRALGFQVKKAEIRTLLQNIDKEAAATVTYDEFLDMAAPKVANRDEREEIHKVFALFDDDGTGGISFRNLKRVATELGEHLTDEELQEMIDEADRDQDGVINEEEFYRVMRKRGNTPLDDIDSDDE 191 L R+PK K LDEE+LEEI+EAF+LFDTDG +IDVRELKAA RALGFQVKKAEIR ++ +IDK+ + T+ DEF++M K+ +RD REEI K+F LFDDD TG ISFRNLKRV TELGE+LTDEE+QEMIDEADRD DG INEEEF+RVM+KR PLDD+DSDD+ Sbjct: 19 LRRKPKP--VKKVLDEEDLEEIKEAFHLFDTDGSGSIDVRELKAAMRALGFQVKKAEIRQMIADIDKDESGTINLDEFIEMMTGKMNSRDSREEIMKIFQLFDDDNTGKISFRNLKRVCTELGENLTDEEMQEMIDEADRDGDGFINEEEFFRVMKKRSGNPLDDLDSDDD 187
BLAST of NO29G00560 vs. NCBI_GenBank
Match: OWZ24286.1 (Caltractin [Phytophthora megakarya]) HSP 1 Score: 228.4 bits (581), Expect = 1.900e-56 Identity = 117/171 (68.42%), Postives = 139/171 (81.29%), Query Frame = 0 Query: 20 LSRRPKAGGKGKGLDEEELEEIREAFNLFDTDGKMTIDVRELKAAFRALGFQVKKAEIRTLLQNIDKEAAATVTYDEFLDMAAPKVANRDEREEIHKVFALFDDDGTGGISFRNLKRVATELGEHLTDEELQEMIDEADRDQDGVINEEEFYRVMRKRGNTPLDDIDSDDE 191 L R+PK K LDE++LEEI+EAF+LFDTDG +IDVRELKAA RALGFQVKKAEIR ++ +IDK+ + T+ DEF++M K+ +RD REEI K F LFDDD TG ISFRNLKRV TELGE LTDEE+QEMIDEADRD DG+INEEEF+RVM+KR PLDD+DSDD+ Sbjct: 13 LRRKPKP--VKKALDEDDLEEIKEAFHLFDTDGSGSIDVRELKAAMRALGFQVKKAEIRQMIADIDKDESGTINLDEFIEMMTGKMNSRDSREEIMKTFQLFDDDNTGKISFRNLKRVCTELGETLTDEEMQEMIDEADRDGDGLINEEEFFRVMKKRSGNPLDDLDSDDD 181
BLAST of NO29G00560 vs. NCBI_GenBank
Match: XP_002894861.1 (caltractin [Phytophthora infestans T30-4] >EEY64727.1 caltractin [Phytophthora infestans T30-4]) HSP 1 Score: 228.0 bits (580), Expect = 2.400e-56 Identity = 117/171 (68.42%), Postives = 139/171 (81.29%), Query Frame = 0 Query: 20 LSRRPKAGGKGKGLDEEELEEIREAFNLFDTDGKMTIDVRELKAAFRALGFQVKKAEIRTLLQNIDKEAAATVTYDEFLDMAAPKVANRDEREEIHKVFALFDDDGTGGISFRNLKRVATELGEHLTDEELQEMIDEADRDQDGVINEEEFYRVMRKRGNTPLDDIDSDDE 191 L R+PK K LDEE+LEEI+EAF+LFDTDG +IDVRELKAA RALGFQVKKAEIR ++ +IDK+ + T+ DEF++M K+ +RD REEI K+F LFDDD TG ISFRNLKRV TELGE+LTDEE+QEMIDEAD D DG INEEEF+RVM+KR PLDD+DSDD+ Sbjct: 13 LRRKPKP--VKKVLDEEDLEEIKEAFHLFDTDGSGSIDVRELKAAMRALGFQVKKAEIRQMIADIDKDESGTINLDEFIEMMTGKMNSRDSREEIMKIFQLFDDDNTGKISFRNLKRVCTELGENLTDEEMQEMIDEADHDGDGFINEEEFFRVMKKRSGNPLDDLDSDDD 181
BLAST of NO29G00560 vs. NCBI_GenBank
Match: ETK74545.1 (hypothetical protein L915_18679 [Phytophthora parasitica] >ETL27966.1 hypothetical protein L916_18584 [Phytophthora parasitica]) HSP 1 Score: 227.6 bits (579), Expect = 3.200e-56 Identity = 122/190 (64.21%), Postives = 149/190 (78.42%), Query Frame = 0 Query: 1 MAASNSSSRFRQGAGMGSPLSRRPKAGGKGKGLDEEELEEIREAFNLFDTDGKMTIDVRELKAAFRALGFQVKKAEIRTLLQNIDKEAAATVTYDEFLDMAAPKVANRDEREEIHKVFALFDDDGTGGISFRNLKRVATELGEHLTDEELQEMIDEADRDQDGVINEEEFYRVMRKRGNTPLDDIDSDDE 191 M+++ S+S F A + L R+PK K LDEE+LEEI+EAF+LFDTDG +IDVRELKAA RALGFQVKKAEIR ++ +IDK+ + T+ DEF++M K+ +RD REEI K+ LFDDD TG ISFRNLKRV TELGE LTDEE+QEMIDEADRD DG+INEEEF+RVM+KR PLDD+DSDD+ Sbjct: 1 MSSAMSASAF---ARSRAALRRKPKP--VKKALDEEDLEEIKEAFHLFDTDGSGSIDVRELKAAMRALGFQVKKAEIRQMIADIDKDESGTINLDEFIEMMTGKMNSRDSREEIMKILQLFDDDNTGKISFRNLKRVCTELGETLTDEEMQEMIDEADRDGDGLINEEEFFRVMKKRSGNPLDDLDSDDD 185 The following BLAST results are available for this feature:
BLAST of NO29G00560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G00560 ID=NO29G00560|Name=NO29G00560|organism=Nannochloropsis oceanica|type=gene|length=1809bpback to top protein sequence of NO29G00560.1 >NO29G00560.1-protein ID=NO29G00560.1-protein|Name=NO29G00560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=192bpback to top Synonyms
Publications
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